RNA–Protein interactions for RNA: ENST00000278886.10

NINL-201, Transcript of ninein like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NINL, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINL-201ENST00000278886 IGF1RP08069 1367 aa22.93■■□□□ 1.26
NINL-201ENST00000278886 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
NINL-201ENST00000278886 MORC1Q86VD1 984 aa22.91■■□□□ 1.26
NINL-201ENST00000278886 FRAT1Q92837 279 aaPredicted RBP22.91■■□□□ 1.26
NINL-201ENST00000278886 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
NINL-201ENST00000278886 DDRGK1Q96HY6 314 aa22.9■■□□□ 1.26
NINL-201ENST00000278886 PNNQ9H307 717 aaKnown RBP22.89■■□□□ 1.26
NINL-201ENST00000278886 BECN1Q14457 450 aa22.89■■□□□ 1.25
NINL-201ENST00000278886 KTN1Q86UP2 1357 aaKnown RBP22.88■■□□□ 1.25
NINL-201ENST00000278886 STK26Q9P289 416 aa22.88■■□□□ 1.25
NINL-201ENST00000278886 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
NINL-201ENST00000278886 RAD54L2Q9Y4B4 1467 aa22.83■■□□□ 1.25
NINL-201ENST00000278886 DHX57Q6P158 1386 aaKnown RBP22.83■■□□□ 1.25
NINL-201ENST00000278886 PTPRGP23470 1445 aa22.83■■□□□ 1.25
NINL-201ENST00000278886 MS4A1P11836 297 aa22.82■■□□□ 1.24
NINL-201ENST00000278886 RGS3P49796 1198 aa22.8■■□□□ 1.24
NINL-201ENST00000278886 B4GALNT3Q6L9W6 998 aa22.8■■□□□ 1.24
NINL-201ENST00000278886 RALBP1Q15311 655 aa22.79■■□□□ 1.24
NINL-201ENST00000278886 CHMP4BQ9H444 224 aaKnown RBP22.79■■□□□ 1.24
NINL-201ENST00000278886 HDGFL2Q7Z4V5 671 aaPredicted RBP22.79■■□□□ 1.24
NINL-201ENST00000278886 ARXQ96QS3 562 aa22.78■■□□□ 1.24
NINL-201ENST00000278886 SOX12O15370 315 aa22.78■■□□□ 1.24
NINL-201ENST00000278886 WASHC2CQ9Y4E1 1318 aa22.74■■□□□ 1.23
NINL-201ENST00000278886 EIF3AQ14152 1382 aaKnown RBP22.74■■□□□ 1.23
NINL-201ENST00000278886 CASC1Q6TDU7 716 aa22.72■■□□□ 1.23
NINL-201ENST00000278886 EIF5BO60841 1220 aaKnown RBP22.7■■□□□ 1.23
NINL-201ENST00000278886 CCDC144AA2RUR9 1427 aa22.67■■□□□ 1.22
NINL-201ENST00000278886 U2AF1L5P0DN76 240 aaPredicted RBP22.67■■□□□ 1.22
NINL-201ENST00000278886 U2AF1Q01081 240 aaKnown RBP eCLIP22.67■■□□□ 1.22
NINL-201ENST00000278886 GOLGA6L22H0YM25 854 aa22.65■■□□□ 1.22
NINL-201ENST00000278886 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.219e-7■■■□□ 16.1
NINL-201ENST00000278886 KIF21BO75037 1637 aa22.63■■□□□ 1.21
NINL-201ENST00000278886 CFTRP13569 1480 aa22.63■■□□□ 1.21
NINL-201ENST00000278886 NLRP13Q86W25 1043 aa22.62■■□□□ 1.21
NINL-201ENST00000278886 NUTM2DQ5VT03 806 aaPredicted RBP22.62■■□□□ 1.21
NINL-201ENST00000278886 ST20-MTHFSA0A0A6YYL1 179 aa22.61■■□□□ 1.21
NINL-201ENST00000278886 NCLP19338 710 aaKnown RBP22.61■■□□□ 1.21
NINL-201ENST00000278886 RCAN3Q9UKA8 241 aa22.61■■□□□ 1.21
NINL-201ENST00000278886 ANP32EQ9BTT0 268 aa22.6■■□□□ 1.21
NINL-201ENST00000278886 MYOM3Q5VTT5 1437 aa22.6■■□□□ 1.21
NINL-201ENST00000278886 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
NINL-201ENST00000278886 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
NINL-201ENST00000278886 TERF2IPQ9NYB0 399 aa22.6■■□□□ 1.21
NINL-201ENST00000278886 OSCARQ8IYS5 282 aa22.58■■□□□ 1.2
NINL-201ENST00000278886 OS9Q13438 667 aaPredicted RBP22.58■■□□□ 1.2
NINL-201ENST00000278886 ERICH6BQ5W0A0 696 aa22.58■■□□□ 1.2
NINL-201ENST00000278886 TRAK1Q9UPV9 953 aa22.56■■□□□ 1.2
NINL-201ENST00000278886 PHLDB1Q86UU1 1377 aa22.55■■□□□ 1.2
NINL-201ENST00000278886 PAK3O75914 559 aaPredicted RBP22.55■■□□□ 1.2
NINL-201ENST00000278886 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
NINL-201ENST00000278886 CALD1Q05682 793 aaKnown RBP22.54■■□□□ 1.2
NINL-201ENST00000278886 LRRC9Q6ZRR7 1453 aa22.54■■□□□ 1.2
NINL-201ENST00000278886 IPO8O15397 1037 aaKnown RBP22.54■■□□□ 1.2
NINL-201ENST00000278886 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
NINL-201ENST00000278886 ZNF644Q9H582 1327 aaPredicted RBP22.53■■□□□ 1.2
NINL-201ENST00000278886 CYB5RLQ6IPT4 315 aa22.53■■□□□ 1.2
NINL-201ENST00000278886 CUX1P39880 1505 aa22.52■■□□□ 1.2
NINL-201ENST00000278886 CASKIN1Q8WXD9 1431 aa22.52■■□□□ 1.2
NINL-201ENST00000278886 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.2
NINL-201ENST00000278886 UACAQ9BZF9 1416 aa22.52■■□□□ 1.19
NINL-201ENST00000278886 KIF15Q9NS87 1388 aa22.51■■□□□ 1.19
NINL-201ENST00000278886 GRIN2BQ13224 1484 aa22.51■■□□□ 1.19
NINL-201ENST00000278886 NOP58Q9Y2X3 529 aaKnown RBP22.49■■□□□ 1.19
NINL-201ENST00000278886 GOLGA2Q08379 1002 aa22.48■■□□□ 1.19
NINL-201ENST00000278886 USP47Q96K76 1375 aa22.48■■□□□ 1.19
NINL-201ENST00000278886 PANK3Q9H999 370 aa22.48■■□□□ 1.19
NINL-201ENST00000278886 VGFO15240 615 aaPredicted RBP22.47■■□□□ 1.19
NINL-201ENST00000278886 NESP48681 1621 aa22.46■■□□□ 1.19
NINL-201ENST00000278886 MYBBP1AQ9BQG0 1328 aaKnown RBP22.46■■□□□ 1.19
NINL-201ENST00000278886 ARAP1Q96P48 1450 aa22.46■■□□□ 1.19
NINL-201ENST00000278886 PDE3BQ13370 1112 aa22.46■■□□□ 1.19
NINL-201ENST00000278886 PRKRIP1Q9H875 184 aaPredicted RBP22.45■■□□□ 1.18
NINL-201ENST00000278886 CCDC146Q8IYE0 955 aa22.44■■□□□ 1.18
NINL-201ENST00000278886 HMGXB3Q12766 1538 aa22.44■■□□□ 1.18
NINL-201ENST00000278886 NCOA2Q15596 1464 aa22.44■■□□□ 1.18
NINL-201ENST00000278886 FYCO1Q9BQS8 1478 aa22.43■■□□□ 1.18
NINL-201ENST00000278886 HSP90AB1P08238 724 aaKnown RBP22.43■■□□□ 1.18
NINL-201ENST00000278886 NGDNQ8NEJ9 315 aaKnown RBP22.42■■□□□ 1.18
NINL-201ENST00000278886 KCNJ4P48050 445 aa22.41■■□□□ 1.18
NINL-201ENST00000278886 TRIM44Q96DX7 344 aaPredicted RBP22.41■■□□□ 1.18
NINL-201ENST00000278886 NPHP1O15259 732 aa22.4■■□□□ 1.18
NINL-201ENST00000278886 ITPRIPQ8IWB1 547 aa22.4■■□□□ 1.18
NINL-201ENST00000278886 PRXQ9BXM0 1461 aa22.4■■□□□ 1.18
NINL-201ENST00000278886 CSB-PGBD3P0DP91 1061 aa22.39■■□□□ 1.18
NINL-201ENST00000278886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.39■■□□□ 1.182e-6■■■■□ 19.8
NINL-201ENST00000278886 RWDD1Q9H446 243 aaPredicted RBP22.39■■□□□ 1.17
NINL-201ENST00000278886 PRDM2Q13029 1718 aa22.38■■□□□ 1.17
NINL-201ENST00000278886 RBM19Q9Y4C8 960 aaKnown RBP22.38■■□□□ 1.17
NINL-201ENST00000278886 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
NINL-201ENST00000278886 ANKRD50Q9ULJ7 1429 aa22.38■■□□□ 1.17
NINL-201ENST00000278886 NUTM2FA1L443 756 aa22.37■■□□□ 1.17
NINL-201ENST00000278886 SMC4Q9NTJ3 1288 aa22.37■■□□□ 1.17
NINL-201ENST00000278886 TOPBP1Q92547 1522 aa22.37■■□□□ 1.17
NINL-201ENST00000278886 FGD1P98174 961 aa22.37■■□□□ 1.17
NINL-201ENST00000278886 CC2D2AQ9P2K1 1620 aa22.36■■□□□ 1.17
NINL-201ENST00000278886 MRC2Q9UBG0 1479 aa22.36■■□□□ 1.17
NINL-201ENST00000278886 HSCBQ8IWL3 235 aa22.36■■□□□ 1.17
NINL-201ENST00000278886 EVC2Q86UK5 1308 aa22.36■■□□□ 1.17
NINL-201ENST00000278886 CFAP44Q96MT7 982 aa22.35■■□□□ 1.17
NINL-201ENST00000278886 APBB1O00213 710 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms