RNA–Protein interactions for RNA: ENST00000299300.10

CCT2-201, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT2, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-201ENST00000299300 TRIM52Q96A61 297 aa19.64■□□□□ 0.73
CCT2-201ENST00000299300 RPRD2Q5VT52 1461 aaKnown RBP19.64■□□□□ 0.73
CCT2-201ENST00000299300 ADGBQ8N7X0 1667 aa19.62■□□□□ 0.73
CCT2-201ENST00000299300 SYNJ2O15056 1496 aa19.62■□□□□ 0.73
CCT2-201ENST00000299300 TEX14Q8IWB6 1497 aa19.61■□□□□ 0.73
CCT2-201ENST00000299300 HSPA5P11021 654 aaKnown RBP19.61■□□□□ 0.73
CCT2-201ENST00000299300 CDK11AQ9UQ88 783 aaPredicted RBP19.6■□□□□ 0.73
CCT2-201ENST00000299300 WASHC2AQ641Q2 1341 aa19.59■□□□□ 0.73
CCT2-201ENST00000299300 CROCC2H7BZ55 1655 aa19.59■□□□□ 0.73
CCT2-201ENST00000299300 ADGRL2O95490 1459 aa19.58■□□□□ 0.73
CCT2-201ENST00000299300 L3MBTL2Q969R5 705 aa19.58■□□□□ 0.73
CCT2-201ENST00000299300 CAMSAP2Q08AD1 1489 aa19.58■□□□□ 0.72
CCT2-201ENST00000299300 NUP160Q12769 1436 aa19.58■□□□□ 0.72
CCT2-201ENST00000299300 ARID3CA6NKF2 412 aa19.58■□□□□ 0.72
CCT2-201ENST00000299300 POLR1AO95602 1720 aaPredicted RBP19.57■□□□□ 0.72
CCT2-201ENST00000299300 GPATCH8Q9UKJ3 1502 aaKnown RBP19.57■□□□□ 0.72
CCT2-201ENST00000299300 PRG4Q92954 1404 aaPredicted RBP19.57■□□□□ 0.72
CCT2-201ENST00000299300 ZNF644Q9H582 1327 aaPredicted RBP19.56■□□□□ 0.72
CCT2-201ENST00000299300 EIF4G2P78344 907 aaKnown RBP eCLIP19.56■□□□□ 0.72
CCT2-201ENST00000299300 MYT1Q01538 1121 aa19.56■□□□□ 0.72
CCT2-201ENST00000299300 PZPP20742 1482 aa19.56■□□□□ 0.72
CCT2-201ENST00000299300 NCOA1Q15788 1441 aa19.55■□□□□ 0.72
CCT2-201ENST00000299300 KIF14Q15058 1648 aa19.55■□□□□ 0.72
CCT2-201ENST00000299300 PLB1Q6P1J6 1458 aa19.54■□□□□ 0.72
CCT2-201ENST00000299300 CNTLNQ9NXG0 1405 aa19.54■□□□□ 0.72
CCT2-201ENST00000299300 TSHZ2Q9NRE2 1034 aa19.53■□□□□ 0.72
CCT2-201ENST00000299300 SPATA31E1Q6ZUB1 1445 aa19.51■□□□□ 0.71
CCT2-201ENST00000299300 ABCA8O94911 1581 aa19.51■□□□□ 0.71
CCT2-201ENST00000299300 CARMIL2Q6F5E8 1435 aa19.5■□□□□ 0.71
CCT2-201ENST00000299300 FKBP8Q14318 412 aa19.5■□□□□ 0.71
CCT2-201ENST00000299300 FOXD1Q16676 465 aa19.5■□□□□ 0.71
CCT2-201ENST00000299300 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
CCT2-201ENST00000299300 CCDC7Q96M83 1385 aa19.49■□□□□ 0.71
CCT2-201ENST00000299300 MBD5Q9P267 1494 aa19.49■□□□□ 0.71
CCT2-201ENST00000299300 NBPF8Q3BBV2 869 aa19.49■□□□□ 0.71
CCT2-201ENST00000299300 CDC42BPAQ5VT25 1732 aa19.48■□□□□ 0.71
CCT2-201ENST00000299300 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
CCT2-201ENST00000299300 ABCC10Q5T3U5 1492 aa19.46■□□□□ 0.71
CCT2-201ENST00000299300 CFDP1Q9UEE9 299 aaPredicted RBP19.46■□□□□ 0.71
CCT2-201ENST00000299300 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
CCT2-201ENST00000299300 KIAA1107Q9UPP5 1409 aa19.45■□□□□ 0.7
CCT2-201ENST00000299300 SHANK2Q9UPX8 1470 aa19.45■□□□□ 0.7
CCT2-201ENST00000299300 C11orf95C9JLR9 678 aaPredicted RBP19.44■□□□□ 0.7
CCT2-201ENST00000299300 JPH4Q96JJ6 628 aa19.44■□□□□ 0.7
CCT2-201ENST00000299300 NEFLP07196 543 aa19.42■□□□□ 0.7
CCT2-201ENST00000299300 ANKRD30AQ9BXX3 1397 aa19.41■□□□□ 0.7
CCT2-201ENST00000299300 KDM5DQ9BY66 1539 aa19.4■□□□□ 0.7
CCT2-201ENST00000299300 ATP10BO94823 1461 aa19.4■□□□□ 0.7
CCT2-201ENST00000299300 BCANQ96GW7 911 aa19.37■□□□□ 0.69
CCT2-201ENST00000299300 PRKRIP1Q9H875 184 aaPredicted RBP19.37■□□□□ 0.69
CCT2-201ENST00000299300 ARHGEF5Q12774 1597 aa19.37■□□□□ 0.69
CCT2-201ENST00000299300 ANKRD50Q9ULJ7 1429 aa19.36■□□□□ 0.69
CCT2-201ENST00000299300 KIF7Q2M1P5 1343 aa19.36■□□□□ 0.69
CCT2-201ENST00000299300 UHRF1BP1Q6BDS2 1440 aa19.35■□□□□ 0.69
CCT2-201ENST00000299300 HNRNPUQ00839 825 aaKnown RBP eCLIP19.35■□□□□ 0.69
CCT2-201ENST00000299300 BCORL1Q5H9F3 1711 aa19.33■□□□□ 0.69
CCT2-201ENST00000299300 C9orf84Q5VXU9 1444 aa19.33■□□□□ 0.68
CCT2-201ENST00000299300 KDM5CP41229 1560 aa19.33■□□□□ 0.68
CCT2-201ENST00000299300 PLEKHD1A6NEE1 506 aa19.32■□□□□ 0.68
CCT2-201ENST00000299300 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
CCT2-201ENST00000299300 ARHGEF12Q9NZN5 1544 aa19.32■□□□□ 0.68
CCT2-201ENST00000299300 PTPRGP23470 1445 aa19.32■□□□□ 0.68
CCT2-201ENST00000299300 PKD2Q13563 968 aa19.3■□□□□ 0.68
CCT2-201ENST00000299300 ZNF777Q9ULD5 760 aaPredicted RBP19.3■□□□□ 0.68
CCT2-201ENST00000299300 FBLN2P98095 1184 aa19.29■□□□□ 0.68
CCT2-201ENST00000299300 RALGAPBQ86X10 1494 aa19.29■□□□□ 0.68
CCT2-201ENST00000299300 ARID4BQ4LE39 1312 aaPredicted RBP19.28■□□□□ 0.68
CCT2-201ENST00000299300 DHX29Q7Z478 1369 aaKnown RBP19.27■□□□□ 0.68
CCT2-201ENST00000299300 PREX2Q70Z35 1606 aa19.27■□□□□ 0.68
CCT2-201ENST00000299300 CDC42BPBQ9Y5S2 1711 aa19.27■□□□□ 0.67
CCT2-201ENST00000299300 ERICH6BQ5W0A0 696 aa19.26■□□□□ 0.67
CCT2-201ENST00000299300 USP47Q96K76 1375 aa19.26■□□□□ 0.67
CCT2-201ENST00000299300 SAMD9LQ8IVG5 1584 aa19.25■□□□□ 0.67
CCT2-201ENST00000299300 ZBED9Q6R2W3 1325 aa19.24■□□□□ 0.67
CCT2-201ENST00000299300 NUP155O75694 1391 aa19.23■□□□□ 0.67
CCT2-201ENST00000299300 SHROOM2Q13796 1616 aa19.22■□□□□ 0.67
CCT2-201ENST00000299300 MAST1Q9Y2H9 1570 aa19.22■□□□□ 0.67
CCT2-201ENST00000299300 MRS2Q9HD23 443 aa19.21■□□□□ 0.67
CCT2-201ENST00000299300 KIF15Q9NS87 1388 aa19.21■□□□□ 0.67
CCT2-201ENST00000299300 CCDC141Q6ZP82 1450 aa19.21■□□□□ 0.67
CCT2-201ENST00000299300 TSPY4P0CV99 314 aa19.18■□□□□ 0.66
CCT2-201ENST00000299300 TSPY10P0CW01 314 aa19.18■□□□□ 0.66
CCT2-201ENST00000299300 CHD1O14646 1710 aa19.17■□□□□ 0.66
CCT2-201ENST00000299300 ROCK2O75116 1388 aaKnown RBP19.17■□□□□ 0.66
CCT2-201ENST00000299300 RSPH4AQ5TD94 716 aa19.17■□□□□ 0.66
CCT2-201ENST00000299300 UNC13BO14795 1591 aa19.17■□□□□ 0.66
CCT2-201ENST00000299300 FAM135AQ9P2D6 1515 aa19.16■□□□□ 0.66
CCT2-201ENST00000299300 HNRNPMP52272 730 aaKnown RBP eCLIP19.15■□□□□ 0.66
CCT2-201ENST00000299300 FAM9BQ8IZU0 186 aa19.15■□□□□ 0.66
CCT2-201ENST00000299300 RBM19Q9Y4C8 960 aaKnown RBP19.15■□□□□ 0.66
CCT2-201ENST00000299300 E9PCH4 1651 aa19.15■□□□□ 0.66
CCT2-201ENST00000299300 PLXNC1O60486 1568 aa19.12■□□□□ 0.65
CCT2-201ENST00000299300 TTC37Q6PGP7 1564 aa19.12■□□□□ 0.65
CCT2-201ENST00000299300 TRPM1Q7Z4N2 1603 aa19.11■□□□□ 0.65
CCT2-201ENST00000299300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.1■□□□□ 0.658e-15■■■□□ 15.6
CCT2-201ENST00000299300 PPP4R2Q9NY27 417 aa19.1■□□□□ 0.65
CCT2-201ENST00000299300 SYCP2Q9BX26 1530 aa19.09■□□□□ 0.65
CCT2-201ENST00000299300 SMG6Q86US8 1419 aaKnown RBP19.09■□□□□ 0.65
CCT2-201ENST00000299300 MYO5CQ9NQX4 1742 aa19.09■□□□□ 0.65
CCT2-201ENST00000299300 ZNF326Q5BKZ1 582 aaKnown RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms