RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS13C-202ENST00000261517 FGD5Q6ZNL6 1462 aa5.59□□□□□ -1.51
VPS13C-202ENST00000261517 AEBP2Q6ZN18 517 aaPredicted RBP5.59□□□□□ -1.52
VPS13C-202ENST00000261517 CHIC2Q9UKJ5 165 aa5.59□□□□□ -1.52
VPS13C-202ENST00000261517 PDE3BQ13370 1112 aa5.58□□□□□ -1.52
VPS13C-202ENST00000261517 AQRO60306 1485 aaKnown RBP eCLIP5.58□□□□□ -1.521e-6■■■■■ 33.2
VPS13C-202ENST00000261517 CHMP4CQ96CF2 233 aa5.58□□□□□ -1.52
VPS13C-202ENST00000261517 THOC2Q8NI27 1593 aaKnown RBP5.58□□□□□ -1.52
VPS13C-202ENST00000261517 LMOD3Q0VAK6 560 aa5.58□□□□□ -1.52
VPS13C-202ENST00000261517 RRP7BPQ9NSQ0 103 aa5.58□□□□□ -1.52
VPS13C-202ENST00000261517 AAMPQ13685 434 aa5.58□□□□□ -1.52
VPS13C-202ENST00000261517 WWC1Q8IX03 1113 aa5.58□□□□□ -1.52
VPS13C-202ENST00000261517 MIA2Q96PC5 1412 aa5.58□□□□□ -1.52
VPS13C-202ENST00000261517 POGKQ9P215 609 aa5.57□□□□□ -1.52
VPS13C-202ENST00000261517 IPO8O15397 1037 aaKnown RBP5.57□□□□□ -1.52
VPS13C-202ENST00000261517 DDX10Q13206 875 aaKnown RBP5.57□□□□□ -1.52
VPS13C-202ENST00000261517 HDGFL2Q7Z4V5 671 aaPredicted RBP5.57□□□□□ -1.52
VPS13C-202ENST00000261517 GLIPR1L2Q4G1C9 344 aa5.57□□□□□ -1.52
VPS13C-202ENST00000261517 SYNJ2O15056 1496 aa5.56□□□□□ -1.52
VPS13C-202ENST00000261517 PTPRGP23470 1445 aa5.56□□□□□ -1.52
VPS13C-202ENST00000261517 BIVM-ERCC5R4GMW8 1640 aa5.56□□□□□ -1.52
VPS13C-202ENST00000261517 ARID3CA6NKF2 412 aa5.56□□□□□ -1.52
VPS13C-202ENST00000261517 PPM1GO15355 546 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-202ENST00000261517 KCNH8Q96L42 1107 aa5.56□□□□□ -1.52
VPS13C-202ENST00000261517 PLPPR3Q6T4P5 718 aa5.55□□□□□ -1.52
VPS13C-202ENST00000261517 TERF2IPQ9NYB0 399 aa5.55□□□□□ -1.52
VPS13C-202ENST00000261517 FTSJ3Q8IY81 847 aaKnown RBP5.55□□□□□ -1.52
VPS13C-202ENST00000261517 CDK11BP21127 795 aaKnown RBP5.55□□□□□ -1.52
VPS13C-202ENST00000261517 MAGI1Q96QZ7 1491 aaPredicted RBP5.55□□□□□ -1.52
VPS13C-202ENST00000261517 NRDCO43847 1150 aa5.55□□□□□ -1.52
VPS13C-202ENST00000261517 SPAG9O60271 1321 aaKnown RBP5.55□□□□□ -1.52
VPS13C-202ENST00000261517 RRBP1Q9P2E9 1410 aaKnown RBP5.55□□□□□ -1.52
VPS13C-202ENST00000261517 C14orf37Q86TY3 774 aa5.54□□□□□ -1.52
VPS13C-202ENST00000261517 GOLGA6L6A8MZA4 724 aa5.54□□□□□ -1.52
VPS13C-202ENST00000261517 CCDC144AA2RUR9 1427 aa5.54□□□□□ -1.52
VPS13C-202ENST00000261517 EID1Q9Y6B2 187 aa5.54□□□□□ -1.52
VPS13C-202ENST00000261517 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.54□□□□□ -1.52
VPS13C-202ENST00000261517 PPP4R2Q9NY27 417 aa5.54□□□□□ -1.52
VPS13C-202ENST00000261517 FAM9BQ8IZU0 186 aa5.54□□□□□ -1.52
VPS13C-202ENST00000261517 MCCP23508 829 aa5.54□□□□□ -1.52
VPS13C-202ENST00000261517 KDM2AQ9Y2K7 1162 aa5.54□□□□□ -1.52
VPS13C-202ENST00000261517 HFM1A2PYH4 1435 aa5.54□□□□□ -1.52
VPS13C-202ENST00000261517 KIF15Q9NS87 1388 aa5.53□□□□□ -1.52
VPS13C-202ENST00000261517 ABCA10Q8WWZ4 1543 aa5.53□□□□□ -1.52
VPS13C-202ENST00000261517 NUP155O75694 1391 aa5.53□□□□□ -1.52
VPS13C-202ENST00000261517 CNGB1Q14028 1251 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-202ENST00000261517 L1TD1Q5T7N2 865 aaKnown RBP5.53□□□□□ -1.52
VPS13C-202ENST00000261517 JPH4Q96JJ6 628 aa5.53□□□□□ -1.52
VPS13C-202ENST00000261517 ITSN2Q9NZM3 1697 aa5.53□□□□□ -1.52
VPS13C-202ENST00000261517 FKBP8Q14318 412 aa5.53□□□□□ -1.52
VPS13C-202ENST00000261517 RAB3GAP2Q9H2M9 1393 aa5.52□□□□□ -1.53
VPS13C-202ENST00000261517 ZRSR1Q15695 479 aaKnown RBP5.52□□□□□ -1.53
VPS13C-202ENST00000261517 TOPBP1Q92547 1522 aa5.52□□□□□ -1.53
VPS13C-202ENST00000261517 DAPK1P53355 1430 aa5.52□□□□□ -1.53
VPS13C-202ENST00000261517 IQGAP2Q13576 1575 aa5.51□□□□□ -1.53
VPS13C-202ENST00000261517 VGFO15240 615 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-202ENST00000261517 LRRC9Q6ZRR7 1453 aa5.51□□□□□ -1.53
VPS13C-202ENST00000261517 FGD6Q6ZV73 1430 aa5.51□□□□□ -1.53
VPS13C-202ENST00000261517 TDRD9Q8NDG6 1382 aaKnown RBP5.51□□□□□ -1.53
VPS13C-202ENST00000261517 WASHC2AQ641Q2 1341 aa5.51□□□□□ -1.53
VPS13C-202ENST00000261517 WASHC2CQ9Y4E1 1318 aa5.51□□□□□ -1.53
VPS13C-202ENST00000261517 HTATSF1O43719 755 aaKnown RBP5.51□□□□□ -1.53
VPS13C-202ENST00000261517 SYNJ1O43426 1573 aa5.51□□□□□ -1.53
VPS13C-202ENST00000261517 CTTNBP2Q8WZ74 1663 aa5.51□□□□□ -1.53
VPS13C-202ENST00000261517 IGF1RP08069 1367 aa5.5□□□□□ -1.53
VPS13C-202ENST00000261517 MPHOSPH9Q99550 1183 aa5.5□□□□□ -1.53
VPS13C-202ENST00000261517 CNTLNQ9NXG0 1405 aa5.5□□□□□ -1.53
VPS13C-202ENST00000261517 CCDC34Q96HJ3 373 aa5.5□□□□□ -1.53
VPS13C-202ENST00000261517 OSCARQ8IYS5 282 aa5.5□□□□□ -1.53
VPS13C-202ENST00000261517 GPATCH3Q96I76 525 aa5.5□□□□□ -1.53
VPS13C-202ENST00000261517 FHOD3Q2V2M9 1422 aa5.5□□□□□ -1.53
VPS13C-202ENST00000261517 KIF14Q15058 1648 aa5.5□□□□□ -1.53
VPS13C-202ENST00000261517 CGNL1Q0VF96 1302 aa5.49□□□□□ -1.53
VPS13C-202ENST00000261517 NLRP13Q86W25 1043 aa5.49□□□□□ -1.53
VPS13C-202ENST00000261517 KIAA0586Q9BVV6 1533 aa5.49□□□□□ -1.53
VPS13C-202ENST00000261517 PRXQ9BXM0 1461 aa5.49□□□□□ -1.53
VPS13C-202ENST00000261517 ROCK1Q13464 1354 aa5.49□□□□□ -1.53
VPS13C-202ENST00000261517 PKD2Q13563 968 aa5.49□□□□□ -1.53
VPS13C-202ENST00000261517 MORC1Q86VD1 984 aa5.49□□□□□ -1.53
VPS13C-202ENST00000261517 RTF1Q92541 710 aaKnown RBP5.49□□□□□ -1.53
VPS13C-202ENST00000261517 HMMRO75330 724 aa5.49□□□□□ -1.53
VPS13C-202ENST00000261517 TIAM1Q13009 1591 aa5.49□□□□□ -1.53
VPS13C-202ENST00000261517 USP35Q9P2H5 1018 aa5.49□□□□□ -1.53
VPS13C-202ENST00000261517 LRRFIP1Q32MZ4 808 aaKnown RBP5.49□□□□□ -1.53
VPS13C-202ENST00000261517 PMFBP1Q8TBY8 1022 aa5.48□□□□□ -1.53
VPS13C-202ENST00000261517 CCDC141Q6ZP82 1450 aa5.48□□□□□ -1.53
VPS13C-202ENST00000261517 DCAF11Q8TEB1 546 aa5.48□□□□□ -1.53
VPS13C-202ENST00000261517 POGZQ7Z3K3 1410 aa5.48□□□□□ -1.53
VPS13C-202ENST00000261517 CSPP1Q1MSJ5 1256 aa5.48□□□□□ -1.53
VPS13C-202ENST00000261517 EVC2Q86UK5 1308 aa5.48□□□□□ -1.53
VPS13C-202ENST00000261517 PPP6R1Q9UPN7 881 aa5.47□□□□□ -1.53
VPS13C-202ENST00000261517 KIF3AQ9Y496 699 aa5.47□□□□□ -1.53
VPS13C-202ENST00000261517 TROQ12816 1431 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-202ENST00000261517 CCDC7Q96M83 1385 aa5.47□□□□□ -1.53
VPS13C-202ENST00000261517 IL27Q8NEV9 243 aa5.46□□□□□ -1.53
VPS13C-202ENST00000261517 ARHGAP5Q13017 1502 aa5.46□□□□□ -1.53
VPS13C-202ENST00000261517 SNAPC4Q5SXM2 1469 aa5.46□□□□□ -1.53
VPS13C-202ENST00000261517 RGL3Q3MIN7 710 aa5.46□□□□□ -1.53
VPS13C-202ENST00000261517 NINLQ9Y2I6 1382 aa5.46□□□□□ -1.53
VPS13C-202ENST00000261517 AKNAQ7Z591 1439 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms