RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 ST20-MTHFSA0A0A6YYL1 179 aa23.27■■□□□ 1.32
CHRNA5-201ENST00000299565 NOP58Q9Y2X3 529 aaKnown RBP23.26■■□□□ 1.31
CHRNA5-201ENST00000299565 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
CHRNA5-201ENST00000299565 MAP3K1Q13233 1512 aa23.24■■□□□ 1.31
CHRNA5-201ENST00000299565 NUP155O75694 1391 aa23.24■■□□□ 1.31
CHRNA5-201ENST00000299565 LAS1LQ9Y4W2 734 aaKnown RBP23.23■■□□□ 1.31
CHRNA5-201ENST00000299565 ZBED9Q6R2W3 1325 aa23.23■■□□□ 1.31
CHRNA5-201ENST00000299565 CNTLNQ9NXG0 1405 aa23.23■■□□□ 1.31
CHRNA5-201ENST00000299565 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
CHRNA5-201ENST00000299565 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
CHRNA5-201ENST00000299565 DEKP35659 375 aaKnown RBP23.21■■□□□ 1.31
CHRNA5-201ENST00000299565 NUDCQ9Y266 331 aa23.2■■□□□ 1.31
CHRNA5-201ENST00000299565 AKNAQ7Z591 1439 aa23.19■■□□□ 1.3
CHRNA5-201ENST00000299565 CDK13Q14004 1512 aaKnown RBP23.19■■□□□ 1.3
CHRNA5-201ENST00000299565 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
CHRNA5-201ENST00000299565 USP47Q96K76 1375 aa23.18■■□□□ 1.3
CHRNA5-201ENST00000299565 EFCAB5A4FU69 1503 aa23.15■■□□□ 1.3
CHRNA5-201ENST00000299565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.15■■□□□ 1.3
CHRNA5-201ENST00000299565 PLIN1O60240 522 aa23.15■■□□□ 1.3
CHRNA5-201ENST00000299565 FANCIQ9NVI1 1328 aa23.13■■□□□ 1.29
CHRNA5-201ENST00000299565 PAK3O75914 559 aaPredicted RBP23.13■■□□□ 1.29
CHRNA5-201ENST00000299565 PTPN23Q9H3S7 1636 aa23.12■■□□□ 1.29
CHRNA5-201ENST00000299565 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
CHRNA5-201ENST00000299565 EXOC6Q8TAG9 804 aa23.11■■□□□ 1.29
CHRNA5-201ENST00000299565 ERICH6BQ5W0A0 696 aa23.1■■□□□ 1.29
CHRNA5-201ENST00000299565 RTN4Q9NQC3 1192 aaKnown RBP23.1■■□□□ 1.29
CHRNA5-201ENST00000299565 RCAN3Q9UKA8 241 aa23.08■■□□□ 1.28
CHRNA5-201ENST00000299565 CHGAP10645 457 aaKnown RBP23.06■■□□□ 1.28
CHRNA5-201ENST00000299565 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
CHRNA5-201ENST00000299565 JPH4Q96JJ6 628 aa23.05■■□□□ 1.28
CHRNA5-201ENST00000299565 ROCK2O75116 1388 aaKnown RBP23.05■■□□□ 1.28
CHRNA5-201ENST00000299565 WDR43Q15061 677 aaKnown RBP eCLIP23.05■■□□□ 1.28
CHRNA5-201ENST00000299565 PRG4Q92954 1404 aaPredicted RBP23.03■■□□□ 1.28
CHRNA5-201ENST00000299565 ANKRD30AQ9BXX3 1397 aa23.03■■□□□ 1.28
CHRNA5-201ENST00000299565 CANXP27824 592 aaKnown RBP23.03■■□□□ 1.28
CHRNA5-201ENST00000299565 CDCA7LQ96GN5 454 aa23.02■■□□□ 1.28
CHRNA5-201ENST00000299565 EPRSP07814 1512 aaKnown RBP23.01■■□□□ 1.27
CHRNA5-201ENST00000299565 ANKRD30BQ9BXX2 1392 aa23.01■■□□□ 1.27
CHRNA5-201ENST00000299565 RGS3P49796 1198 aa23.01■■□□□ 1.27
CHRNA5-201ENST00000299565 SKAP1Q86WV1 359 aa23.01■■□□□ 1.27
CHRNA5-201ENST00000299565 SNAPC4Q5SXM2 1469 aa23.01■■□□□ 1.27
CHRNA5-201ENST00000299565 EHBP1L1Q8N3D4 1523 aa23.01■■□□□ 1.27
CHRNA5-201ENST00000299565 PRDM2Q13029 1718 aa23■■□□□ 1.27
CHRNA5-201ENST00000299565 SUPT6HQ7KZ85 1726 aaKnown RBP23■■□□□ 1.27
CHRNA5-201ENST00000299565 NEFMP07197 916 aa22.98■■□□□ 1.27
CHRNA5-201ENST00000299565 NEUROD2Q15784 382 aa22.98■■□□□ 1.27
CHRNA5-201ENST00000299565 NBPF1Q3BBV0 1214 aa22.97■■□□□ 1.27
CHRNA5-201ENST00000299565 PNISRQ8TF01 805 aaKnown RBP22.97■■□□□ 1.27
CHRNA5-201ENST00000299565 TNNT2P45379 298 aaPredicted RBP22.96■■□□□ 1.27
CHRNA5-201ENST00000299565 IPO9Q96P70 1041 aaKnown RBP22.96■■□□□ 1.27
CHRNA5-201ENST00000299565 CFAP43Q8NDM7 1665 aa22.96■■□□□ 1.27
CHRNA5-201ENST00000299565 DAPK1P53355 1430 aa22.95■■□□□ 1.27
CHRNA5-201ENST00000299565 KNSTRNQ9Y448 316 aa22.95■■□□□ 1.26
CHRNA5-201ENST00000299565 GRIN2BQ13224 1484 aa22.94■■□□□ 1.26
CHRNA5-201ENST00000299565 NCOA1Q15788 1441 aa22.94■■□□□ 1.26
CHRNA5-201ENST00000299565 PANK3Q9H999 370 aa22.93■■□□□ 1.26
CHRNA5-201ENST00000299565 SLC4A3P48751 1232 aa22.93■■□□□ 1.26
CHRNA5-201ENST00000299565 ABCC5O15440 1437 aa22.92■■□□□ 1.26
CHRNA5-201ENST00000299565 RRP1P56182 461 aaKnown RBP22.92■■□□□ 1.26
CHRNA5-201ENST00000299565 NLRP13Q86W25 1043 aa22.92■■□□□ 1.26
CHRNA5-201ENST00000299565 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
CHRNA5-201ENST00000299565 KTN1Q86UP2 1357 aaKnown RBP22.91■■□□□ 1.26
CHRNA5-201ENST00000299565 MYBBP1AQ9BQG0 1328 aaKnown RBP22.91■■□□□ 1.26
CHRNA5-201ENST00000299565 RALBP1Q15311 655 aa22.9■■□□□ 1.26
CHRNA5-201ENST00000299565 ARXQ96QS3 562 aa22.9■■□□□ 1.26
CHRNA5-201ENST00000299565 ANKRD50Q9ULJ7 1429 aa22.89■■□□□ 1.26
CHRNA5-201ENST00000299565 KIF15Q9NS87 1388 aa22.89■■□□□ 1.25
CHRNA5-201ENST00000299565 THOC2Q8NI27 1593 aaKnown RBP22.88■■□□□ 1.25
CHRNA5-201ENST00000299565 CCDC146Q8IYE0 955 aa22.88■■□□□ 1.25
CHRNA5-201ENST00000299565 MIA2Q96PC5 1412 aa22.88■■□□□ 1.25
CHRNA5-201ENST00000299565 CUL7Q14999 1698 aa22.87■■□□□ 1.25
CHRNA5-201ENST00000299565 TMF1P82094 1093 aa22.86■■□□□ 1.25
CHRNA5-201ENST00000299565 MAGI3Q5TCQ9 1506 aa22.86■■□□□ 1.25
CHRNA5-201ENST00000299565 PDE4AP27815 886 aa22.86■■□□□ 1.25
CHRNA5-201ENST00000299565 CRBNQ96SW2 442 aa22.84■■□□□ 1.25
CHRNA5-201ENST00000299565 UGGT2Q9NYU1 1516 aa22.83■■□□□ 1.25
CHRNA5-201ENST00000299565 RPRD2Q5VT52 1461 aaKnown RBP22.83■■□□□ 1.25
CHRNA5-201ENST00000299565 KDM6BO15054 1643 aa22.82■■□□□ 1.24
CHRNA5-201ENST00000299565 CARMIL2Q6F5E8 1435 aa22.8■■□□□ 1.24
CHRNA5-201ENST00000299565 PLB1Q6P1J6 1458 aa22.8■■□□□ 1.24
CHRNA5-201ENST00000299565 ZNF608Q9ULD9 1512 aaPredicted RBP22.8■■□□□ 1.24
CHRNA5-201ENST00000299565 FRAT1Q92837 279 aaPredicted RBP22.8■■□□□ 1.24
CHRNA5-201ENST00000299565 KIAA1107Q9UPP5 1409 aa22.79■■□□□ 1.24
CHRNA5-201ENST00000299565 HECW1Q76N89 1606 aa22.78■■□□□ 1.24
CHRNA5-201ENST00000299565 IQGAP2Q13576 1575 aa22.77■■□□□ 1.24
CHRNA5-201ENST00000299565 CTTNBP2Q8WZ74 1663 aa22.77■■□□□ 1.23
CHRNA5-201ENST00000299565 TCERG1O14776 1098 aaKnown RBP22.76■■□□□ 1.23
CHRNA5-201ENST00000299565 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.75■■□□□ 1.23
CHRNA5-201ENST00000299565 CCDC144AA2RUR9 1427 aa22.75■■□□□ 1.23
CHRNA5-201ENST00000299565 SMG6Q86US8 1419 aaKnown RBP22.75■■□□□ 1.23
CHRNA5-201ENST00000299565 ADAMTS8Q9UP79 889 aa22.74■■□□□ 1.23
CHRNA5-201ENST00000299565 TROQ12816 1431 aaPredicted RBP22.71■■□□□ 1.23
CHRNA5-201ENST00000299565 ROCK1Q13464 1354 aa22.71■■□□□ 1.23
CHRNA5-201ENST00000299565 EIF5BO60841 1220 aaKnown RBP22.69■■□□□ 1.22
CHRNA5-201ENST00000299565 C20orf194Q5TEA3 1177 aa22.68■■□□□ 1.22
CHRNA5-201ENST00000299565 CAMSAP2Q08AD1 1489 aa22.66■■□□□ 1.22
CHRNA5-201ENST00000299565 DENND4BO75064 1496 aaPredicted RBP22.66■■□□□ 1.22
CHRNA5-201ENST00000299565 DHX29Q7Z478 1369 aaKnown RBP22.66■■□□□ 1.22
CHRNA5-201ENST00000299565 C9orf84Q5VXU9 1444 aa22.66■■□□□ 1.22
CHRNA5-201ENST00000299565 SAFB2Q14151 953 aaKnown RBP eCLIP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms