RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
MMP3-201ENST00000299855 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
MMP3-201ENST00000299855 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
MMP3-201ENST00000299855 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
MMP3-201ENST00000299855 BRPF3Q9ULD4 1205 aa12.63□□□□□ -0.39
MMP3-201ENST00000299855 CLIP1P30622 1438 aa12.62□□□□□ -0.39
MMP3-201ENST00000299855 ZNF428Q96B54 188 aa12.62□□□□□ -0.39
MMP3-201ENST00000299855 ZFP91Q96JP5 570 aaPredicted RBP12.62□□□□□ -0.39
MMP3-201ENST00000299855 DHX57Q6P158 1386 aaKnown RBP12.62□□□□□ -0.39
MMP3-201ENST00000299855 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
MMP3-201ENST00000299855 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
MMP3-201ENST00000299855 SNAPC4Q5SXM2 1469 aa12.6□□□□□ -0.39
MMP3-201ENST00000299855 NEUROD2Q15784 382 aa12.6□□□□□ -0.39
MMP3-201ENST00000299855 USP35Q9P2H5 1018 aa12.6□□□□□ -0.39
MMP3-201ENST00000299855 ARHGEF11O15085 1522 aa12.6□□□□□ -0.39
MMP3-201ENST00000299855 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
MMP3-201ENST00000299855 IRX6P78412 446 aaPredicted RBP12.59□□□□□ -0.39
MMP3-201ENST00000299855 CERS3Q8IU89 383 aa12.58□□□□□ -0.4
MMP3-201ENST00000299855 SYNJ1O43426 1573 aa12.58□□□□□ -0.4
MMP3-201ENST00000299855 MAGI1Q96QZ7 1491 aaPredicted RBP12.58□□□□□ -0.4
MMP3-201ENST00000299855 CWC22Q9HCG8 908 aaKnown RBP12.57□□□□□ -0.4
MMP3-201ENST00000299855 AAMPQ13685 434 aa12.57□□□□□ -0.4
MMP3-201ENST00000299855 ABCA10Q8WWZ4 1543 aa12.55□□□□□ -0.4
MMP3-201ENST00000299855 FOXD4L5Q5VV16 416 aaPredicted RBP12.55□□□□□ -0.4
MMP3-201ENST00000299855 FOXD4L4Q8WXT5 416 aaPredicted RBP12.55□□□□□ -0.4
MMP3-201ENST00000299855 GAPVD1Q14C86 1478 aa12.55□□□□□ -0.4
MMP3-201ENST00000299855 CHMP7Q8WUX9 453 aaPredicted RBP12.55□□□□□ -0.4
MMP3-201ENST00000299855 ARID4BQ4LE39 1312 aaPredicted RBP12.55□□□□□ -0.4
MMP3-201ENST00000299855 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
MMP3-201ENST00000299855 A0A0U1RQG5 324 aaPredicted RBP12.54□□□□□ -0.4
MMP3-201ENST00000299855 SYNJ2O15056 1496 aa12.53□□□□□ -0.4
MMP3-201ENST00000299855 TOP2BQ02880 1626 aa12.53□□□□□ -0.4
MMP3-201ENST00000299855 PBRM1Q86U86 1689 aa12.53□□□□□ -0.4
MMP3-201ENST00000299855 ARID3CA6NKF2 412 aa12.53□□□□□ -0.4
MMP3-201ENST00000299855 ABCA5Q8WWZ7 1642 aa12.52□□□□□ -0.4
MMP3-201ENST00000299855 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.4
MMP3-201ENST00000299855 CLASP1Q7Z460 1538 aa12.51□□□□□ -0.41
MMP3-201ENST00000299855 APBB1O00213 710 aa12.5□□□□□ -0.41
MMP3-201ENST00000299855 PPM1GO15355 546 aaPredicted RBP12.5□□□□□ -0.41
MMP3-201ENST00000299855 TMCO4Q5TGY1 634 aa12.5□□□□□ -0.41
MMP3-201ENST00000299855 E9PSI1 815 aa12.5□□□□□ -0.41
MMP3-201ENST00000299855 CYB5RLQ6IPT4 315 aa12.49□□□□□ -0.41
MMP3-201ENST00000299855 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
MMP3-201ENST00000299855 NCLP19338 710 aaKnown RBP12.49□□□□□ -0.41
MMP3-201ENST00000299855 ARAP1Q96P48 1450 aa12.49□□□□□ -0.41
MMP3-201ENST00000299855 RRBP1Q9P2E9 1410 aaKnown RBP12.48□□□□□ -0.41
MMP3-201ENST00000299855 RBM19Q9Y4C8 960 aaKnown RBP12.48□□□□□ -0.41
MMP3-201ENST00000299855 VASPP50552 380 aaPredicted RBP12.47□□□□□ -0.41
MMP3-201ENST00000299855 TMED8Q6PL24 325 aaPredicted RBP12.47□□□□□ -0.41
MMP3-201ENST00000299855 MFAP1P55081 439 aaKnown RBP12.46□□□□□ -0.41
MMP3-201ENST00000299855 ATXN8OSP0DMR3 200 aa12.45□□□□□ -0.42
MMP3-201ENST00000299855 MYT1LQ9UL68 1186 aa12.44□□□□□ -0.42
MMP3-201ENST00000299855 RAPGEF2Q9Y4G8 1499 aa12.43□□□□□ -0.42
MMP3-201ENST00000299855 ADAMTS12P58397 1594 aa12.43□□□□□ -0.42
MMP3-201ENST00000299855 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
MMP3-201ENST00000299855 CCER2I3L3R5 266 aa12.42□□□□□ -0.42
MMP3-201ENST00000299855 TRAIPQ9BWF2 469 aa12.42□□□□□ -0.42
MMP3-201ENST00000299855 GRIN2AQ12879 1464 aa12.42□□□□□ -0.42
MMP3-201ENST00000299855 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
MMP3-201ENST00000299855 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
MMP3-201ENST00000299855 SETQ01105 290 aaPredicted RBP12.4□□□□□ -0.42
MMP3-201ENST00000299855 PRDM16Q9HAZ2 1276 aa12.4□□□□□ -0.42
MMP3-201ENST00000299855 FANCIQ9NVI1 1328 aa12.4□□□□□ -0.43
MMP3-201ENST00000299855 TEX2Q8IWB9 1127 aa12.39□□□□□ -0.43
MMP3-201ENST00000299855 LMOD2Q6P5Q4 547 aa12.38□□□□□ -0.43
MMP3-201ENST00000299855 NUP160Q12769 1436 aa12.38□□□□□ -0.43
MMP3-201ENST00000299855 CCDC27Q2M243 656 aa12.37□□□□□ -0.43
MMP3-201ENST00000299855 ECM2O94769 699 aaPredicted RBP12.37□□□□□ -0.43
MMP3-201ENST00000299855 CEP170Q5SW79 1584 aa12.36□□□□□ -0.43
MMP3-201ENST00000299855 CCNB3Q8WWL7 1395 aa12.36□□□□□ -0.43
MMP3-201ENST00000299855 PLCD4Q9BRC7 762 aa12.36□□□□□ -0.43
MMP3-201ENST00000299855 PTMSP20962 102 aa12.35□□□□□ -0.43
MMP3-201ENST00000299855 ZNF526Q8TF50 670 aaPredicted RBP12.35□□□□□ -0.43
MMP3-201ENST00000299855 KCNH8Q96L42 1107 aa12.35□□□□□ -0.43
MMP3-201ENST00000299855 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
MMP3-201ENST00000299855 PPP1R15AO75807 674 aaPredicted RBP12.33□□□□□ -0.43
MMP3-201ENST00000299855 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.43
MMP3-201ENST00000299855 CCDC125Q86Z20 511 aa12.33□□□□□ -0.43
MMP3-201ENST00000299855 KANK4Q5T7N3 995 aaPredicted RBP12.32□□□□□ -0.44
MMP3-201ENST00000299855 MAPKBP1O60336 1514 aa12.32□□□□□ -0.44
MMP3-201ENST00000299855 SHROOM2Q13796 1616 aa12.31□□□□□ -0.44
MMP3-201ENST00000299855 GZF1Q9H116 711 aaPredicted RBP12.3□□□□□ -0.44
MMP3-201ENST00000299855 MAP3K1Q13233 1512 aa12.3□□□□□ -0.44
MMP3-201ENST00000299855 ERCC6L2Q5T890 1561 aa12.3□□□□□ -0.44
MMP3-201ENST00000299855 MSH5O43196 834 aa12.3□□□□□ -0.44
MMP3-201ENST00000299855 CCDC82Q8N4S0 544 aa12.3□□□□□ -0.44
MMP3-201ENST00000299855 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
MMP3-201ENST00000299855 DDX10Q13206 875 aaKnown RBP12.29□□□□□ -0.44
MMP3-201ENST00000299855 ANP32CO43423 234 aa12.28□□□□□ -0.44
MMP3-201ENST00000299855 IGF1RP08069 1367 aa12.28□□□□□ -0.44
MMP3-201ENST00000299855 RAB3GAP2Q9H2M9 1393 aa12.28□□□□□ -0.44
MMP3-201ENST00000299855 RBM10P98175 930 aaKnown RBP12.28□□□□□ -0.44
MMP3-201ENST00000299855 PRDM10Q9NQV6 1147 aa12.27□□□□□ -0.44
MMP3-201ENST00000299855 SETD5Q9C0A6 1442 aa12.27□□□□□ -0.45
MMP3-201ENST00000299855 PRG4Q92954 1404 aaPredicted RBP12.25□□□□□ -0.45
MMP3-201ENST00000299855 CUL7Q14999 1698 aa12.25□□□□□ -0.45
MMP3-201ENST00000299855 FOXD1Q16676 465 aa12.24□□□□□ -0.45
MMP3-201ENST00000299855 JPH4Q96JJ6 628 aa12.24□□□□□ -0.45
MMP3-201ENST00000299855 MAFGO15525 162 aa12.23□□□□□ -0.45
MMP3-201ENST00000299855 CNPY4Q8N129 248 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms