RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 TONSLQ96HA7 1378 aa15.2■□□□□ 0.02
CHRNA1-201ENST00000261007 SIN3AQ96ST3 1273 aa15.2■□□□□ 0.02
CHRNA1-201ENST00000261007 PRG4Q92954 1404 aaPredicted RBP15.2■□□□□ 0.02
CHRNA1-201ENST00000261007 FKBP8Q14318 412 aa15.2■□□□□ 0.02
CHRNA1-201ENST00000261007 KIF14Q15058 1648 aa15.2■□□□□ 0.02
CHRNA1-201ENST00000261007 CHD1O14646 1710 aa15.19■□□□□ 0.02
CHRNA1-201ENST00000261007 ABCC5O15440 1437 aa15.19■□□□□ 0.02
CHRNA1-201ENST00000261007 ARID3CA6NKF2 412 aa15.19■□□□□ 0.02
CHRNA1-201ENST00000261007 PPP1R15AO75807 674 aaPredicted RBP15.18■□□□□ 0.02
CHRNA1-201ENST00000261007 SHROOM2Q13796 1616 aa15.18■□□□□ 0.02
CHRNA1-201ENST00000261007 GPATCH8Q9UKJ3 1502 aaKnown RBP15.18■□□□□ 0.02
CHRNA1-201ENST00000261007 CAMSAP2Q08AD1 1489 aa15.17■□□□□ 0.02
CHRNA1-201ENST00000261007 PLEKHD1A6NEE1 506 aa15.17■□□□□ 0.02
CHRNA1-201ENST00000261007 RRP7BPQ9NSQ0 103 aa15.17■□□□□ 0.02
CHRNA1-201ENST00000261007 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
CHRNA1-201ENST00000261007 ADGBQ8N7X0 1667 aa15.17■□□□□ 0.02
CHRNA1-201ENST00000261007 NEFLP07196 543 aa15.16■□□□□ 0.02
CHRNA1-201ENST00000261007 KCNH8Q96L42 1107 aa15.16■□□□□ 0.02
CHRNA1-201ENST00000261007 PTPRGP23470 1445 aa15.16■□□□□ 0.02
CHRNA1-201ENST00000261007 CCER2I3L3R5 266 aa15.16■□□□□ 0.02
CHRNA1-201ENST00000261007 CFDP1Q9UEE9 299 aaPredicted RBP15.16■□□□□ 0.02
CHRNA1-201ENST00000261007 ATP10BO94823 1461 aa15.16■□□□□ 0.02
CHRNA1-201ENST00000261007 CHIC2Q9UKJ5 165 aa15.15■□□□□ 0.02
CHRNA1-201ENST00000261007 ADGRL2O95490 1459 aa15.15■□□□□ 0.02
CHRNA1-201ENST00000261007 CROCC2H7BZ55 1655 aa15.14■□□□□ 0.01
CHRNA1-201ENST00000261007 ABCC10Q5T3U5 1492 aa15.13■□□□□ 0.01
CHRNA1-201ENST00000261007 BCANQ96GW7 911 aa15.13■□□□□ 0.01
CHRNA1-201ENST00000261007 SHANK2Q9UPX8 1470 aa15.12■□□□□ 0.01
CHRNA1-201ENST00000261007 TRIM52Q96A61 297 aa15.11■□□□□ 0.01
CHRNA1-201ENST00000261007 CDC42BPAQ5VT25 1732 aa15.11■□□□□ 0.01
CHRNA1-201ENST00000261007 KDM6BO15054 1643 aa15.11■□□□□ 0.01
CHRNA1-201ENST00000261007 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
CHRNA1-201ENST00000261007 MPHOSPH9Q99550 1183 aa15.09■□□□□ 0.01
CHRNA1-201ENST00000261007 ANKRD30AQ9BXX3 1397 aa15.09■□□□□ 0.01
CHRNA1-201ENST00000261007 NCOA1Q15788 1441 aa15.08■□□□□ 0
CHRNA1-201ENST00000261007 DENND4BO75064 1496 aaPredicted RBP15.08■□□□□ 0
CHRNA1-201ENST00000261007 ZNF644Q9H582 1327 aaPredicted RBP15.08■□□□□ 0
CHRNA1-201ENST00000261007 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
CHRNA1-201ENST00000261007 ARHGEF5Q12774 1597 aa15.06■□□□□ 0
CHRNA1-201ENST00000261007 FANCIQ9NVI1 1328 aa15.05■□□□□ -0
CHRNA1-201ENST00000261007 ABCC2Q92887 1545 aa15.04■□□□□ -0
CHRNA1-201ENST00000261007 KDM5BQ9UGL1 1544 aa15.04■□□□□ -0
CHRNA1-201ENST00000261007 CLASP1Q7Z460 1538 aa15.04■□□□□ -0
CHRNA1-201ENST00000261007 RSPH4AQ5TD94 716 aa15.04■□□□□ -0
CHRNA1-201ENST00000261007 PREX2Q70Z35 1606 aa15.03■□□□□ -0
CHRNA1-201ENST00000261007 ANP32CO43423 234 aa15.03■□□□□ -0
CHRNA1-201ENST00000261007 ANKRD30BQ9BXX2 1392 aa15.02□□□□□ -0.01
CHRNA1-201ENST00000261007 RPRD2Q5VT52 1461 aaKnown RBP15.02□□□□□ -0.01
CHRNA1-201ENST00000261007 ZNF777Q9ULD5 760 aaPredicted RBP15.01□□□□□ -0.01
CHRNA1-201ENST00000261007 C9orf84Q5VXU9 1444 aa15.01□□□□□ -0.01
CHRNA1-201ENST00000261007 UHRF1BP1LA0JNW5 1464 aa15□□□□□ -0.01
CHRNA1-201ENST00000261007 TSPY4P0CV99 314 aa14.99□□□□□ -0.01
CHRNA1-201ENST00000261007 TSPY10P0CW01 314 aa14.99□□□□□ -0.01
CHRNA1-201ENST00000261007 SLC4A1APQ9BWU0 796 aaKnown RBP14.99□□□□□ -0.01
CHRNA1-201ENST00000261007 MYT1LQ9UL68 1186 aa14.99□□□□□ -0.01
CHRNA1-201ENST00000261007 ANKRD50Q9ULJ7 1429 aa14.99□□□□□ -0.01
CHRNA1-201ENST00000261007 PZPP20742 1482 aa14.98□□□□□ -0.01
CHRNA1-201ENST00000261007 PLEKHH2Q8IVE3 1493 aa14.98□□□□□ -0.01
CHRNA1-201ENST00000261007 CCDC141Q6ZP82 1450 aa14.98□□□□□ -0.01
CHRNA1-201ENST00000261007 KDM5DQ9BY66 1539 aa14.97□□□□□ -0.01
CHRNA1-201ENST00000261007 MSH5O43196 834 aa14.97□□□□□ -0.01
CHRNA1-201ENST00000261007 CDC42BPBQ9Y5S2 1711 aa14.97□□□□□ -0.01
CHRNA1-201ENST00000261007 KIAA1107Q9UPP5 1409 aa14.97□□□□□ -0.01
CHRNA1-201ENST00000261007 ERICH6BQ5W0A0 696 aa14.96□□□□□ -0.01
CHRNA1-201ENST00000261007 MBD5Q9P267 1494 aa14.96□□□□□ -0.02
CHRNA1-201ENST00000261007 SAMD9LQ8IVG5 1584 aa14.95□□□□□ -0.02
CHRNA1-201ENST00000261007 MAST1Q9Y2H9 1570 aa14.95□□□□□ -0.02
CHRNA1-201ENST00000261007 MYO5CQ9NQX4 1742 aa14.94□□□□□ -0.02
CHRNA1-201ENST00000261007 TEX14Q8IWB6 1497 aa14.94□□□□□ -0.02
CHRNA1-201ENST00000261007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.93□□□□□ -0.02
CHRNA1-201ENST00000261007 ERCC6L2Q5T890 1561 aa14.93□□□□□ -0.02
CHRNA1-201ENST00000261007 ARHGAP5Q13017 1502 aa14.92□□□□□ -0.02
CHRNA1-201ENST00000261007 L3MBTL2Q969R5 705 aa14.91□□□□□ -0.02
CHRNA1-201ENST00000261007 KIF15Q9NS87 1388 aa14.91□□□□□ -0.02
CHRNA1-201ENST00000261007 TTC37Q6PGP7 1564 aa14.91□□□□□ -0.02
CHRNA1-201ENST00000261007 ZCCHC11Q5TAX3 1644 aaKnown RBP14.91□□□□□ -0.02
CHRNA1-201ENST00000261007 EIF4G2P78344 907 aaKnown RBP eCLIP14.91□□□□□ -0.02
CHRNA1-201ENST00000261007 PLXNC1O60486 1568 aa14.88□□□□□ -0.03
CHRNA1-201ENST00000261007 ERICH6Q7L0X2 663 aa14.88□□□□□ -0.03
CHRNA1-201ENST00000261007 ARAP3Q8WWN8 1544 aa14.88□□□□□ -0.03
CHRNA1-201ENST00000261007 FOXD1Q16676 465 aa14.87□□□□□ -0.03
CHRNA1-201ENST00000261007 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
CHRNA1-201ENST00000261007 NUP155O75694 1391 aa14.87□□□□□ -0.03
CHRNA1-201ENST00000261007 HNRNPMP52272 730 aaKnown RBP eCLIP14.87□□□□□ -0.03
CHRNA1-201ENST00000261007 PLCH2O75038 1416 aa14.86□□□□□ -0.03
CHRNA1-201ENST00000261007 PKD2Q13563 968 aa14.85□□□□□ -0.03
CHRNA1-201ENST00000261007 ARHGEF12Q9NZN5 1544 aa14.85□□□□□ -0.03
CHRNA1-201ENST00000261007 HSPA5P11021 654 aaKnown RBP14.85□□□□□ -0.03
CHRNA1-201ENST00000261007 UNC13BO14795 1591 aa14.84□□□□□ -0.03
CHRNA1-201ENST00000261007 EFCAB2Q5VUJ9 269 aa14.82□□□□□ -0.04
CHRNA1-201ENST00000261007 HIRIP3Q9BW71 556 aaPredicted RBP14.82□□□□□ -0.04
CHRNA1-201ENST00000261007 POLR1AO95602 1720 aaPredicted RBP14.82□□□□□ -0.04
CHRNA1-201ENST00000261007 DUOX2Q9NRD8 1548 aa14.82□□□□□ -0.04
CHRNA1-201ENST00000261007 PPP4R2Q9NY27 417 aa14.82□□□□□ -0.04
CHRNA1-201ENST00000261007 ABCC1P33527 1531 aa14.81□□□□□ -0.04
CHRNA1-201ENST00000261007 FAM135AQ9P2D6 1515 aa14.81□□□□□ -0.04
CHRNA1-201ENST00000261007 UHRF1BP1Q6BDS2 1440 aa14.8□□□□□ -0.04
CHRNA1-201ENST00000261007 ERBINQ96RT1 1412 aa14.8□□□□□ -0.04
CHRNA1-201ENST00000261007 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.04
CHRNA1-201ENST00000261007 NBPF8Q3BBV2 869 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms