RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 PLB1Q6P1J6 1458 aa19.8■□□□□ 0.76
PDLIM2-201ENST00000265810 EPRSP07814 1512 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-201ENST00000265810 FAM69CQ0P6D2 419 aa19.8■□□□□ 0.76
PDLIM2-201ENST00000265810 TROQ12816 1431 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-201ENST00000265810 HECW1Q76N89 1606 aa19.78■□□□□ 0.76
PDLIM2-201ENST00000265810 PCF11O94913 1555 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-201ENST00000265810 WDR62O43379 1518 aa19.77■□□□□ 0.76
PDLIM2-201ENST00000265810 UACAQ9BZF9 1416 aa19.77■□□□□ 0.76
PDLIM2-201ENST00000265810 FAM9BQ8IZU0 186 aa19.76■□□□□ 0.75
PDLIM2-201ENST00000265810 EHBP1L1Q8N3D4 1523 aa19.76■□□□□ 0.75
PDLIM2-201ENST00000265810 L3MBTL2Q969R5 705 aa19.76■□□□□ 0.75
PDLIM2-201ENST00000265810 AFAP1Q8N556 730 aa19.73■□□□□ 0.75
PDLIM2-201ENST00000265810 WASHC2CQ9Y4E1 1318 aa19.72■□□□□ 0.75
PDLIM2-201ENST00000265810 TMC1Q8TDI8 760 aa19.71■□□□□ 0.75
PDLIM2-201ENST00000265810 MYT1Q01538 1121 aa19.71■□□□□ 0.75
PDLIM2-201ENST00000265810 KIF15Q9NS87 1388 aa19.7■□□□□ 0.74
PDLIM2-201ENST00000265810 MRS2Q9HD23 443 aa19.69■□□□□ 0.74
PDLIM2-201ENST00000265810 HNRNPUQ00839 825 aaKnown RBP eCLIP19.69■□□□□ 0.74
PDLIM2-201ENST00000265810 ARHGAP5Q13017 1502 aa19.69■□□□□ 0.74
PDLIM2-201ENST00000265810 GTF3C3Q9Y5Q9 886 aa19.68■□□□□ 0.74
PDLIM2-201ENST00000265810 EIF4G3O43432 1585 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-201ENST00000265810 MIA2Q96PC5 1412 aa19.67■□□□□ 0.74
PDLIM2-201ENST00000265810 HSPA5P11021 654 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-201ENST00000265810 ADAMTS12P58397 1594 aa19.67■□□□□ 0.74
PDLIM2-201ENST00000265810 ANKRD50Q9ULJ7 1429 aa19.64■□□□□ 0.73
PDLIM2-201ENST00000265810 CDCA8Q53HL2 280 aa19.63■□□□□ 0.73
PDLIM2-201ENST00000265810 SALL2Q9Y467 1007 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-201ENST00000265810 NEFMP07197 916 aa19.62■□□□□ 0.73
PDLIM2-201ENST00000265810 SUPT6HQ7KZ85 1726 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-201ENST00000265810 MAP3K1Q13233 1512 aa19.61■□□□□ 0.73
PDLIM2-201ENST00000265810 POGKQ9P215 609 aa19.6■□□□□ 0.73
PDLIM2-201ENST00000265810 ABCA5Q8WWZ7 1642 aa19.6■□□□□ 0.73
PDLIM2-201ENST00000265810 ARHGEF11O15085 1522 aa19.58■□□□□ 0.73
PDLIM2-201ENST00000265810 CCDC144AA2RUR9 1427 aa19.57■□□□□ 0.72
PDLIM2-201ENST00000265810 TARBP1Q13395 1621 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-201ENST00000265810 KNSTRNQ9Y448 316 aa19.56■□□□□ 0.72
PDLIM2-201ENST00000265810 ROCK2O75116 1388 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-201ENST00000265810 NUTM2DQ5VT03 806 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-201ENST00000265810 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
PDLIM2-201ENST00000265810 TMF1P82094 1093 aa19.55■□□□□ 0.72
PDLIM2-201ENST00000265810 C9orf84Q5VXU9 1444 aa19.54■□□□□ 0.72
PDLIM2-201ENST00000265810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.72
PDLIM2-201ENST00000265810 SAFB2Q14151 953 aaKnown RBP eCLIP19.54■□□□□ 0.72
PDLIM2-201ENST00000265810 HDGFP51858 240 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-201ENST00000265810 C14orf37Q86TY3 774 aa19.53■□□□□ 0.72
PDLIM2-201ENST00000265810 DAPK1P53355 1430 aa19.53■□□□□ 0.72
PDLIM2-201ENST00000265810 UGGT2Q9NYU1 1516 aa19.53■□□□□ 0.72
PDLIM2-201ENST00000265810 STK26Q9P289 416 aa19.53■□□□□ 0.72
PDLIM2-201ENST00000265810 WDR43Q15061 677 aaKnown RBP eCLIP19.52■□□□□ 0.71
PDLIM2-201ENST00000265810 HFM1A2PYH4 1435 aa19.51■□□□□ 0.71
PDLIM2-201ENST00000265810 PBRM1Q86U86 1689 aa19.51■□□□□ 0.71
PDLIM2-201ENST00000265810 SCAPERQ9BY12 1400 aa19.5■□□□□ 0.71
PDLIM2-201ENST00000265810 RAPGEF3O95398 923 aa19.5■□□□□ 0.71
PDLIM2-201ENST00000265810 NUP160Q12769 1436 aa19.5■□□□□ 0.71
PDLIM2-201ENST00000265810 SLC24A1O60721 1099 aa19.49■□□□□ 0.71
PDLIM2-201ENST00000265810 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-201ENST00000265810 NUP153P49790 1475 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-201ENST00000265810 PLEKHH2Q8IVE3 1493 aa19.48■□□□□ 0.71
PDLIM2-201ENST00000265810 ATP10BO94823 1461 aa19.47■□□□□ 0.71
PDLIM2-201ENST00000265810 KIAA0556O60303 1618 aa19.46■□□□□ 0.71
PDLIM2-201ENST00000265810 SENP3-EIF4A1A0A087X0R7 540 aa19.46■□□□□ 0.71
PDLIM2-201ENST00000265810 CC2D1BQ5T0F9 858 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-201ENST00000265810 NAIPQ13075 1403 aa19.45■□□□□ 0.7
PDLIM2-201ENST00000265810 RAPGEF6Q8TEU7 1601 aa19.45■□□□□ 0.7
PDLIM2-201ENST00000265810 PLEKHG5O94827 1062 aa19.44■□□□□ 0.7
PDLIM2-201ENST00000265810 ERICH6Q7L0X2 663 aa19.44■□□□□ 0.7
PDLIM2-201ENST00000265810 CAMSAP2Q08AD1 1489 aa19.43■□□□□ 0.7
PDLIM2-201ENST00000265810 PTPN23Q9H3S7 1636 aa19.42■□□□□ 0.7
PDLIM2-201ENST00000265810 DISP1Q96F81 1524 aa19.42■□□□□ 0.7
PDLIM2-201ENST00000265810 ABCC5O15440 1437 aa19.42■□□□□ 0.7
PDLIM2-201ENST00000265810 SRPK2P78362 688 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-201ENST00000265810 KIF14Q15058 1648 aa19.42■□□□□ 0.7
PDLIM2-201ENST00000265810 CANXP27824 592 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-201ENST00000265810 CD109Q6YHK3 1445 aa19.41■□□□□ 0.7
PDLIM2-201ENST00000265810 ST20-MTHFSA0A0A6YYL1 179 aa19.4■□□□□ 0.7
PDLIM2-201ENST00000265810 TNNT2P45379 298 aaPredicted RBP19.39■□□□□ 0.69
PDLIM2-201ENST00000265810 ROCK1Q13464 1354 aa19.38■□□□□ 0.69
PDLIM2-201ENST00000265810 GPATCH8Q9UKJ3 1502 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-201ENST00000265810 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
PDLIM2-201ENST00000265810 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-201ENST00000265810 CCDC141Q6ZP82 1450 aa19.37■□□□□ 0.69
PDLIM2-201ENST00000265810 TRAK1Q9UPV9 953 aa19.36■□□□□ 0.69
PDLIM2-201ENST00000265810 PPM1GO15355 546 aaPredicted RBP19.36■□□□□ 0.69
PDLIM2-201ENST00000265810 FKBP8Q14318 412 aa19.35■□□□□ 0.69
PDLIM2-201ENST00000265810 CEP170Q5SW79 1584 aa19.35■□□□□ 0.69
PDLIM2-201ENST00000265810 VGFO15240 615 aaPredicted RBP19.34■□□□□ 0.69
PDLIM2-201ENST00000265810 ZBTB7CA1YPR0 619 aa19.32■□□□□ 0.68
PDLIM2-201ENST00000265810 EID1Q9Y6B2 187 aa19.31■□□□□ 0.68
PDLIM2-201ENST00000265810 CFAP53Q96M91 514 aa19.31■□□□□ 0.68
PDLIM2-201ENST00000265810 NCOA1Q15788 1441 aa19.31■□□□□ 0.68
PDLIM2-201ENST00000265810 KIAA1107Q9UPP5 1409 aa19.31■□□□□ 0.68
PDLIM2-201ENST00000265810 AKNAQ7Z591 1439 aa19.3■□□□□ 0.68
PDLIM2-201ENST00000265810 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
PDLIM2-201ENST00000265810 USP47Q96K76 1375 aa19.3■□□□□ 0.68
PDLIM2-201ENST00000265810 ADGRL1O94910 1474 aa19.3■□□□□ 0.68
PDLIM2-201ENST00000265810 ASXL2Q76L83 1435 aa19.29■□□□□ 0.68
PDLIM2-201ENST00000265810 PTPRKQ15262 1439 aa19.28■□□□□ 0.68
PDLIM2-201ENST00000265810 SAMD9Q5K651 1589 aa19.27■□□□□ 0.67
PDLIM2-201ENST00000265810 FANCAO15360 1455 aa19.26■□□□□ 0.67
PDLIM2-201ENST00000265810 CCER2I3L3R5 266 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms