RNA–Protein interactions for RNA: ENST00000307216.10

TMEM87A-201, Transcript of transmembrane protein 87A, humanhuman

TSL 1 (best) BASIC

Gene TMEM87A, Length 1,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-201ENST00000307216 SIN3AQ96ST3 1273 aa20.4■□□□□ 0.86
TMEM87A-201ENST00000307216 PLB1Q6P1J6 1458 aa20.4■□□□□ 0.86
TMEM87A-201ENST00000307216 PPP1R15AO75807 674 aaPredicted RBP20.39■□□□□ 0.85
TMEM87A-201ENST00000307216 NEUROD1Q13562 356 aa20.39■□□□□ 0.85
TMEM87A-201ENST00000307216 KIF14Q15058 1648 aa20.38■□□□□ 0.85
TMEM87A-201ENST00000307216 CROCC2H7BZ55 1655 aa20.37■□□□□ 0.85
TMEM87A-201ENST00000307216 ABCC5O15440 1437 aa20.35■□□□□ 0.85
TMEM87A-201ENST00000307216 CHD1O14646 1710 aa20.35■□□□□ 0.85
TMEM87A-201ENST00000307216 CAMSAP2Q08AD1 1489 aa20.34■□□□□ 0.85
TMEM87A-201ENST00000307216 SHROOM2Q13796 1616 aa20.33■□□□□ 0.85
TMEM87A-201ENST00000307216 GPATCH8Q9UKJ3 1502 aaKnown RBP20.33■□□□□ 0.85
TMEM87A-201ENST00000307216 PRG4Q92954 1404 aaPredicted RBP20.33■□□□□ 0.85
TMEM87A-201ENST00000307216 ADGRL2O95490 1459 aa20.32■□□□□ 0.84
TMEM87A-201ENST00000307216 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
TMEM87A-201ENST00000307216 CDC42BPAQ5VT25 1732 aa20.3■□□□□ 0.84
TMEM87A-201ENST00000307216 KDM6BO15054 1643 aa20.29■□□□□ 0.84
TMEM87A-201ENST00000307216 PLEKHD1A6NEE1 506 aa20.29■□□□□ 0.84
TMEM87A-201ENST00000307216 ARID3CA6NKF2 412 aa20.29■□□□□ 0.84
TMEM87A-201ENST00000307216 CHIC2Q9UKJ5 165 aa20.29■□□□□ 0.84
TMEM87A-201ENST00000307216 SHANK2Q9UPX8 1470 aa20.28■□□□□ 0.84
TMEM87A-201ENST00000307216 CFDP1Q9UEE9 299 aaPredicted RBP20.28■□□□□ 0.84
TMEM87A-201ENST00000307216 ATP10BO94823 1461 aa20.27■□□□□ 0.84
TMEM87A-201ENST00000307216 ABCC10Q5T3U5 1492 aa20.26■□□□□ 0.83
TMEM87A-201ENST00000307216 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
TMEM87A-201ENST00000307216 PTPRGP23470 1445 aa20.25■□□□□ 0.83
TMEM87A-201ENST00000307216 DENND4BO75064 1496 aaPredicted RBP20.24■□□□□ 0.83
TMEM87A-201ENST00000307216 MPHOSPH9Q99550 1183 aa20.23■□□□□ 0.83
TMEM87A-201ENST00000307216 KDM5BQ9UGL1 1544 aa20.22■□□□□ 0.83
TMEM87A-201ENST00000307216 ARHGEF5Q12774 1597 aa20.22■□□□□ 0.83
TMEM87A-201ENST00000307216 ANKRD30AQ9BXX3 1397 aa20.22■□□□□ 0.83
TMEM87A-201ENST00000307216 NCOA1Q15788 1441 aa20.21■□□□□ 0.83
TMEM87A-201ENST00000307216 YTHDC1Q96MU7 727 aaKnown RBP20.19■□□□□ 0.82
TMEM87A-201ENST00000307216 RPRD2Q5VT52 1461 aaKnown RBP20.17■□□□□ 0.82
TMEM87A-201ENST00000307216 GTF3C3Q9Y5Q9 886 aa20.17■□□□□ 0.82
TMEM87A-201ENST00000307216 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
TMEM87A-201ENST00000307216 ZNF644Q9H582 1327 aaPredicted RBP20.17■□□□□ 0.82
TMEM87A-201ENST00000307216 ANKRD30BQ9BXX2 1392 aa20.15■□□□□ 0.82
TMEM87A-201ENST00000307216 RSPH4AQ5TD94 716 aa20.13■□□□□ 0.81
TMEM87A-201ENST00000307216 ABCC2Q92887 1545 aa20.13■□□□□ 0.81
TMEM87A-201ENST00000307216 KDM5DQ9BY66 1539 aa20.11■□□□□ 0.81
TMEM87A-201ENST00000307216 PZPP20742 1482 aa20.1■□□□□ 0.81
TMEM87A-201ENST00000307216 C9orf84Q5VXU9 1444 aa20.1■□□□□ 0.81
TMEM87A-201ENST00000307216 CDC42BPBQ9Y5S2 1711 aa20.1■□□□□ 0.81
TMEM87A-201ENST00000307216 CLASP1Q7Z460 1538 aa20.09■□□□□ 0.81
TMEM87A-201ENST00000307216 ANKRD50Q9ULJ7 1429 aa20.09■□□□□ 0.81
TMEM87A-201ENST00000307216 SLC4A1APQ9BWU0 796 aaKnown RBP20.08■□□□□ 0.81
TMEM87A-201ENST00000307216 ZNF777Q9ULD5 760 aaPredicted RBP20.08■□□□□ 0.8
TMEM87A-201ENST00000307216 MAST1Q9Y2H9 1570 aa20.07■□□□□ 0.8
TMEM87A-201ENST00000307216 KIAA1107Q9UPP5 1409 aa20.07■□□□□ 0.8
TMEM87A-201ENST00000307216 CCDC141Q6ZP82 1450 aa20.07■□□□□ 0.8
TMEM87A-201ENST00000307216 PLEKHH2Q8IVE3 1493 aa20.07■□□□□ 0.8
TMEM87A-201ENST00000307216 TEX14Q8IWB6 1497 aa20.07■□□□□ 0.8
TMEM87A-201ENST00000307216 MYO5CQ9NQX4 1742 aa20.07■□□□□ 0.8
TMEM87A-201ENST00000307216 DDX10Q13206 875 aaKnown RBP20.07■□□□□ 0.8
TMEM87A-201ENST00000307216 UHRF1BP1LA0JNW5 1464 aa20.06■□□□□ 0.8
TMEM87A-201ENST00000307216 CCER2I3L3R5 266 aa20.06■□□□□ 0.8
TMEM87A-201ENST00000307216 TSPY4P0CV99 314 aa20.06■□□□□ 0.8
TMEM87A-201ENST00000307216 TSPY10P0CW01 314 aa20.06■□□□□ 0.8
TMEM87A-201ENST00000307216 SAMD9LQ8IVG5 1584 aa20.05■□□□□ 0.8
TMEM87A-201ENST00000307216 POLR1AO95602 1720 aaPredicted RBP20.03■□□□□ 0.8
TMEM87A-201ENST00000307216 ANP32CO43423 234 aa20.03■□□□□ 0.8
TMEM87A-201ENST00000307216 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
TMEM87A-201ENST00000307216 EIF4G2P78344 907 aaKnown RBP eCLIP20.02■□□□□ 0.8
TMEM87A-201ENST00000307216 PELP1Q8IZL8 1130 aaKnown RBP20■□□□□ 0.79
TMEM87A-201ENST00000307216 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
TMEM87A-201ENST00000307216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.99■□□□□ 0.79
TMEM87A-201ENST00000307216 PLXNC1O60486 1568 aa19.98■□□□□ 0.79
TMEM87A-201ENST00000307216 TTC37Q6PGP7 1564 aa19.98■□□□□ 0.79
TMEM87A-201ENST00000307216 ARHGAP5Q13017 1502 aa19.98■□□□□ 0.79
TMEM87A-201ENST00000307216 ZCCHC11Q5TAX3 1644 aaKnown RBP19.97■□□□□ 0.79
TMEM87A-201ENST00000307216 KIF15Q9NS87 1388 aa19.97■□□□□ 0.79
TMEM87A-201ENST00000307216 ARHGEF12Q9NZN5 1544 aa19.96■□□□□ 0.79
TMEM87A-201ENST00000307216 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
TMEM87A-201ENST00000307216 ARAP3Q8WWN8 1544 aa19.94■□□□□ 0.78
TMEM87A-201ENST00000307216 UNC13BO14795 1591 aa19.94■□□□□ 0.78
TMEM87A-201ENST00000307216 HSPA5P11021 654 aaKnown RBP19.93■□□□□ 0.78
TMEM87A-201ENST00000307216 SYCP2Q9BX26 1530 aa19.93■□□□□ 0.78
TMEM87A-201ENST00000307216 NUP155O75694 1391 aa19.91■□□□□ 0.78
TMEM87A-201ENST00000307216 PKD2Q13563 968 aa19.91■□□□□ 0.78
TMEM87A-201ENST00000307216 HIRIP3Q9BW71 556 aaPredicted RBP19.9■□□□□ 0.78
TMEM87A-201ENST00000307216 PLCH2O75038 1416 aa19.88■□□□□ 0.77
TMEM87A-201ENST00000307216 UHRF1BP1Q6BDS2 1440 aa19.88■□□□□ 0.77
TMEM87A-201ENST00000307216 HNRNPMP52272 730 aaKnown RBP eCLIP19.88■□□□□ 0.77
TMEM87A-201ENST00000307216 DMRT2Q9Y5R5 561 aa19.88■□□□□ 0.77
TMEM87A-201ENST00000307216 CNTLNQ9NXG0 1405 aa19.88■□□□□ 0.77
TMEM87A-201ENST00000307216 MAPK8IP2Q13387 824 aaPredicted RBP19.87■□□□□ 0.77
TMEM87A-201ENST00000307216 DUOX2Q9NRD8 1548 aa19.86■□□□□ 0.77
TMEM87A-201ENST00000307216 FAM135AQ9P2D6 1515 aa19.86■□□□□ 0.77
TMEM87A-201ENST00000307216 SPATA31E1Q6ZUB1 1445 aa19.86■□□□□ 0.77
TMEM87A-201ENST00000307216 IQGAP3Q86VI3 1631 aa19.85■□□□□ 0.77
TMEM87A-201ENST00000307216 WASHC2AQ641Q2 1341 aa19.84■□□□□ 0.77
TMEM87A-201ENST00000307216 ABCC1P33527 1531 aa19.84■□□□□ 0.77
TMEM87A-201ENST00000307216 CCDC7Q96M83 1385 aa19.83■□□□□ 0.77
TMEM87A-201ENST00000307216 ERBINQ96RT1 1412 aa19.83■□□□□ 0.77
TMEM87A-201ENST00000307216 NBPF8Q3BBV2 869 aa19.83■□□□□ 0.76
TMEM87A-201ENST00000307216 ARID4BQ4LE39 1312 aaPredicted RBP19.82■□□□□ 0.76
TMEM87A-201ENST00000307216 RALGAPBQ86X10 1494 aa19.82■□□□□ 0.76
TMEM87A-201ENST00000307216 EFCAB2Q5VUJ9 269 aa19.82■□□□□ 0.76
TMEM87A-201ENST00000307216 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
TMEM87A-201ENST00000307216 KDM5CP41229 1560 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms