RNA–Protein interactions for RNA: ENST00000273347.9

NXPE3-201, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-201ENST00000273347 CAMSAP2Q08AD1 1489 aa19.51■□□□□ 0.71
NXPE3-201ENST00000273347 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
NXPE3-201ENST00000273347 TEX14Q8IWB6 1497 aa19.51■□□□□ 0.71
NXPE3-201ENST00000273347 ABCC10Q5T3U5 1492 aa19.5■□□□□ 0.71
NXPE3-201ENST00000273347 ADGRL2O95490 1459 aa19.5■□□□□ 0.71
NXPE3-201ENST00000273347 PZPP20742 1482 aa19.48■□□□□ 0.71
NXPE3-201ENST00000273347 ZNF644Q9H582 1327 aaPredicted RBP19.47■□□□□ 0.71
NXPE3-201ENST00000273347 RRP7BPQ9NSQ0 103 aa19.47■□□□□ 0.71
NXPE3-201ENST00000273347 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
NXPE3-201ENST00000273347 CHD1O14646 1710 aa19.46■□□□□ 0.71
NXPE3-201ENST00000273347 ANKRD30BQ9BXX2 1392 aa19.44■□□□□ 0.7
NXPE3-201ENST00000273347 RPRD2Q5VT52 1461 aaKnown RBP19.44■□□□□ 0.7
NXPE3-201ENST00000273347 TONSLQ96HA7 1378 aa19.43■□□□□ 0.7
NXPE3-201ENST00000273347 CHIC2Q9UKJ5 165 aa19.43■□□□□ 0.7
NXPE3-201ENST00000273347 MBD5Q9P267 1494 aa19.43■□□□□ 0.7
NXPE3-201ENST00000273347 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
NXPE3-201ENST00000273347 CDC42BPBQ9Y5S2 1711 aa19.41■□□□□ 0.7
NXPE3-201ENST00000273347 ARID3CA6NKF2 412 aa19.41■□□□□ 0.7
NXPE3-201ENST00000273347 ATP10BO94823 1461 aa19.41■□□□□ 0.7
NXPE3-201ENST00000273347 NCOA1Q15788 1441 aa19.4■□□□□ 0.7
NXPE3-201ENST00000273347 DDX10Q13206 875 aaKnown RBP19.4■□□□□ 0.7
NXPE3-201ENST00000273347 MPHOSPH9Q99550 1183 aa19.38■□□□□ 0.69
NXPE3-201ENST00000273347 SPATA31E1Q6ZUB1 1445 aa19.35■□□□□ 0.69
NXPE3-201ENST00000273347 PELP1Q8IZL8 1130 aaKnown RBP19.35■□□□□ 0.69
NXPE3-201ENST00000273347 KDM5DQ9BY66 1539 aa19.35■□□□□ 0.69
NXPE3-201ENST00000273347 SHANK2Q9UPX8 1470 aa19.35■□□□□ 0.69
NXPE3-201ENST00000273347 PREX2Q70Z35 1606 aa19.35■□□□□ 0.69
NXPE3-201ENST00000273347 ARHGEF5Q12774 1597 aa19.33■□□□□ 0.69
NXPE3-201ENST00000273347 SAMD9LQ8IVG5 1584 aa19.33■□□□□ 0.68
NXPE3-201ENST00000273347 JPH4Q96JJ6 628 aa19.32■□□□□ 0.68
NXPE3-201ENST00000273347 CARMIL2Q6F5E8 1435 aa19.31■□□□□ 0.68
NXPE3-201ENST00000273347 FOXD1Q16676 465 aa19.31■□□□□ 0.68
NXPE3-201ENST00000273347 CHMP7Q8WUX9 453 aaPredicted RBP19.3■□□□□ 0.68
NXPE3-201ENST00000273347 WASHC2AQ641Q2 1341 aa19.3■□□□□ 0.68
NXPE3-201ENST00000273347 SUPT16HQ9Y5B9 1047 aaKnown RBP19.29■□□□□ 0.68
NXPE3-201ENST00000273347 BCORL1Q5H9F3 1711 aa19.29■□□□□ 0.68
NXPE3-201ENST00000273347 ERCC6L2Q5T890 1561 aa19.29■□□□□ 0.68
NXPE3-201ENST00000273347 CCER2I3L3R5 266 aa19.27■□□□□ 0.68
NXPE3-201ENST00000273347 TTC37Q6PGP7 1564 aa19.26■□□□□ 0.67
NXPE3-201ENST00000273347 NBPF8Q3BBV2 869 aa19.26■□□□□ 0.67
NXPE3-201ENST00000273347 L3MBTL2Q969R5 705 aa19.26■□□□□ 0.67
NXPE3-201ENST00000273347 PTPRGP23470 1445 aa19.25■□□□□ 0.67
NXPE3-201ENST00000273347 C11orf95C9JLR9 678 aaPredicted RBP19.24■□□□□ 0.67
NXPE3-201ENST00000273347 KDM5CP41229 1560 aa19.24■□□□□ 0.67
NXPE3-201ENST00000273347 HSPA5P11021 654 aaKnown RBP19.23■□□□□ 0.67
NXPE3-201ENST00000273347 MAST1Q9Y2H9 1570 aa19.22■□□□□ 0.67
NXPE3-201ENST00000273347 KIAA1107Q9UPP5 1409 aa19.21■□□□□ 0.67
NXPE3-201ENST00000273347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.19■□□□□ 0.66
NXPE3-201ENST00000273347 CDK11AQ9UQ88 783 aaPredicted RBP19.19■□□□□ 0.66
NXPE3-201ENST00000273347 C9orf84Q5VXU9 1444 aa19.19■□□□□ 0.66
NXPE3-201ENST00000273347 CLASP1Q7Z460 1538 aa19.19■□□□□ 0.66
NXPE3-201ENST00000273347 UNC13BO14795 1591 aa19.18■□□□□ 0.66
NXPE3-201ENST00000273347 TRIM52Q96A61 297 aa19.18■□□□□ 0.66
NXPE3-201ENST00000273347 CNTLNQ9NXG0 1405 aa19.18■□□□□ 0.66
NXPE3-201ENST00000273347 CFDP1Q9UEE9 299 aaPredicted RBP19.18■□□□□ 0.66
NXPE3-201ENST00000273347 ANKRD50Q9ULJ7 1429 aa19.16■□□□□ 0.66
NXPE3-201ENST00000273347 UHRF1BP1Q6BDS2 1440 aa19.15■□□□□ 0.66
NXPE3-201ENST00000273347 MYO5CQ9NQX4 1742 aa19.15■□□□□ 0.66
NXPE3-201ENST00000273347 CCDC7Q96M83 1385 aa19.14■□□□□ 0.65
NXPE3-201ENST00000273347 PLXNC1O60486 1568 aa19.14■□□□□ 0.65
NXPE3-201ENST00000273347 E9PCH4 1651 aa19.14■□□□□ 0.65
NXPE3-201ENST00000273347 ABCC2Q92887 1545 aa19.13■□□□□ 0.65
NXPE3-201ENST00000273347 FBLN2P98095 1184 aa19.13■□□□□ 0.65
NXPE3-201ENST00000273347 ARHGEF12Q9NZN5 1544 aa19.12■□□□□ 0.65
NXPE3-201ENST00000273347 ANKRD30AQ9BXX3 1397 aa19.12■□□□□ 0.65
NXPE3-201ENST00000273347 ZCCHC11Q5TAX3 1644 aaKnown RBP19.11■□□□□ 0.65
NXPE3-201ENST00000273347 SYCP2Q9BX26 1530 aa19.11■□□□□ 0.65
NXPE3-201ENST00000273347 CCDC141Q6ZP82 1450 aa19.09■□□□□ 0.65
NXPE3-201ENST00000273347 IQGAP3Q86VI3 1631 aa19.09■□□□□ 0.65
NXPE3-201ENST00000273347 SLC4A1APQ9BWU0 796 aaKnown RBP19.08■□□□□ 0.65
NXPE3-201ENST00000273347 MAGI2Q86UL8 1455 aa19.08■□□□□ 0.65
NXPE3-201ENST00000273347 ANP32CO43423 234 aa19.08■□□□□ 0.65
NXPE3-201ENST00000273347 RALGAPBQ86X10 1494 aa19.08■□□□□ 0.64
NXPE3-201ENST00000273347 FAM135AQ9P2D6 1515 aa19.08■□□□□ 0.64
NXPE3-201ENST00000273347 TRPM1Q7Z4N2 1603 aa19.07■□□□□ 0.64
NXPE3-201ENST00000273347 EIF4G2P78344 907 aaKnown RBP eCLIP19.06■□□□□ 0.64
NXPE3-201ENST00000273347 CCDC184Q52MB2 194 aa19.06■□□□□ 0.64
NXPE3-201ENST00000273347 DHX29Q7Z478 1369 aaKnown RBP19.05■□□□□ 0.64
NXPE3-201ENST00000273347 KIF7Q2M1P5 1343 aa19.04■□□□□ 0.64
NXPE3-201ENST00000273347 PLA2R1Q13018 1463 aa19.04■□□□□ 0.64
NXPE3-201ENST00000273347 PLEKHD1A6NEE1 506 aa19.03■□□□□ 0.64
NXPE3-201ENST00000273347 KIF15Q9NS87 1388 aa19.02■□□□□ 0.64
NXPE3-201ENST00000273347 UHRF1BP1LA0JNW5 1464 aa19.01■□□□□ 0.63
NXPE3-201ENST00000273347 PKD2Q13563 968 aa19■□□□□ 0.63
NXPE3-201ENST00000273347 ZNF777Q9ULD5 760 aaPredicted RBP19■□□□□ 0.63
NXPE3-201ENST00000273347 LAMC1P11047 1609 aa18.99■□□□□ 0.63
NXPE3-201ENST00000273347 ABCC1P33527 1531 aa18.99■□□□□ 0.63
NXPE3-201ENST00000273347 HNRNPMP52272 730 aaKnown RBP eCLIP18.98■□□□□ 0.63
NXPE3-201ENST00000273347 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
NXPE3-201ENST00000273347 ARHGAP5Q13017 1502 aa18.96■□□□□ 0.63
NXPE3-201ENST00000273347 NUP155O75694 1391 aa18.96■□□□□ 0.63
NXPE3-201ENST00000273347 DEPDC5O75140 1603 aa18.95■□□□□ 0.62
NXPE3-201ENST00000273347 RNF17Q9BXT8 1623 aaKnown RBP18.95■□□□□ 0.62
NXPE3-201ENST00000273347 USP47Q96K76 1375 aa18.94■□□□□ 0.62
NXPE3-201ENST00000273347 ATP10AO60312 1499 aa18.93■□□□□ 0.62
NXPE3-201ENST00000273347 ABCA9Q8IUA7 1624 aa18.91■□□□□ 0.62
NXPE3-201ENST00000273347 TSHZ2Q9NRE2 1034 aa18.91■□□□□ 0.62
NXPE3-201ENST00000273347 ARAP3Q8WWN8 1544 aa18.9■□□□□ 0.62
NXPE3-201ENST00000273347 DUOX2Q9NRD8 1548 aa18.9■□□□□ 0.62
NXPE3-201ENST00000273347 A2MP01023 1474 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms