RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 PHF23Q9BUL5 403 aaPredicted RBP9.59□□□□□ -0.87
EXD1-201ENST00000314992 IGF1RP08069 1367 aa9.59□□□□□ -0.87
EXD1-201ENST00000314992 RGS17Q9UGC6 210 aaPredicted RBP9.57□□□□□ -0.88
EXD1-201ENST00000314992 C3P01024 1663 aa9.57□□□□□ -0.88
EXD1-201ENST00000314992 DENND4BO75064 1496 aaPredicted RBP9.56□□□□□ -0.88
EXD1-201ENST00000314992 HSPA1LP34931 641 aa9.56□□□□□ -0.88
EXD1-201ENST00000314992 TCOF1Q13428 1488 aaKnown RBP9.56□□□□□ -0.88
EXD1-201ENST00000314992 MROH2AA6NES4 1674 aa9.55□□□□□ -0.88
EXD1-201ENST00000314992 UBAP1LF5GYI3 381 aa9.54□□□□□ -0.88
EXD1-201ENST00000314992 AGLP35573 1532 aa9.53□□□□□ -0.88
EXD1-201ENST00000314992 NPATQ14207 1427 aa9.53□□□□□ -0.88
EXD1-201ENST00000314992 C9orf84Q5VXU9 1444 aa9.52□□□□□ -0.89
EXD1-201ENST00000314992 TRAPPC8Q9Y2L5 1435 aa9.52□□□□□ -0.89
EXD1-201ENST00000314992 PTPRKQ15262 1439 aa9.52□□□□□ -0.89
EXD1-201ENST00000314992 ATP10AO60312 1499 aa9.51□□□□□ -0.89
EXD1-201ENST00000314992 RAPGEF2Q9Y4G8 1499 aa9.51□□□□□ -0.89
EXD1-201ENST00000314992 CAMSAP1Q5T5Y3 1602 aa9.51□□□□□ -0.89
EXD1-201ENST00000314992 HECW1Q76N89 1606 aa9.5□□□□□ -0.89
EXD1-201ENST00000314992 RAPGEF3O95398 923 aa9.49□□□□□ -0.89
EXD1-201ENST00000314992 ARID4BQ4LE39 1312 aaPredicted RBP9.49□□□□□ -0.89
EXD1-201ENST00000314992 EEA1Q15075 1411 aa9.47□□□□□ -0.89
EXD1-201ENST00000314992 PKD2Q13563 968 aa9.47□□□□□ -0.89
EXD1-201ENST00000314992 GOLGA3Q08378 1498 aa9.46□□□□□ -0.89
EXD1-201ENST00000314992 ATP10BO94823 1461 aa9.46□□□□□ -0.9
EXD1-201ENST00000314992 SETD1AO15047 1707 aaKnown RBP9.46□□□□□ -0.9
EXD1-201ENST00000314992 KIF27Q86VH2 1401 aa9.45□□□□□ -0.9
EXD1-201ENST00000314992 CNTLNQ9NXG0 1405 aa9.45□□□□□ -0.9
EXD1-201ENST00000314992 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
EXD1-201ENST00000314992 SYNMO15061 1565 aa9.45□□□□□ -0.9
EXD1-201ENST00000314992 TOM1O60784 492 aa9.45□□□□□ -0.9
EXD1-201ENST00000314992 VWDEQ8N2E2 1590 aa9.44□□□□□ -0.9
EXD1-201ENST00000314992 CDK12Q9NYV4 1490 aaPredicted RBP9.43□□□□□ -0.9
EXD1-201ENST00000314992 KDM5CP41229 1560 aa9.43□□□□□ -0.9
EXD1-201ENST00000314992 CARMIL1Q5VZK9 1371 aa9.43□□□□□ -0.9
EXD1-201ENST00000314992 ZNF335Q9H4Z2 1342 aaPredicted RBP9.43□□□□□ -0.9
EXD1-201ENST00000314992 MYO3AQ8NEV4 1616 aa9.42□□□□□ -0.9
EXD1-201ENST00000314992 POLR1AO95602 1720 aaPredicted RBP9.41□□□□□ -0.9
EXD1-201ENST00000314992 SHANK2Q9UPX8 1470 aa9.41□□□□□ -0.9
EXD1-201ENST00000314992 UPF1Q92900 1129 aaKnown RBP eCLIP9.41□□□□□ -0.9
EXD1-201ENST00000314992 NEURL4Q96JN8 1562 aa9.4□□□□□ -0.9
EXD1-201ENST00000314992 CTTNBP2Q8WZ74 1663 aa9.4□□□□□ -0.9
EXD1-201ENST00000314992 SCAF1Q9H7N4 1312 aaKnown RBP9.4□□□□□ -0.9
EXD1-201ENST00000314992 POTEAQ6S8J7 498 aa9.39□□□□□ -0.91
EXD1-201ENST00000314992 LRP5O75197 1615 aa9.38□□□□□ -0.91
EXD1-201ENST00000314992 DIP2CQ9Y2E4 1556 aa9.38□□□□□ -0.91
EXD1-201ENST00000314992 CEP170BQ9Y4F5 1589 aaPredicted RBP9.38□□□□□ -0.91
EXD1-201ENST00000314992 DEPDC5O75140 1603 aa9.37□□□□□ -0.91
EXD1-201ENST00000314992 MED14O60244 1454 aa9.36□□□□□ -0.91
EXD1-201ENST00000314992 IFFO2Q5TF58 517 aa9.36□□□□□ -0.91
EXD1-201ENST00000314992 FAM9AQ8IZU1 332 aaPredicted RBP9.36□□□□□ -0.91
EXD1-201ENST00000314992 KCNH8Q96L42 1107 aa9.36□□□□□ -0.91
EXD1-201ENST00000314992 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.35□□□□□ -0.91
EXD1-201ENST00000314992 SUPT6HQ7KZ85 1726 aaKnown RBP9.35□□□□□ -0.91
EXD1-201ENST00000314992 CEBPAP49715 358 aaPredicted RBP9.33□□□□□ -0.92
EXD1-201ENST00000314992 LRRC7Q96NW7 1537 aa9.33□□□□□ -0.92
EXD1-201ENST00000314992 CEP162Q5TB80 1403 aa9.33□□□□□ -0.92
EXD1-201ENST00000314992 CDK13Q14004 1512 aaKnown RBP9.32□□□□□ -0.92
EXD1-201ENST00000314992 MLH3Q9UHC1 1453 aa9.32□□□□□ -0.92
EXD1-201ENST00000314992 FAM135BQ49AJ0 1406 aa9.32□□□□□ -0.92
EXD1-201ENST00000314992 RAPGEF6Q8TEU7 1601 aa9.32□□□□□ -0.92
EXD1-201ENST00000314992 DNMT1P26358 1616 aaKnown RBP9.31□□□□□ -0.92
EXD1-201ENST00000314992 NCKAP5LQ9HCH0 1330 aa9.3□□□□□ -0.92
EXD1-201ENST00000314992 A2ML1A8K2U0 1454 aa9.3□□□□□ -0.92
EXD1-201ENST00000314992 ABCA6Q8N139 1617 aa9.3□□□□□ -0.92
EXD1-201ENST00000314992 STRCP1A6NGW2 1772 aa9.3□□□□□ -0.92
EXD1-201ENST00000314992 PPP6R1Q9UPN7 881 aa9.29□□□□□ -0.92
EXD1-201ENST00000314992 ZNF518AQ6AHZ1 1483 aa9.29□□□□□ -0.92
EXD1-201ENST00000314992 PLCH2O75038 1416 aa9.28□□□□□ -0.92
EXD1-201ENST00000314992 SAMD9Q5K651 1589 aa9.28□□□□□ -0.92
EXD1-201ENST00000314992 CSRNP3Q8WYN3 585 aa9.28□□□□□ -0.92
EXD1-201ENST00000314992 MYT1Q01538 1121 aa9.27□□□□□ -0.93
EXD1-201ENST00000314992 XIRP1Q702N8 1843 aaKnown RBP9.27□□□□□ -0.93
EXD1-201ENST00000314992 FAM135AQ9P2D6 1515 aa9.26□□□□□ -0.93
EXD1-201ENST00000314992 SCAPERQ9BY12 1400 aa9.26□□□□□ -0.93
EXD1-201ENST00000314992 PIP4K2BP78356 416 aa9.25□□□□□ -0.93
EXD1-201ENST00000314992 NUP153P49790 1475 aaKnown RBP9.24□□□□□ -0.93
EXD1-201ENST00000314992 NHSL1Q5SYE7 1610 aa9.23□□□□□ -0.93
EXD1-201ENST00000314992 TTBK1Q5TCY1 1321 aaPredicted RBP9.23□□□□□ -0.93
EXD1-201ENST00000314992 KIF14Q15058 1648 aa9.23□□□□□ -0.93
EXD1-201ENST00000314992 ZC3H13Q5T200 1668 aaKnown RBP9.22□□□□□ -0.93
EXD1-201ENST00000314992 KDM5DQ9BY66 1539 aa9.22□□□□□ -0.93
EXD1-201ENST00000314992 CCER1Q8TC90 406 aaPredicted RBP9.22□□□□□ -0.93
EXD1-201ENST00000314992 IQGAP1P46940 1657 aa9.22□□□□□ -0.93
EXD1-201ENST00000314992 FOXD1Q16676 465 aa9.22□□□□□ -0.93
EXD1-201ENST00000314992 LRRC9Q6ZRR7 1453 aa9.22□□□□□ -0.93
EXD1-201ENST00000314992 MLECQ14165 292 aa9.21□□□□□ -0.93
EXD1-201ENST00000314992 PLXNC1O60486 1568 aa9.21□□□□□ -0.93
EXD1-201ENST00000314992 MYO5CQ9NQX4 1742 aa9.21□□□□□ -0.93
EXD1-201ENST00000314992 ACIN1Q9UKV3 1341 aaKnown RBP9.21□□□□□ -0.93
EXD1-201ENST00000314992 SETBP1Q9Y6X0 1596 aa9.21□□□□□ -0.94
EXD1-201ENST00000314992 ZMYM3Q14202 1370 aa9.2□□□□□ -0.94
EXD1-201ENST00000314992 SHPRHQ149N8 1683 aa9.2□□□□□ -0.94
EXD1-201ENST00000314992 PLPPR3Q6T4P5 718 aa9.19□□□□□ -0.94
EXD1-201ENST00000314992 KIDINS220Q9ULH0 1771 aa9.19□□□□□ -0.94
EXD1-201ENST00000314992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.19□□□□□ -0.94
EXD1-201ENST00000314992 CLTCQ00610 1675 aaKnown RBP9.18□□□□□ -0.94
EXD1-201ENST00000314992 FGD6Q6ZV73 1430 aa9.18□□□□□ -0.94
EXD1-201ENST00000314992 ITSN2Q9NZM3 1697 aa9.17□□□□□ -0.94
EXD1-201ENST00000314992 VPS8Q8N3P4 1428 aa9.17□□□□□ -0.94
EXD1-201ENST00000314992 NPHP4O75161 1426 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms