RNA–Protein interactions for RNA: ENST00000291892.10

RDH13-201, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 3,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-201ENST00000291892 L3MBTL2Q969R5 705 aa17.98■□□□□ 0.47
RDH13-201ENST00000291892 ARID4BQ4LE39 1312 aaPredicted RBP17.98■□□□□ 0.47
RDH13-201ENST00000291892 AQRO60306 1485 aaKnown RBP eCLIP17.97■□□□□ 0.471e-9■■■■■ 45.4
RDH13-201ENST00000291892 PLEKHG5O94827 1062 aa17.97■□□□□ 0.47
RDH13-201ENST00000291892 KIF7Q2M1P5 1343 aa17.97■□□□□ 0.47
RDH13-201ENST00000291892 TMC1Q8TDI8 760 aa17.97■□□□□ 0.47
RDH13-201ENST00000291892 RRAGDQ9NQL2 400 aaPredicted RBP17.96■□□□□ 0.47
RDH13-201ENST00000291892 ZNF326Q5BKZ1 582 aaKnown RBP17.95■□□□□ 0.46
RDH13-201ENST00000291892 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
RDH13-201ENST00000291892 RCAN3Q9UKA8 241 aa17.93■□□□□ 0.46
RDH13-201ENST00000291892 UACAQ9BZF9 1416 aa17.92■□□□□ 0.46
RDH13-201ENST00000291892 POGKQ9P215 609 aa17.91■□□□□ 0.46
RDH13-201ENST00000291892 BIVM-ERCC5R4GMW8 1640 aa17.91■□□□□ 0.46
RDH13-201ENST00000291892 MS4A1P11836 297 aa17.9■□□□□ 0.46
RDH13-201ENST00000291892 NBPF8Q3BBV2 869 aa17.89■□□□□ 0.45
RDH13-201ENST00000291892 KDM5BQ9UGL1 1544 aa17.89■□□□□ 0.45
RDH13-201ENST00000291892 PTPRKQ15262 1439 aa17.89■□□□□ 0.45
RDH13-201ENST00000291892 HSP90AA2PQ14568 343 aaPredicted RBP17.89■□□□□ 0.45
RDH13-201ENST00000291892 NCOA1Q15788 1441 aa17.89■□□□□ 0.45
RDH13-201ENST00000291892 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
RDH13-201ENST00000291892 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
RDH13-201ENST00000291892 PODXL2Q9NZ53 605 aa17.86■□□□□ 0.45
RDH13-201ENST00000291892 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
RDH13-201ENST00000291892 IGF1RP08069 1367 aa17.86■□□□□ 0.45
RDH13-201ENST00000291892 RGS3P49796 1198 aa17.85■□□□□ 0.45
RDH13-201ENST00000291892 CRBNQ96SW2 442 aa17.85■□□□□ 0.45
RDH13-201ENST00000291892 CDCA7LQ96GN5 454 aa17.85■□□□□ 0.45
RDH13-201ENST00000291892 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
RDH13-201ENST00000291892 PNISRQ8TF01 805 aaKnown RBP17.84■□□□□ 0.45
RDH13-201ENST00000291892 SLKQ9H2G2 1235 aaPredicted RBP17.83■□□□□ 0.45
RDH13-201ENST00000291892 HSP90AA1P07900 732 aaKnown RBP17.82■□□□□ 0.44
RDH13-201ENST00000291892 PNNQ9H307 717 aaKnown RBP17.81■□□□□ 0.44
RDH13-201ENST00000291892 FHOD3Q2V2M9 1422 aa17.81■□□□□ 0.44
RDH13-201ENST00000291892 FGD6Q6ZV73 1430 aa17.8■□□□□ 0.44
RDH13-201ENST00000291892 NAIPQ13075 1403 aa17.79■□□□□ 0.44
RDH13-201ENST00000291892 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
RDH13-201ENST00000291892 GZF1Q9H116 711 aaPredicted RBP17.79■□□□□ 0.44
RDH13-201ENST00000291892 MAP3K1Q13233 1512 aa17.78■□□□□ 0.44
RDH13-201ENST00000291892 FMN1Q68DA7 1419 aa17.77■□□□□ 0.44
RDH13-201ENST00000291892 PCF11O94913 1555 aaKnown RBP17.77■□□□□ 0.44
RDH13-201ENST00000291892 MTUS2Q5JR59 1369 aa17.77■□□□□ 0.43
RDH13-201ENST00000291892 C20orf194Q5TEA3 1177 aa17.77■□□□□ 0.43
RDH13-201ENST00000291892 PTPN23Q9H3S7 1636 aa17.77■□□□□ 0.43
RDH13-201ENST00000291892 TDRD9Q8NDG6 1382 aaKnown RBP17.76■□□□□ 0.43
RDH13-201ENST00000291892 MPHOSPH9Q99550 1183 aa17.76■□□□□ 0.43
RDH13-201ENST00000291892 DHX29Q7Z478 1369 aaKnown RBP17.74■□□□□ 0.43
RDH13-201ENST00000291892 A0A0U1RQG5 324 aaPredicted RBP17.73■□□□□ 0.43
RDH13-201ENST00000291892 PANK2Q9BZ23 570 aa17.73■□□□□ 0.43
RDH13-201ENST00000291892 FAM161AQ3B820 660 aa17.72■□□□□ 0.43
RDH13-201ENST00000291892 SPRYD3Q8NCJ5 442 aa17.72■□□□□ 0.43
RDH13-201ENST00000291892 C8orf34Q49A92 452 aa17.7■□□□□ 0.42
RDH13-201ENST00000291892 POLA1P09884 1462 aaPredicted RBP17.68■□□□□ 0.42
RDH13-201ENST00000291892 ARID3CA6NKF2 412 aa17.68■□□□□ 0.42
RDH13-201ENST00000291892 RRP9O43818 475 aaKnown RBP17.67■□□□□ 0.42
RDH13-201ENST00000291892 L1TD1Q5T7N2 865 aaKnown RBP17.66■□□□□ 0.42
RDH13-201ENST00000291892 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
RDH13-201ENST00000291892 XRCC6P12956 609 aaKnown RBP eCLIP17.65■□□□□ 0.42
RDH13-201ENST00000291892 DENND4BO75064 1496 aaPredicted RBP17.64■□□□□ 0.41
RDH13-201ENST00000291892 CFAP43Q8NDM7 1665 aa17.63■□□□□ 0.41
RDH13-201ENST00000291892 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
RDH13-201ENST00000291892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.62■□□□□ 0.41
RDH13-201ENST00000291892 KTN1Q86UP2 1357 aaKnown RBP17.62■□□□□ 0.41
RDH13-201ENST00000291892 GOLGA6L3A6NEY3 463 aa17.62■□□□□ 0.41
RDH13-201ENST00000291892 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
RDH13-201ENST00000291892 USP47Q96K76 1375 aa17.61■□□□□ 0.41
RDH13-201ENST00000291892 ARID3AQ99856 593 aa17.61■□□□□ 0.41
RDH13-201ENST00000291892 SPATA31E1Q6ZUB1 1445 aa17.59■□□□□ 0.41
RDH13-201ENST00000291892 CLCN1P35523 988 aa17.58■□□□□ 0.4
RDH13-201ENST00000291892 MYBBP1AQ9BQG0 1328 aaKnown RBP17.58■□□□□ 0.4
RDH13-201ENST00000291892 SEC24BO95487 1268 aa17.58■□□□□ 0.4
RDH13-201ENST00000291892 CENPQQ7L2Z9 268 aaPredicted RBP17.58■□□□□ 0.4
RDH13-201ENST00000291892 PRDM2Q13029 1718 aa17.57■□□□□ 0.4
RDH13-201ENST00000291892 KDM6BO15054 1643 aa17.57■□□□□ 0.4
RDH13-201ENST00000291892 CC2D1BQ5T0F9 858 aaKnown RBP17.56■□□□□ 0.4
RDH13-201ENST00000291892 KDM2BQ8NHM5 1336 aa17.55■□□□□ 0.4
RDH13-201ENST00000291892 KDM2AQ9Y2K7 1162 aa17.55■□□□□ 0.4
RDH13-201ENST00000291892 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
RDH13-201ENST00000291892 DNMBPQ6XZF7 1577 aa17.54■□□□□ 0.4
RDH13-201ENST00000291892 MYOM3Q5VTT5 1437 aa17.53■□□□□ 0.4
RDH13-201ENST00000291892 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
RDH13-201ENST00000291892 PDE3BQ13370 1112 aa17.53■□□□□ 0.4
RDH13-201ENST00000291892 BECN1Q14457 450 aa17.53■□□□□ 0.4
RDH13-201ENST00000291892 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
RDH13-201ENST00000291892 FYCO1Q9BQS8 1478 aa17.52■□□□□ 0.39
RDH13-201ENST00000291892 CARD11Q9BXL7 1154 aa17.52■□□□□ 0.39
RDH13-201ENST00000291892 BRD4O60885 1362 aaPredicted RBP17.51■□□□□ 0.39
RDH13-201ENST00000291892 RBM10P98175 930 aaKnown RBP17.51■□□□□ 0.39
RDH13-201ENST00000291892 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
RDH13-201ENST00000291892 ST20-MTHFSA0A0A6YYL1 179 aa17.5■□□□□ 0.39
RDH13-201ENST00000291892 BCORL1Q5H9F3 1711 aa17.5■□□□□ 0.39
RDH13-201ENST00000291892 PDS5BQ9NTI5 1447 aa17.49■□□□□ 0.39
RDH13-201ENST00000291892 ANKRD30BQ9BXX2 1392 aa17.49■□□□□ 0.39
RDH13-201ENST00000291892 ESPNB1AK53 854 aa17.48■□□□□ 0.39
RDH13-201ENST00000291892 NLRP13Q86W25 1043 aa17.48■□□□□ 0.39
RDH13-201ENST00000291892 MYH16Q9H6N6 1097 aa17.48■□□□□ 0.39
RDH13-201ENST00000291892 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
RDH13-201ENST00000291892 TRIM44Q96DX7 344 aaPredicted RBP17.47■□□□□ 0.39
RDH13-201ENST00000291892 RALBP1Q15311 655 aa17.47■□□□□ 0.39
RDH13-201ENST00000291892 TEX14Q8IWB6 1497 aa17.47■□□□□ 0.39
RDH13-201ENST00000291892 USP19O94966 1318 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms