RNA–Protein interactions for RNA: ENST00000306077.4

TMEM43-201, Transcript of transmembrane protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM43, Length 3,341 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM43-201ENST00000306077 TEX14Q8IWB6 1497 aa12.44□□□□□ -0.42
TMEM43-201ENST00000306077 ANP32EQ9BTT0 268 aa12.43□□□□□ -0.42
TMEM43-201ENST00000306077 DAPK1P53355 1430 aa12.43□□□□□ -0.42
TMEM43-201ENST00000306077 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
TMEM43-201ENST00000306077 ANP32CO43423 234 aa12.42□□□□□ -0.42
TMEM43-201ENST00000306077 GRIN2AQ12879 1464 aa12.42□□□□□ -0.42
TMEM43-201ENST00000306077 ZNF608Q9ULD9 1512 aaPredicted RBP12.41□□□□□ -0.42
TMEM43-201ENST00000306077 ADGRL2O95490 1459 aa12.41□□□□□ -0.42
TMEM43-201ENST00000306077 RPRD2Q5VT52 1461 aaKnown RBP12.41□□□□□ -0.42
TMEM43-201ENST00000306077 CEP170Q5SW79 1584 aa12.41□□□□□ -0.42
TMEM43-201ENST00000306077 MBD5Q9P267 1494 aa12.41□□□□□ -0.42
TMEM43-201ENST00000306077 ARID3CA6NKF2 412 aa12.4□□□□□ -0.42
TMEM43-201ENST00000306077 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.42
TMEM43-201ENST00000306077 ABCC5O15440 1437 aa12.4□□□□□ -0.43
TMEM43-201ENST00000306077 MAGI1Q96QZ7 1491 aaPredicted RBP12.39□□□□□ -0.43
TMEM43-201ENST00000306077 NCOA1Q15788 1441 aa12.37□□□□□ -0.43
TMEM43-201ENST00000306077 KIF14Q15058 1648 aa12.37□□□□□ -0.43
TMEM43-201ENST00000306077 ANKRD30BQ9BXX2 1392 aa12.37□□□□□ -0.43
TMEM43-201ENST00000306077 HNRNPUQ00839 825 aaKnown RBP eCLIP12.37□□□□□ -0.43
TMEM43-201ENST00000306077 SPATA31E1Q6ZUB1 1445 aa12.37□□□□□ -0.43
TMEM43-201ENST00000306077 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
TMEM43-201ENST00000306077 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
TMEM43-201ENST00000306077 PZPP20742 1482 aa12.36□□□□□ -0.43
TMEM43-201ENST00000306077 KDM5DQ9BY66 1539 aa12.36□□□□□ -0.43
TMEM43-201ENST00000306077 RBM19Q9Y4C8 960 aaKnown RBP12.36□□□□□ -0.43
TMEM43-201ENST00000306077 ABCA8O94911 1581 aa12.35□□□□□ -0.43
TMEM43-201ENST00000306077 CNTLNQ9NXG0 1405 aa12.35□□□□□ -0.43
TMEM43-201ENST00000306077 CAMSAP2Q08AD1 1489 aa12.35□□□□□ -0.43
TMEM43-201ENST00000306077 CHIC2Q9UKJ5 165 aa12.34□□□□□ -0.43
TMEM43-201ENST00000306077 TROQ12816 1431 aaPredicted RBP12.33□□□□□ -0.43
TMEM43-201ENST00000306077 NUP160Q12769 1436 aa12.33□□□□□ -0.44
TMEM43-201ENST00000306077 SHANK2Q9UPX8 1470 aa12.33□□□□□ -0.44
TMEM43-201ENST00000306077 SYNJ2O15056 1496 aa12.32□□□□□ -0.44
TMEM43-201ENST00000306077 WASHC2AQ641Q2 1341 aa12.32□□□□□ -0.44
TMEM43-201ENST00000306077 GPATCH8Q9UKJ3 1502 aaKnown RBP12.31□□□□□ -0.44
TMEM43-201ENST00000306077 KDM5CP41229 1560 aa12.31□□□□□ -0.44
TMEM43-201ENST00000306077 BCORL1Q5H9F3 1711 aa12.3□□□□□ -0.44
TMEM43-201ENST00000306077 E9PCH4 1651 aa12.3□□□□□ -0.44
TMEM43-201ENST00000306077 MPHOSPH9Q99550 1183 aa12.3□□□□□ -0.44
TMEM43-201ENST00000306077 ABCC10Q5T3U5 1492 aa12.3□□□□□ -0.44
TMEM43-201ENST00000306077 ARHGEF5Q12774 1597 aa12.3□□□□□ -0.44
TMEM43-201ENST00000306077 FAM9BQ8IZU0 186 aa12.29□□□□□ -0.44
TMEM43-201ENST00000306077 BCL11AQ9H165 835 aa12.28□□□□□ -0.44
TMEM43-201ENST00000306077 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
TMEM43-201ENST00000306077 RRP7BPQ9NSQ0 103 aa12.27□□□□□ -0.45
TMEM43-201ENST00000306077 HSPA5P11021 654 aaKnown RBP12.27□□□□□ -0.45
TMEM43-201ENST00000306077 ARHGEF12Q9NZN5 1544 aa12.27□□□□□ -0.45
TMEM43-201ENST00000306077 UHRF1BP1Q6BDS2 1440 aa12.26□□□□□ -0.45
TMEM43-201ENST00000306077 PREX2Q70Z35 1606 aa12.25□□□□□ -0.45
TMEM43-201ENST00000306077 PLB1Q6P1J6 1458 aa12.24□□□□□ -0.45
TMEM43-201ENST00000306077 CDC42BPBQ9Y5S2 1711 aa12.24□□□□□ -0.45
TMEM43-201ENST00000306077 PRG4Q92954 1404 aaPredicted RBP12.24□□□□□ -0.45
TMEM43-201ENST00000306077 CDK11AQ9UQ88 783 aaPredicted RBP12.24□□□□□ -0.45
TMEM43-201ENST00000306077 PTPRGP23470 1445 aa12.23□□□□□ -0.45
TMEM43-201ENST00000306077 KIAA1107Q9UPP5 1409 aa12.23□□□□□ -0.45
TMEM43-201ENST00000306077 MAST1Q9Y2H9 1570 aa12.23□□□□□ -0.45
TMEM43-201ENST00000306077 FOXD1Q16676 465 aa12.22□□□□□ -0.45
TMEM43-201ENST00000306077 L3MBTL2Q969R5 705 aa12.22□□□□□ -0.45
TMEM43-201ENST00000306077 SHROOM2Q13796 1616 aa12.22□□□□□ -0.45
TMEM43-201ENST00000306077 EIF4G2P78344 907 aaKnown RBP eCLIP12.22□□□□□ -0.45
TMEM43-201ENST00000306077 LAMC1P11047 1609 aa12.22□□□□□ -0.45
TMEM43-201ENST00000306077 RALGAPBQ86X10 1494 aa12.21□□□□□ -0.45
TMEM43-201ENST00000306077 UNC13BO14795 1591 aa12.21□□□□□ -0.45
TMEM43-201ENST00000306077 ZNF326Q5BKZ1 582 aaKnown RBP12.21□□□□□ -0.45
TMEM43-201ENST00000306077 FBLN2P98095 1184 aa12.21□□□□□ -0.46
TMEM43-201ENST00000306077 NBPF8Q3BBV2 869 aa12.2□□□□□ -0.46
TMEM43-201ENST00000306077 B4GALNT3Q6L9W6 998 aa12.19□□□□□ -0.46
TMEM43-201ENST00000306077 C11orf95C9JLR9 678 aaPredicted RBP12.19□□□□□ -0.46
TMEM43-201ENST00000306077 ZNF644Q9H582 1327 aaPredicted RBP12.19□□□□□ -0.46
TMEM43-201ENST00000306077 SAMD9LQ8IVG5 1584 aa12.19□□□□□ -0.46
TMEM43-201ENST00000306077 DHX29Q7Z478 1369 aaKnown RBP12.19□□□□□ -0.46
TMEM43-201ENST00000306077 TRPM1Q7Z4N2 1603 aa12.18□□□□□ -0.46
TMEM43-201ENST00000306077 ERICH6BQ5W0A0 696 aa12.17□□□□□ -0.46
TMEM43-201ENST00000306077 ATP10BO94823 1461 aa12.17□□□□□ -0.46
TMEM43-201ENST00000306077 CARMIL2Q6F5E8 1435 aa12.17□□□□□ -0.46
TMEM43-201ENST00000306077 CCDC184Q52MB2 194 aa12.17□□□□□ -0.46
TMEM43-201ENST00000306077 CHMP7Q8WUX9 453 aaPredicted RBP12.17□□□□□ -0.46
TMEM43-201ENST00000306077 MSH5O43196 834 aa12.17□□□□□ -0.46
TMEM43-201ENST00000306077 PLXNC1O60486 1568 aa12.17□□□□□ -0.46
TMEM43-201ENST00000306077 MYO5CQ9NQX4 1742 aa12.16□□□□□ -0.46
TMEM43-201ENST00000306077 PRKRIP1Q9H875 184 aaPredicted RBP12.16□□□□□ -0.46
TMEM43-201ENST00000306077 NBR1Q14596 966 aa12.16□□□□□ -0.46
TMEM43-201ENST00000306077 ARID4BQ4LE39 1312 aaPredicted RBP12.15□□□□□ -0.46
TMEM43-201ENST00000306077 KIF7Q2M1P5 1343 aa12.15□□□□□ -0.46
TMEM43-201ENST00000306077 IQGAP3Q86VI3 1631 aa12.14□□□□□ -0.47
TMEM43-201ENST00000306077 ANKRD30AQ9BXX3 1397 aa12.14□□□□□ -0.47
TMEM43-201ENST00000306077 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
TMEM43-201ENST00000306077 CHD1O14646 1710 aa12.14□□□□□ -0.47
TMEM43-201ENST00000306077 C9orf84Q5VXU9 1444 aa12.14□□□□□ -0.47
TMEM43-201ENST00000306077 ANKRD50Q9ULJ7 1429 aa12.14□□□□□ -0.47
TMEM43-201ENST00000306077 ZBED9Q6R2W3 1325 aa12.13□□□□□ -0.47
TMEM43-201ENST00000306077 SALL2Q9Y467 1007 aaPredicted RBP12.13□□□□□ -0.47
TMEM43-201ENST00000306077 MAGI2Q86UL8 1455 aa12.12□□□□□ -0.47
TMEM43-201ENST00000306077 RNF17Q9BXT8 1623 aaKnown RBP12.12□□□□□ -0.47
TMEM43-201ENST00000306077 TTC37Q6PGP7 1564 aa12.1□□□□□ -0.47
TMEM43-201ENST00000306077 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
TMEM43-201ENST00000306077 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
TMEM43-201ENST00000306077 CCDC141Q6ZP82 1450 aa12.09□□□□□ -0.47
TMEM43-201ENST00000306077 CFDP1Q9UEE9 299 aaPredicted RBP12.09□□□□□ -0.47
TMEM43-201ENST00000306077 USP47Q96K76 1375 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms