RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 CCDC7Q96M83 1385 aa14.93□□□□□ -0.02
PHTF2-203ENST00000307305 UACAQ9BZF9 1416 aa14.93□□□□□ -0.02
PHTF2-203ENST00000307305 CFTRP13569 1480 aa14.93□□□□□ -0.02
PHTF2-203ENST00000307305 ZBED9Q6R2W3 1325 aa14.93□□□□□ -0.02
PHTF2-203ENST00000307305 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
PHTF2-203ENST00000307305 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
PHTF2-203ENST00000307305 NESP48681 1621 aa14.91□□□□□ -0.02
PHTF2-203ENST00000307305 TIAM1Q13009 1591 aa14.91□□□□□ -0.02
PHTF2-203ENST00000307305 AKNAQ7Z591 1439 aa14.91□□□□□ -0.02
PHTF2-203ENST00000307305 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.9□□□□□ -0.02
PHTF2-203ENST00000307305 IPO9Q96P70 1041 aaKnown RBP14.9□□□□□ -0.02
PHTF2-203ENST00000307305 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
PHTF2-203ENST00000307305 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
PHTF2-203ENST00000307305 SKAP1Q86WV1 359 aa14.89□□□□□ -0.03
PHTF2-203ENST00000307305 CCDC146Q8IYE0 955 aa14.89□□□□□ -0.03
PHTF2-203ENST00000307305 MYOM3Q5VTT5 1437 aa14.88□□□□□ -0.03
PHTF2-203ENST00000307305 USP47Q96K76 1375 aa14.88□□□□□ -0.03
PHTF2-203ENST00000307305 FANCIQ9NVI1 1328 aa14.88□□□□□ -0.03
PHTF2-203ENST00000307305 ROCK2O75116 1388 aaKnown RBP14.88□□□□□ -0.03
PHTF2-203ENST00000307305 SPRYD3Q8NCJ5 442 aa14.88□□□□□ -0.03
PHTF2-203ENST00000307305 PDS5BQ9NTI5 1447 aa14.87□□□□□ -0.03
PHTF2-203ENST00000307305 ERICH6BQ5W0A0 696 aa14.87□□□□□ -0.03
PHTF2-203ENST00000307305 CDCA7LQ96GN5 454 aa14.87□□□□□ -0.03
PHTF2-203ENST00000307305 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.87□□□□□ -0.03
PHTF2-203ENST00000307305 MAPKBP1O60336 1514 aa14.87□□□□□ -0.03
PHTF2-203ENST00000307305 SLC24A1O60721 1099 aa14.86□□□□□ -0.03
PHTF2-203ENST00000307305 CASKIN1Q8WXD9 1431 aa14.84□□□□□ -0.03
PHTF2-203ENST00000307305 CNTLNQ9NXG0 1405 aa14.84□□□□□ -0.03
PHTF2-203ENST00000307305 SAFB2Q14151 953 aaKnown RBP eCLIP14.83□□□□□ -0.047e-6■□□□□ 10.4
PHTF2-203ENST00000307305 PDE4AP27815 886 aa14.82□□□□□ -0.04
PHTF2-203ENST00000307305 TMF1P82094 1093 aa14.82□□□□□ -0.04
PHTF2-203ENST00000307305 PANK3Q9H999 370 aa14.82□□□□□ -0.04
PHTF2-203ENST00000307305 KTN1Q86UP2 1357 aaKnown RBP14.82□□□□□ -0.04
PHTF2-203ENST00000307305 UPF2Q9HAU5 1272 aaKnown RBP14.82□□□□□ -0.04
PHTF2-203ENST00000307305 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.043e-7■■■■■ 36.6
PHTF2-203ENST00000307305 NAIPQ13075 1403 aa14.81□□□□□ -0.04
PHTF2-203ENST00000307305 CRBNQ96SW2 442 aa14.81□□□□□ -0.04
PHTF2-203ENST00000307305 HSP90AA1P07900 732 aaKnown RBP14.81□□□□□ -0.04
PHTF2-203ENST00000307305 RRP1P56182 461 aaKnown RBP14.81□□□□□ -0.04
PHTF2-203ENST00000307305 NLRP13Q86W25 1043 aa14.8□□□□□ -0.04
PHTF2-203ENST00000307305 PPM1GO15355 546 aaPredicted RBP14.8□□□□□ -0.04
PHTF2-203ENST00000307305 GAPVD1Q14C86 1478 aa14.8□□□□□ -0.04
PHTF2-203ENST00000307305 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
PHTF2-203ENST00000307305 PCF11O94913 1555 aaKnown RBP14.79□□□□□ -0.04
PHTF2-203ENST00000307305 PTPRKQ15262 1439 aa14.79□□□□□ -0.04
PHTF2-203ENST00000307305 DDRGK1Q96HY6 314 aa14.79□□□□□ -0.04
PHTF2-203ENST00000307305 SLKQ9H2G2 1235 aaPredicted RBP14.79□□□□□ -0.04
PHTF2-203ENST00000307305 ANKRD30AQ9BXX3 1397 aa14.78□□□□□ -0.04
PHTF2-203ENST00000307305 RALBP1Q15311 655 aa14.78□□□□□ -0.04
PHTF2-203ENST00000307305 HFM1A2PYH4 1435 aa14.78□□□□□ -0.04
PHTF2-203ENST00000307305 CLUAP1Q96AJ1 413 aa14.77□□□□□ -0.04
PHTF2-203ENST00000307305 JPH4Q96JJ6 628 aa14.77□□□□□ -0.04
PHTF2-203ENST00000307305 NBPF1Q3BBV0 1214 aa14.77□□□□□ -0.04
PHTF2-203ENST00000307305 TCERG1O14776 1098 aaKnown RBP14.77□□□□□ -0.05
PHTF2-203ENST00000307305 RRP7AQ9Y3A4 280 aaKnown RBP14.76□□□□□ -0.05
PHTF2-203ENST00000307305 MYBBP1AQ9BQG0 1328 aaKnown RBP14.76□□□□□ -0.05
PHTF2-203ENST00000307305 BCL2L13Q9BXK5 485 aa14.75□□□□□ -0.05
PHTF2-203ENST00000307305 NUTM2DQ5VT03 806 aaPredicted RBP14.74□□□□□ -0.05
PHTF2-203ENST00000307305 FYCO1Q9BQS8 1478 aa14.74□□□□□ -0.05
PHTF2-203ENST00000307305 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
PHTF2-203ENST00000307305 U2SURPO15042 1029 aaKnown RBP14.73□□□□□ -0.05
PHTF2-203ENST00000307305 PNISRQ8TF01 805 aaKnown RBP14.73□□□□□ -0.05
PHTF2-203ENST00000307305 KIF15Q9NS87 1388 aa14.72□□□□□ -0.05
PHTF2-203ENST00000307305 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
PHTF2-203ENST00000307305 ERCC6Q03468 1493 aa14.71□□□□□ -0.05
PHTF2-203ENST00000307305 GZF1Q9H116 711 aaPredicted RBP14.7□□□□□ -0.06
PHTF2-203ENST00000307305 CDK13Q14004 1512 aaKnown RBP14.7□□□□□ -0.06
PHTF2-203ENST00000307305 FTSJ3Q8IY81 847 aaKnown RBP14.69□□□□□ -0.06
PHTF2-203ENST00000307305 IL27Q8NEV9 243 aa14.69□□□□□ -0.06
PHTF2-203ENST00000307305 APAF1O14727 1248 aa14.69□□□□□ -0.06
PHTF2-203ENST00000307305 PLEKHG5O94827 1062 aa14.68□□□□□ -0.06
PHTF2-203ENST00000307305 GOLGA2Q08379 1002 aa14.68□□□□□ -0.06
PHTF2-203ENST00000307305 ADAMTS8Q9UP79 889 aa14.68□□□□□ -0.06
PHTF2-203ENST00000307305 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
PHTF2-203ENST00000307305 CDCA8Q53HL2 280 aa14.66□□□□□ -0.06
PHTF2-203ENST00000307305 BECN1Q14457 450 aa14.66□□□□□ -0.06
PHTF2-203ENST00000307305 STK26Q9P289 416 aa14.66□□□□□ -0.06
PHTF2-203ENST00000307305 PRDM2Q13029 1718 aa14.66□□□□□ -0.06
PHTF2-203ENST00000307305 PRG4Q92954 1404 aaPredicted RBP14.66□□□□□ -0.06
PHTF2-203ENST00000307305 TPRNQ4KMQ1 711 aa14.66□□□□□ -0.06
PHTF2-203ENST00000307305 GGT6Q6P531 493 aa14.65□□□□□ -0.06
PHTF2-203ENST00000307305 MORC1Q86VD1 984 aa14.65□□□□□ -0.06
PHTF2-203ENST00000307305 PEG3Q9GZU2 1588 aa14.65□□□□□ -0.06
PHTF2-203ENST00000307305 COG6Q9Y2V7 657 aa14.65□□□□□ -0.06
PHTF2-203ENST00000307305 BIVM-ERCC5R4GMW8 1640 aa14.63□□□□□ -0.07
PHTF2-203ENST00000307305 KIF3BO15066 747 aa14.62□□□□□ -0.07
PHTF2-203ENST00000307305 CCDC144AA2RUR9 1427 aa14.62□□□□□ -0.07
PHTF2-203ENST00000307305 ANKRD50Q9ULJ7 1429 aa14.62□□□□□ -0.07
PHTF2-203ENST00000307305 ARID4BQ4LE39 1312 aaPredicted RBP14.62□□□□□ -0.07
PHTF2-203ENST00000307305 TRAK1Q9UPV9 953 aa14.62□□□□□ -0.07
PHTF2-203ENST00000307305 U2AF1L5P0DN76 240 aaPredicted RBP14.61□□□□□ -0.07
PHTF2-203ENST00000307305 U2AF1Q01081 240 aaKnown RBP eCLIP14.61□□□□□ -0.071e-7■■■■■ 44.5
PHTF2-203ENST00000307305 C20orf194Q5TEA3 1177 aa14.61□□□□□ -0.07
PHTF2-203ENST00000307305 PDE3BQ13370 1112 aa14.61□□□□□ -0.07
PHTF2-203ENST00000307305 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
PHTF2-203ENST00000307305 CARMIL2Q6F5E8 1435 aa14.6□□□□□ -0.07
PHTF2-203ENST00000307305 CFAP53Q96M91 514 aa14.6□□□□□ -0.07
PHTF2-203ENST00000307305 ANKRD30BQ9BXX2 1392 aa14.6□□□□□ -0.07
PHTF2-203ENST00000307305 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
PHTF2-203ENST00000307305 ANO8Q9HCE9 1232 aaPredicted RBP14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms