RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 ANP32EQ9BTT0 268 aa19.36■□□□□ 0.69
CNOT9-201ENST00000273064 ARXQ96QS3 562 aa19.35■□□□□ 0.69
CNOT9-201ENST00000273064 CC2D2AQ9P2K1 1620 aa19.34■□□□□ 0.69
CNOT9-201ENST00000273064 CARMIL2Q6F5E8 1435 aa19.34■□□□□ 0.69
CNOT9-201ENST00000273064 RGS3P49796 1198 aa19.34■□□□□ 0.69
CNOT9-201ENST00000273064 NCOA2Q15596 1464 aa19.34■□□□□ 0.69
CNOT9-201ENST00000273064 ANKRD30AQ9BXX3 1397 aa19.33■□□□□ 0.69
CNOT9-201ENST00000273064 NBPF8Q3BBV2 869 aa19.33■□□□□ 0.69
CNOT9-201ENST00000273064 ROCK2O75116 1388 aaKnown RBP19.33■□□□□ 0.68
CNOT9-201ENST00000273064 NEFMP07197 916 aa19.33■□□□□ 0.68
CNOT9-201ENST00000273064 MYOM3Q5VTT5 1437 aa19.32■□□□□ 0.68
CNOT9-201ENST00000273064 TOPBP1Q92547 1522 aa19.32■□□□□ 0.68
CNOT9-201ENST00000273064 MLECQ14165 292 aa19.32■□□□□ 0.68
CNOT9-201ENST00000273064 KIF3BO15066 747 aa19.31■□□□□ 0.68
CNOT9-201ENST00000273064 FRAT1Q92837 279 aaPredicted RBP19.3■□□□□ 0.68
CNOT9-201ENST00000273064 STK26Q9P289 416 aa19.29■□□□□ 0.68
CNOT9-201ENST00000273064 CASKIN1Q8WXD9 1431 aa19.29■□□□□ 0.68
CNOT9-201ENST00000273064 TMF1P82094 1093 aa19.29■□□□□ 0.68
CNOT9-201ENST00000273064 WDR97A6NE52 1622 aa19.28■□□□□ 0.68
CNOT9-201ENST00000273064 LAS1LQ9Y4W2 734 aaKnown RBP19.27■□□□□ 0.68
CNOT9-201ENST00000273064 KIF7Q2M1P5 1343 aa19.26■□□□□ 0.67
CNOT9-201ENST00000273064 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
CNOT9-201ENST00000273064 PLIN1O60240 522 aa19.25■□□□□ 0.67
CNOT9-201ENST00000273064 C11orf95C9JLR9 678 aaPredicted RBP19.24■□□□□ 0.67
CNOT9-201ENST00000273064 EFCAB2Q5VUJ9 269 aa19.24■□□□□ 0.67
CNOT9-201ENST00000273064 CCDC146Q8IYE0 955 aa19.24■□□□□ 0.67
CNOT9-201ENST00000273064 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
CNOT9-201ENST00000273064 USP47Q96K76 1375 aa19.22■□□□□ 0.67
CNOT9-201ENST00000273064 TIAM1Q13009 1591 aa19.21■□□□□ 0.67
CNOT9-201ENST00000273064 U2SURPO15042 1029 aaKnown RBP19.21■□□□□ 0.67
CNOT9-201ENST00000273064 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.21■□□□□ 0.67
CNOT9-201ENST00000273064 PANK3Q9H999 370 aa19.2■□□□□ 0.66
CNOT9-201ENST00000273064 PTPRGP23470 1445 aa19.2■□□□□ 0.66
CNOT9-201ENST00000273064 PRG4Q92954 1404 aaPredicted RBP19.19■□□□□ 0.66
CNOT9-201ENST00000273064 SOX12O15370 315 aa19.19■□□□□ 0.66
CNOT9-201ENST00000273064 NBPF1Q3BBV0 1214 aa19.17■□□□□ 0.66
CNOT9-201ENST00000273064 RCAN3Q9UKA8 241 aa19.17■□□□□ 0.66
CNOT9-201ENST00000273064 CDK13Q14004 1512 aaKnown RBP19.15■□□□□ 0.66
CNOT9-201ENST00000273064 PRDM2Q13029 1718 aa19.15■□□□□ 0.66
CNOT9-201ENST00000273064 TRAK1Q9UPV9 953 aa19.15■□□□□ 0.66
CNOT9-201ENST00000273064 SPAG9O60271 1321 aaKnown RBP19.15■□□□□ 0.66
CNOT9-201ENST00000273064 CCDC7Q96M83 1385 aa19.15■□□□□ 0.66
CNOT9-201ENST00000273064 AFAP1Q8N556 730 aa19.15■□□□□ 0.66
CNOT9-201ENST00000273064 POGKQ9P215 609 aa19.15■□□□□ 0.66
CNOT9-201ENST00000273064 KTN1Q86UP2 1357 aaKnown RBP19.14■□□□□ 0.65
CNOT9-201ENST00000273064 CDCA8Q53HL2 280 aa19.14■□□□□ 0.65
CNOT9-201ENST00000273064 NUDCQ9Y266 331 aa19.14■□□□□ 0.65
CNOT9-201ENST00000273064 PEG3Q9GZU2 1588 aa19.14■□□□□ 0.65
CNOT9-201ENST00000273064 ARID4BQ4LE39 1312 aaPredicted RBP19.13■□□□□ 0.65
CNOT9-201ENST00000273064 FYCO1Q9BQS8 1478 aa19.13■□□□□ 0.65
CNOT9-201ENST00000273064 ZBTB7CA1YPR0 619 aa19.13■□□□□ 0.65
CNOT9-201ENST00000273064 NAIPQ13075 1403 aa19.12■□□□□ 0.65
CNOT9-201ENST00000273064 SRPK2P78362 688 aaKnown RBP19.12■□□□□ 0.65
CNOT9-201ENST00000273064 PCF11O94913 1555 aaKnown RBP19.12■□□□□ 0.65
CNOT9-201ENST00000273064 RRP7AQ9Y3A4 280 aaKnown RBP19.11■□□□□ 0.65
CNOT9-201ENST00000273064 MORC1Q86VD1 984 aa19.1■□□□□ 0.65
CNOT9-201ENST00000273064 NLRP13Q86W25 1043 aa19.09■□□□□ 0.65
CNOT9-201ENST00000273064 EXOC6Q8TAG9 804 aa19.09■□□□□ 0.65
CNOT9-201ENST00000273064 KIF15Q9NS87 1388 aa19.09■□□□□ 0.65
CNOT9-201ENST00000273064 C14orf37Q86TY3 774 aa19.08■□□□□ 0.65
CNOT9-201ENST00000273064 CCDC144AA2RUR9 1427 aa19.07■□□□□ 0.64
CNOT9-201ENST00000273064 PTPRKQ15262 1439 aa19.07■□□□□ 0.64
CNOT9-201ENST00000273064 ANKRD50Q9ULJ7 1429 aa19.07■□□□□ 0.64
CNOT9-201ENST00000273064 HFM1A2PYH4 1435 aa19.07■□□□□ 0.64
CNOT9-201ENST00000273064 CLUAP1Q96AJ1 413 aa19.07■□□□□ 0.64
CNOT9-201ENST00000273064 NOP58Q9Y2X3 529 aaKnown RBP19.07■□□□□ 0.64
CNOT9-201ENST00000273064 RALBP1Q15311 655 aa19.06■□□□□ 0.64
CNOT9-201ENST00000273064 CDCA7LQ96GN5 454 aa19.05■□□□□ 0.64
CNOT9-201ENST00000273064 HSP90AA1P07900 732 aaKnown RBP19.05■□□□□ 0.64
CNOT9-201ENST00000273064 CFAP53Q96M91 514 aa19.05■□□□□ 0.64
CNOT9-201ENST00000273064 GRIN2BQ13224 1484 aa19.04■□□□□ 0.64
CNOT9-201ENST00000273064 BCL2L13Q9BXK5 485 aa19.04■□□□□ 0.64
CNOT9-201ENST00000273064 NUTM2FA1L443 756 aa19.04■□□□□ 0.64
CNOT9-201ENST00000273064 UPF2Q9HAU5 1272 aaKnown RBP19.03■□□□□ 0.64
CNOT9-201ENST00000273064 RTN4Q9NQC3 1192 aaKnown RBP19.03■□□□□ 0.64
CNOT9-201ENST00000273064 ABCA10Q8WWZ4 1543 aa19.03■□□□□ 0.64
CNOT9-201ENST00000273064 URB2Q14146 1524 aaKnown RBP19.02■□□□□ 0.64
CNOT9-201ENST00000273064 U2AF1L5P0DN76 240 aaPredicted RBP19.02■□□□□ 0.64
CNOT9-201ENST00000273064 U2AF1Q01081 240 aaKnown RBP eCLIP19.02■□□□□ 0.64
CNOT9-201ENST00000273064 ZBED9Q6R2W3 1325 aa19.02■□□□□ 0.63
CNOT9-201ENST00000273064 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
CNOT9-201ENST00000273064 FTSJ3Q8IY81 847 aaKnown RBP19.01■□□□□ 0.63
CNOT9-201ENST00000273064 KANK1Q14678 1352 aa19.01■□□□□ 0.63
CNOT9-201ENST00000273064 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
CNOT9-201ENST00000273064 MYBBP1AQ9BQG0 1328 aaKnown RBP18.99■□□□□ 0.63
CNOT9-201ENST00000273064 WASHC2CQ9Y4E1 1318 aa18.99■□□□□ 0.63
CNOT9-201ENST00000273064 SPRYD3Q8NCJ5 442 aa18.98■□□□□ 0.63
CNOT9-201ENST00000273064 TMEM132EQ6IEE7 984 aa18.98■□□□□ 0.63
CNOT9-201ENST00000273064 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
CNOT9-201ENST00000273064 APAF1O14727 1248 aa18.97■□□□□ 0.63
CNOT9-201ENST00000273064 PLB1Q6P1J6 1458 aa18.97■□□□□ 0.63
CNOT9-201ENST00000273064 SLC4A3P48751 1232 aa18.97■□□□□ 0.63
CNOT9-201ENST00000273064 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
CNOT9-201ENST00000273064 MAPK8IP3Q9UPT6 1336 aa18.96■□□□□ 0.63
CNOT9-201ENST00000273064 EPRSP07814 1512 aaKnown RBP18.96■□□□□ 0.63
CNOT9-201ENST00000273064 CYB5RLQ6IPT4 315 aa18.96■□□□□ 0.63
CNOT9-201ENST00000273064 RSPH4AQ5TD94 716 aa18.95■□□□□ 0.62
CNOT9-201ENST00000273064 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
CNOT9-201ENST00000273064 CFAP70Q5T0N1 1121 aa18.93■□□□□ 0.62
CNOT9-201ENST00000273064 AKNAQ7Z591 1439 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms