RNA–Protein interactions for RNA: ENST00000261303.12

PSMC1-201, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC1, Length 4,448 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-201ENST00000261303 FRAT1Q92837 279 aaPredicted RBP18.32■□□□□ 0.52
PSMC1-201ENST00000261303 SPAG9O60271 1321 aaKnown RBP18.32■□□□□ 0.52
PSMC1-201ENST00000261303 BECN1Q14457 450 aa18.32■□□□□ 0.52
PSMC1-201ENST00000261303 ZBTB7CA1YPR0 619 aa18.31■□□□□ 0.52
PSMC1-201ENST00000261303 MORC1Q86VD1 984 aa18.31■□□□□ 0.52
PSMC1-201ENST00000261303 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
PSMC1-201ENST00000261303 SRPK2P78362 688 aaKnown RBP18.31■□□□□ 0.52
PSMC1-201ENST00000261303 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
PSMC1-201ENST00000261303 PTPRGP23470 1445 aa18.3■□□□□ 0.52
PSMC1-201ENST00000261303 MLECQ14165 292 aa18.29■□□□□ 0.52
PSMC1-201ENST00000261303 ERICH6BQ5W0A0 696 aa18.29■□□□□ 0.52
PSMC1-201ENST00000261303 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
PSMC1-201ENST00000261303 LAS1LQ9Y4W2 734 aaKnown RBP18.29■□□□□ 0.52
PSMC1-201ENST00000261303 PHLDB1Q86UU1 1377 aa18.28■□□□□ 0.52
PSMC1-201ENST00000261303 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
PSMC1-201ENST00000261303 FGD6Q6ZV73 1430 aa18.28■□□□□ 0.52
PSMC1-201ENST00000261303 RGS3P49796 1198 aa18.28■□□□□ 0.52
PSMC1-201ENST00000261303 HDGFP51858 240 aaKnown RBP18.27■□□□□ 0.52
PSMC1-201ENST00000261303 PNNQ9H307 717 aaKnown RBP18.26■□□□□ 0.51
PSMC1-201ENST00000261303 LRRC9Q6ZRR7 1453 aa18.26■□□□□ 0.51
PSMC1-201ENST00000261303 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
PSMC1-201ENST00000261303 MS4A1P11836 297 aa18.25■□□□□ 0.51
PSMC1-201ENST00000261303 ANP32EQ9BTT0 268 aa18.25■□□□□ 0.51
PSMC1-201ENST00000261303 MYOM3Q5VTT5 1437 aa18.24■□□□□ 0.51
PSMC1-201ENST00000261303 PRXQ9BXM0 1461 aa18.24■□□□□ 0.51
PSMC1-201ENST00000261303 NLRP13Q86W25 1043 aa18.24■□□□□ 0.51
PSMC1-201ENST00000261303 STK26Q9P289 416 aa18.24■□□□□ 0.51
PSMC1-201ENST00000261303 ST20-MTHFSA0A0A6YYL1 179 aa18.22■□□□□ 0.51
PSMC1-201ENST00000261303 CASKIN1Q8WXD9 1431 aa18.21■□□□□ 0.51
PSMC1-201ENST00000261303 RCAN3Q9UKA8 241 aa18.21■□□□□ 0.51
PSMC1-201ENST00000261303 CCDC144AA2RUR9 1427 aa18.2■□□□□ 0.5
PSMC1-201ENST00000261303 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.52e-6■■□□□ 14.2
PSMC1-201ENST00000261303 CHMP4BQ9H444 224 aaKnown RBP18.2■□□□□ 0.5
PSMC1-201ENST00000261303 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
PSMC1-201ENST00000261303 ARXQ96QS3 562 aa18.18■□□□□ 0.5
PSMC1-201ENST00000261303 HMGXB3Q12766 1538 aa18.17■□□□□ 0.5
PSMC1-201ENST00000261303 PRKRIP1Q9H875 184 aaPredicted RBP18.17■□□□□ 0.5
PSMC1-201ENST00000261303 ZNF644Q9H582 1327 aaPredicted RBP18.17■□□□□ 0.5
PSMC1-201ENST00000261303 UACAQ9BZF9 1416 aa18.17■□□□□ 0.5
PSMC1-201ENST00000261303 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
PSMC1-201ENST00000261303 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
PSMC1-201ENST00000261303 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
PSMC1-201ENST00000261303 CUX1P39880 1505 aa18.16■□□□□ 0.5
PSMC1-201ENST00000261303 WASHC2CQ9Y4E1 1318 aa18.16■□□□□ 0.5
PSMC1-201ENST00000261303 RRBP1Q9P2E9 1410 aaKnown RBP18.15■□□□□ 0.5
PSMC1-201ENST00000261303 LMOD2Q6P5Q4 547 aa18.14■□□□□ 0.5
PSMC1-201ENST00000261303 NOP58Q9Y2X3 529 aaKnown RBP18.14■□□□□ 0.49
PSMC1-201ENST00000261303 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
PSMC1-201ENST00000261303 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
PSMC1-201ENST00000261303 USP47Q96K76 1375 aa18.13■□□□□ 0.49
PSMC1-201ENST00000261303 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
PSMC1-201ENST00000261303 KIF15Q9NS87 1388 aa18.12■□□□□ 0.49
PSMC1-201ENST00000261303 NCOA2Q15596 1464 aa18.12■□□□□ 0.49
PSMC1-201ENST00000261303 PDE3BQ13370 1112 aa18.12■□□□□ 0.49
PSMC1-201ENST00000261303 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
PSMC1-201ENST00000261303 NESP48681 1621 aa18.1■□□□□ 0.49
PSMC1-201ENST00000261303 FYCO1Q9BQS8 1478 aa18.1■□□□□ 0.49
PSMC1-201ENST00000261303 A0A0G2JS52 829 aa18.1■□□□□ 0.49
PSMC1-201ENST00000261303 SOX12O15370 315 aa18.09■□□□□ 0.49
PSMC1-201ENST00000261303 HAP1P54257 671 aaPredicted RBP18.09■□□□□ 0.49
PSMC1-201ENST00000261303 MYBBP1AQ9BQG0 1328 aaKnown RBP18.09■□□□□ 0.49
PSMC1-201ENST00000261303 CASC1Q6TDU7 716 aa18.09■□□□□ 0.49
PSMC1-201ENST00000261303 GOLGA6L22H0YM25 854 aa18.08■□□□□ 0.49
PSMC1-201ENST00000261303 GOLGA2Q08379 1002 aa18.07■□□□□ 0.48
PSMC1-201ENST00000261303 PANK3Q9H999 370 aa18.07■□□□□ 0.48
PSMC1-201ENST00000261303 TOPBP1Q92547 1522 aa18.07■□□□□ 0.48
PSMC1-201ENST00000261303 TRHP20396 242 aaPredicted RBP18.07■□□□□ 0.48
PSMC1-201ENST00000261303 TERF2IPQ9NYB0 399 aa18.06■□□□□ 0.48
PSMC1-201ENST00000261303 TRAK1Q9UPV9 953 aa18.06■□□□□ 0.48
PSMC1-201ENST00000261303 POLA1P09884 1462 aaPredicted RBP18.06■□□□□ 0.48
PSMC1-201ENST00000261303 IPO8O15397 1037 aaKnown RBP18.03■□□□□ 0.48
PSMC1-201ENST00000261303 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
PSMC1-201ENST00000261303 ANKRD50Q9ULJ7 1429 aa18.03■□□□□ 0.48
PSMC1-201ENST00000261303 NUTM2DQ5VT03 806 aaPredicted RBP18.03■□□□□ 0.48
PSMC1-201ENST00000261303 EFCAB5A4FU69 1503 aa18.03■□□□□ 0.48
PSMC1-201ENST00000261303 TCERG1O14776 1098 aaKnown RBP18.02■□□□□ 0.48
PSMC1-201ENST00000261303 BICRAQ9NZM4 1560 aa18.02■□□□□ 0.47
PSMC1-201ENST00000261303 ZBED9Q6R2W3 1325 aa18.01■□□□□ 0.47
PSMC1-201ENST00000261303 CALD1Q05682 793 aaKnown RBP18.01■□□□□ 0.47
PSMC1-201ENST00000261303 CC2D2AQ9P2K1 1620 aa18■□□□□ 0.47
PSMC1-201ENST00000261303 NCLP19338 710 aaKnown RBP18■□□□□ 0.47
PSMC1-201ENST00000261303 CCDC146Q8IYE0 955 aa17.99■□□□□ 0.47
PSMC1-201ENST00000261303 CCDC7Q96M83 1385 aa17.99■□□□□ 0.47
PSMC1-201ENST00000261303 RTF1Q92541 710 aaKnown RBP17.99■□□□□ 0.47
PSMC1-201ENST00000261303 VGFO15240 615 aaPredicted RBP17.98■□□□□ 0.47
PSMC1-201ENST00000261303 KIF7Q2M1P5 1343 aa17.98■□□□□ 0.47
PSMC1-201ENST00000261303 OSCARQ8IYS5 282 aa17.97■□□□□ 0.47
PSMC1-201ENST00000261303 STAC3Q96MF2 364 aa17.95■□□□□ 0.46
PSMC1-201ENST00000261303 RWDD1Q9H446 243 aaPredicted RBP17.95■□□□□ 0.46
PSMC1-201ENST00000261303 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
PSMC1-201ENST00000261303 MRC2Q9UBG0 1479 aa17.94■□□□□ 0.46
PSMC1-201ENST00000261303 TIAM1Q13009 1591 aa17.94■□□□□ 0.46
PSMC1-201ENST00000261303 MIA2Q96PC5 1412 aa17.93■□□□□ 0.46
PSMC1-201ENST00000261303 OS9Q13438 667 aaPredicted RBP17.93■□□□□ 0.46
PSMC1-201ENST00000261303 CENPJQ9HC77 1338 aaPredicted RBP17.93■□□□□ 0.46
PSMC1-201ENST00000261303 TRIM44Q96DX7 344 aaPredicted RBP17.92■□□□□ 0.46
PSMC1-201ENST00000261303 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
PSMC1-201ENST00000261303 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
PSMC1-201ENST00000261303 HSP90AB1P08238 724 aaKnown RBP17.92■□□□□ 0.46
PSMC1-201ENST00000261303 WASHC2AQ641Q2 1341 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms