RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

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Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 GCC2Q8IWJ2 1684 aa22.88■■□□□ 1.25
LONRF3-201ENST00000304778 AKNAQ7Z591 1439 aa22.88■■□□□ 1.25
LONRF3-201ENST00000304778 KIF14Q15058 1648 aa22.87■■□□□ 1.25
LONRF3-201ENST00000304778 DAPK1P53355 1430 aa22.87■■□□□ 1.25
LONRF3-201ENST00000304778 ATP10BO94823 1461 aa22.86■■□□□ 1.25
LONRF3-201ENST00000304778 ABCC5O15440 1437 aa22.85■■□□□ 1.25
LONRF3-201ENST00000304778 PTPRGP23470 1445 aa22.85■■□□□ 1.25
LONRF3-201ENST00000304778 ADCY10Q96PN6 1610 aa22.85■■□□□ 1.25
LONRF3-201ENST00000304778 KDM6BO15054 1643 aa22.84■■□□□ 1.25
LONRF3-201ENST00000304778 DNMT1P26358 1616 aaKnown RBP22.83■■□□□ 1.25
LONRF3-201ENST00000304778 GPATCH8Q9UKJ3 1502 aaKnown RBP22.83■■□□□ 1.25
LONRF3-201ENST00000304778 PLEKHD1A6NEE1 506 aa22.83■■□□□ 1.25
LONRF3-201ENST00000304778 CFDP1Q9UEE9 299 aaPredicted RBP22.83■■□□□ 1.25
LONRF3-201ENST00000304778 PPP1R15AO75807 674 aaPredicted RBP22.8■■□□□ 1.24
LONRF3-201ENST00000304778 TRIM52Q96A61 297 aa22.8■■□□□ 1.24
LONRF3-201ENST00000304778 ITSN2Q9NZM3 1697 aa22.8■■□□□ 1.24
LONRF3-201ENST00000304778 ROCK1Q13464 1354 aa22.79■■□□□ 1.24
LONRF3-201ENST00000304778 CAMSAP2Q08AD1 1489 aa22.79■■□□□ 1.24
LONRF3-201ENST00000304778 DDX10Q13206 875 aaKnown RBP22.79■■□□□ 1.24
LONRF3-201ENST00000304778 ZNF777Q9ULD5 760 aaPredicted RBP22.77■■□□□ 1.24
LONRF3-201ENST00000304778 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
LONRF3-201ENST00000304778 TONSLQ96HA7 1378 aa22.75■■□□□ 1.23
LONRF3-201ENST00000304778 DENND4BO75064 1496 aaPredicted RBP22.74■■□□□ 1.23
LONRF3-201ENST00000304778 FKBP8Q14318 412 aa22.73■■□□□ 1.23
LONRF3-201ENST00000304778 ABCC10Q5T3U5 1492 aa22.73■■□□□ 1.23
LONRF3-201ENST00000304778 ERCC6L2Q5T890 1561 aa22.71■■□□□ 1.23
LONRF3-201ENST00000304778 MPHOSPH9Q99550 1183 aa22.71■■□□□ 1.23
LONRF3-201ENST00000304778 HIRIP3Q9BW71 556 aaPredicted RBP22.71■■□□□ 1.23
LONRF3-201ENST00000304778 CDC42BPAQ5VT25 1732 aa22.7■■□□□ 1.22
LONRF3-201ENST00000304778 NCOA1Q15788 1441 aa22.65■■□□□ 1.22
LONRF3-201ENST00000304778 CCER2I3L3R5 266 aa22.63■■□□□ 1.21
LONRF3-201ENST00000304778 FOXD1Q16676 465 aa22.63■■□□□ 1.21
LONRF3-201ENST00000304778 CROCC2H7BZ55 1655 aa22.63■■□□□ 1.21
LONRF3-201ENST00000304778 PRKCSHP14314 528 aaPredicted RBP22.63■■□□□ 1.21
LONRF3-201ENST00000304778 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
LONRF3-201ENST00000304778 ADGBQ8N7X0 1667 aa22.62■■□□□ 1.21
LONRF3-201ENST00000304778 ADGRL2O95490 1459 aa22.61■■□□□ 1.21
LONRF3-201ENST00000304778 KDM5BQ9UGL1 1544 aa22.61■■□□□ 1.21
LONRF3-201ENST00000304778 RBM19Q9Y4C8 960 aaKnown RBP22.61■■□□□ 1.21
LONRF3-201ENST00000304778 ANP32CO43423 234 aa22.59■■□□□ 1.21
LONRF3-201ENST00000304778 ABCC2Q92887 1545 aa22.58■■□□□ 1.21
LONRF3-201ENST00000304778 ANKRD30AQ9BXX3 1397 aa22.58■■□□□ 1.21
LONRF3-201ENST00000304778 SLC4A1APQ9BWU0 796 aaKnown RBP22.56■■□□□ 1.2
LONRF3-201ENST00000304778 HNRNPMP52272 730 aaKnown RBP eCLIP22.55■■□□□ 1.2
LONRF3-201ENST00000304778 ANKRD30BQ9BXX2 1392 aa22.54■■□□□ 1.2
LONRF3-201ENST00000304778 C9orf84Q5VXU9 1444 aa22.54■■□□□ 1.2
LONRF3-201ENST00000304778 SHANK2Q9UPX8 1470 aa22.53■■□□□ 1.2
LONRF3-201ENST00000304778 CDC42BPBQ9Y5S2 1711 aa22.52■■□□□ 1.2
LONRF3-201ENST00000304778 PZPP20742 1482 aa22.52■■□□□ 1.2
LONRF3-201ENST00000304778 PREX2Q70Z35 1606 aa22.52■■□□□ 1.2
LONRF3-201ENST00000304778 TSPY4P0CV99 314 aa22.51■■□□□ 1.19
LONRF3-201ENST00000304778 TSPY10P0CW01 314 aa22.51■■□□□ 1.19
LONRF3-201ENST00000304778 ANKRD50Q9ULJ7 1429 aa22.5■■□□□ 1.19
LONRF3-201ENST00000304778 SAMD9LQ8IVG5 1584 aa22.5■■□□□ 1.19
LONRF3-201ENST00000304778 MBD5Q9P267 1494 aa22.5■■□□□ 1.19
LONRF3-201ENST00000304778 TTC37Q6PGP7 1564 aa22.49■■□□□ 1.19
LONRF3-201ENST00000304778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.49■■□□□ 1.19
LONRF3-201ENST00000304778 ARHGEF5Q12774 1597 aa22.48■■□□□ 1.19
LONRF3-201ENST00000304778 L3MBTL2Q969R5 705 aa22.48■■□□□ 1.19
LONRF3-201ENST00000304778 RPRD2Q5VT52 1461 aaKnown RBP22.46■■□□□ 1.19
LONRF3-201ENST00000304778 UHRF1BP1LA0JNW5 1464 aa22.45■■□□□ 1.18
LONRF3-201ENST00000304778 ZCCHC11Q5TAX3 1644 aaKnown RBP22.44■■□□□ 1.18
LONRF3-201ENST00000304778 ARHGAP5Q13017 1502 aa22.44■■□□□ 1.18
LONRF3-201ENST00000304778 MSH5O43196 834 aa22.44■■□□□ 1.18
LONRF3-201ENST00000304778 CCDC141Q6ZP82 1450 aa22.44■■□□□ 1.18
LONRF3-201ENST00000304778 KIF15Q9NS87 1388 aa22.42■■□□□ 1.18
LONRF3-201ENST00000304778 RSPH4AQ5TD94 716 aa22.41■■□□□ 1.18
LONRF3-201ENST00000304778 KIAA1107Q9UPP5 1409 aa22.4■■□□□ 1.18
LONRF3-201ENST00000304778 PKD2Q13563 968 aa22.4■■□□□ 1.18
LONRF3-201ENST00000304778 SYCP2Q9BX26 1530 aa22.4■■□□□ 1.18
LONRF3-201ENST00000304778 IRX6P78412 446 aaPredicted RBP22.39■■□□□ 1.17
LONRF3-201ENST00000304778 NUP155O75694 1391 aa22.39■■□□□ 1.17
LONRF3-201ENST00000304778 NEFLP07196 543 aa22.38■■□□□ 1.17
LONRF3-201ENST00000304778 MYO5CQ9NQX4 1742 aa22.38■■□□□ 1.17
LONRF3-201ENST00000304778 TEX14Q8IWB6 1497 aa22.38■■□□□ 1.17
LONRF3-201ENST00000304778 HSPA5P11021 654 aaKnown RBP22.35■■□□□ 1.17
LONRF3-201ENST00000304778 WASHC2AQ641Q2 1341 aa22.34■■□□□ 1.17
LONRF3-201ENST00000304778 NBPF8Q3BBV2 869 aa22.34■■□□□ 1.17
LONRF3-201ENST00000304778 PLCH2O75038 1416 aa22.33■■□□□ 1.17
LONRF3-201ENST00000304778 KDM5DQ9BY66 1539 aa22.32■■□□□ 1.16
LONRF3-201ENST00000304778 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
LONRF3-201ENST00000304778 PLEKHH2Q8IVE3 1493 aa22.31■■□□□ 1.16
LONRF3-201ENST00000304778 EIF4G2P78344 907 aaKnown RBP eCLIP22.3■■□□□ 1.16
LONRF3-201ENST00000304778 MAST1Q9Y2H9 1570 aa22.3■■□□□ 1.16
LONRF3-201ENST00000304778 ARHGEF12Q9NZN5 1544 aa22.3■■□□□ 1.16
LONRF3-201ENST00000304778 EFCAB2Q5VUJ9 269 aa22.28■■□□□ 1.16
LONRF3-201ENST00000304778 CNTLNQ9NXG0 1405 aa22.27■■□□□ 1.16
LONRF3-201ENST00000304778 ERICH6Q7L0X2 663 aa22.25■■□□□ 1.15
LONRF3-201ENST00000304778 HNRNPUQ00839 825 aaKnown RBP eCLIP22.22■■□□□ 1.15
LONRF3-201ENST00000304778 FAM135AQ9P2D6 1515 aa22.22■■□□□ 1.15
LONRF3-201ENST00000304778 PLXNC1O60486 1568 aa22.21■■□□□ 1.15
LONRF3-201ENST00000304778 WDR7Q9Y4E6 1490 aa22.21■■□□□ 1.15
LONRF3-201ENST00000304778 POLR1AO95602 1720 aaPredicted RBP22.21■■□□□ 1.15
LONRF3-201ENST00000304778 ABCC1P33527 1531 aa22.21■■□□□ 1.15
LONRF3-201ENST00000304778 CCDC7Q96M83 1385 aa22.19■■□□□ 1.14
LONRF3-201ENST00000304778 TRAPPC8Q9Y2L5 1435 aa22.19■■□□□ 1.14
LONRF3-201ENST00000304778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.18■■□□□ 1.14
LONRF3-201ENST00000304778 FANCIQ9NVI1 1328 aa22.17■■□□□ 1.14
LONRF3-201ENST00000304778 UNC13BO14795 1591 aa22.17■■□□□ 1.14
LONRF3-201ENST00000304778 ZNF326Q5BKZ1 582 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms