RNA–Protein interactions for RNA: ENST00000260604.8

PNPT1-201, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 5

Gene PNPT1, Length 3,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-201ENST00000260604 KIF7Q2M1P5 1343 aa12.02□□□□□ -0.48
PNPT1-201ENST00000260604 PRG4Q92954 1404 aaPredicted RBP12.02□□□□□ -0.49
PNPT1-201ENST00000260604 ST20-MTHFSA0A0A6YYL1 179 aa12.02□□□□□ -0.49
PNPT1-201ENST00000260604 CHGAP10645 457 aaKnown RBP12.02□□□□□ -0.49
PNPT1-201ENST00000260604 NBR1Q14596 966 aa12.01□□□□□ -0.49
PNPT1-201ENST00000260604 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
PNPT1-201ENST00000260604 PRDM2Q13029 1718 aa12□□□□□ -0.49
PNPT1-201ENST00000260604 EFCAB5A4FU69 1503 aa11.99□□□□□ -0.49
PNPT1-201ENST00000260604 MAP3K1Q13233 1512 aa11.97□□□□□ -0.49
PNPT1-201ENST00000260604 CCDC7Q96M83 1385 aa11.97□□□□□ -0.49
PNPT1-201ENST00000260604 PPP4R2Q9NY27 417 aa11.97□□□□□ -0.49
PNPT1-201ENST00000260604 EPRSP07814 1512 aaKnown RBP11.97□□□□□ -0.49
PNPT1-201ENST00000260604 SNAPC4Q5SXM2 1469 aa11.96□□□□□ -0.5
PNPT1-201ENST00000260604 USP47Q96K76 1375 aa11.94□□□□□ -0.5
PNPT1-201ENST00000260604 PTPN23Q9H3S7 1636 aa11.93□□□□□ -0.5
PNPT1-201ENST00000260604 ANKRD30AQ9BXX3 1397 aa11.93□□□□□ -0.5
PNPT1-201ENST00000260604 PLB1Q6P1J6 1458 aa11.93□□□□□ -0.5
PNPT1-201ENST00000260604 GRIN2BQ13224 1484 aa11.92□□□□□ -0.5
PNPT1-201ENST00000260604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.92□□□□□ -0.5
PNPT1-201ENST00000260604 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
PNPT1-201ENST00000260604 NBPF1Q3BBV0 1214 aa11.91□□□□□ -0.5
PNPT1-201ENST00000260604 EHBP1L1Q8N3D4 1523 aa11.91□□□□□ -0.5
PNPT1-201ENST00000260604 ROCK2O75116 1388 aaKnown RBP11.9□□□□□ -0.5
PNPT1-201ENST00000260604 TNNT2P45379 298 aaPredicted RBP11.9□□□□□ -0.5
PNPT1-201ENST00000260604 MAGI3Q5TCQ9 1506 aa11.9□□□□□ -0.5
PNPT1-201ENST00000260604 SUPT6HQ7KZ85 1726 aaKnown RBP11.9□□□□□ -0.51
PNPT1-201ENST00000260604 DAPK1P53355 1430 aa11.9□□□□□ -0.51
PNPT1-201ENST00000260604 CARMIL2Q6F5E8 1435 aa11.9□□□□□ -0.51
PNPT1-201ENST00000260604 ABCC5O15440 1437 aa11.89□□□□□ -0.51
PNPT1-201ENST00000260604 CNTLNQ9NXG0 1405 aa11.89□□□□□ -0.51
PNPT1-201ENST00000260604 CUL7Q14999 1698 aa11.89□□□□□ -0.51
PNPT1-201ENST00000260604 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
PNPT1-201ENST00000260604 PLIN1O60240 522 aa11.88□□□□□ -0.51
PNPT1-201ENST00000260604 ANKRD30BQ9BXX2 1392 aa11.88□□□□□ -0.51
PNPT1-201ENST00000260604 LAMC3Q9Y6N6 1575 aa11.88□□□□□ -0.51
PNPT1-201ENST00000260604 IQGAP2Q13576 1575 aa11.87□□□□□ -0.51
PNPT1-201ENST00000260604 ANKRD50Q9ULJ7 1429 aa11.87□□□□□ -0.51
PNPT1-201ENST00000260604 CFAP43Q8NDM7 1665 aa11.86□□□□□ -0.51
PNPT1-201ENST00000260604 NEUROD2Q15784 382 aa11.86□□□□□ -0.51
PNPT1-201ENST00000260604 ANP32AP39687 249 aaKnown RBP11.86□□□□□ -0.51
PNPT1-201ENST00000260604 AKNAQ7Z591 1439 aa11.86□□□□□ -0.51
PNPT1-201ENST00000260604 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
PNPT1-201ENST00000260604 ZBED9Q6R2W3 1325 aa11.84□□□□□ -0.51
PNPT1-201ENST00000260604 KIF15Q9NS87 1388 aa11.84□□□□□ -0.51
PNPT1-201ENST00000260604 PTPRGP23470 1445 aa11.84□□□□□ -0.51
PNPT1-201ENST00000260604 WDR43Q15061 677 aaKnown RBP eCLIP11.84□□□□□ -0.51
PNPT1-201ENST00000260604 NUDCQ9Y266 331 aa11.84□□□□□ -0.51
PNPT1-201ENST00000260604 KDM6BO15054 1643 aa11.84□□□□□ -0.51
PNPT1-201ENST00000260604 PANK3Q9H999 370 aa11.83□□□□□ -0.52
PNPT1-201ENST00000260604 UGGT2Q9NYU1 1516 aa11.83□□□□□ -0.52
PNPT1-201ENST00000260604 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
PNPT1-201ENST00000260604 MIA2Q96PC5 1412 aa11.83□□□□□ -0.52
PNPT1-201ENST00000260604 CTTNBP2Q8WZ74 1663 aa11.83□□□□□ -0.52
PNPT1-201ENST00000260604 NUTM2DQ5VT03 806 aaPredicted RBP11.83□□□□□ -0.52
PNPT1-201ENST00000260604 MSH5O43196 834 aa11.82□□□□□ -0.52
PNPT1-201ENST00000260604 HECW1Q76N89 1606 aa11.82□□□□□ -0.52
PNPT1-201ENST00000260604 RTL5Q5HYW3 569 aaPredicted RBP11.82□□□□□ -0.52
PNPT1-201ENST00000260604 KNSTRNQ9Y448 316 aa11.82□□□□□ -0.52
PNPT1-201ENST00000260604 KIF21AQ7Z4S6 1674 aa11.82□□□□□ -0.52
PNPT1-201ENST00000260604 SKAP1Q86WV1 359 aa11.81□□□□□ -0.52
PNPT1-201ENST00000260604 EXOC6Q8TAG9 804 aa11.81□□□□□ -0.52
PNPT1-201ENST00000260604 DAXXQ9UER7 740 aaPredicted RBP11.81□□□□□ -0.52
PNPT1-201ENST00000260604 TROQ12816 1431 aaPredicted RBP11.81□□□□□ -0.52
PNPT1-201ENST00000260604 AFAP1Q8N556 730 aa11.81□□□□□ -0.52
PNPT1-201ENST00000260604 CCDC146Q8IYE0 955 aa11.8□□□□□ -0.52
PNPT1-201ENST00000260604 ARHGEF11O15085 1522 aa11.8□□□□□ -0.52
PNPT1-201ENST00000260604 KIAA0586Q9BVV6 1533 aa11.8□□□□□ -0.52
PNPT1-201ENST00000260604 SAFB2Q14151 953 aaKnown RBP eCLIP11.8□□□□□ -0.52
PNPT1-201ENST00000260604 CANXP27824 592 aaKnown RBP11.8□□□□□ -0.52
PNPT1-201ENST00000260604 NUP153P49790 1475 aaKnown RBP11.8□□□□□ -0.52
PNPT1-201ENST00000260604 RCAN3Q9UKA8 241 aa11.79□□□□□ -0.52
PNPT1-201ENST00000260604 NCOA1Q15788 1441 aa11.79□□□□□ -0.52
PNPT1-201ENST00000260604 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
PNPT1-201ENST00000260604 LAS1LQ9Y4W2 734 aaKnown RBP11.79□□□□□ -0.52
PNPT1-201ENST00000260604 KIF3BO15066 747 aa11.78□□□□□ -0.52
PNPT1-201ENST00000260604 TMF1P82094 1093 aa11.78□□□□□ -0.52
PNPT1-201ENST00000260604 IFT140Q96RY7 1462 aa11.78□□□□□ -0.52
PNPT1-201ENST00000260604 PNISRQ8TF01 805 aaKnown RBP11.78□□□□□ -0.52
PNPT1-201ENST00000260604 KIAA1107Q9UPP5 1409 aa11.77□□□□□ -0.52
PNPT1-201ENST00000260604 GRIN2AQ12879 1464 aa11.77□□□□□ -0.52
PNPT1-201ENST00000260604 CAMSAP2Q08AD1 1489 aa11.77□□□□□ -0.53
PNPT1-201ENST00000260604 GGT6Q6P531 493 aa11.77□□□□□ -0.53
PNPT1-201ENST00000260604 CCDC144AA2RUR9 1427 aa11.77□□□□□ -0.53
PNPT1-201ENST00000260604 C9orf84Q5VXU9 1444 aa11.77□□□□□ -0.53
PNPT1-201ENST00000260604 RPRD2Q5VT52 1461 aaKnown RBP11.76□□□□□ -0.53
PNPT1-201ENST00000260604 KTN1Q86UP2 1357 aaKnown RBP11.76□□□□□ -0.53
PNPT1-201ENST00000260604 RGS3P49796 1198 aa11.76□□□□□ -0.53
PNPT1-201ENST00000260604 NLRP13Q86W25 1043 aa11.75□□□□□ -0.53
PNPT1-201ENST00000260604 ABCA5Q8WWZ7 1642 aa11.75□□□□□ -0.53
PNPT1-201ENST00000260604 MYBBP1AQ9BQG0 1328 aaKnown RBP11.75□□□□□ -0.53
PNPT1-201ENST00000260604 EFCAB2Q5VUJ9 269 aa11.74□□□□□ -0.53
PNPT1-201ENST00000260604 GPATCH8Q9UKJ3 1502 aaKnown RBP11.74□□□□□ -0.53
PNPT1-201ENST00000260604 PLPPR3Q6T4P5 718 aa11.74□□□□□ -0.53
PNPT1-201ENST00000260604 RALBP1Q15311 655 aa11.74□□□□□ -0.53
PNPT1-201ENST00000260604 NOP58Q9Y2X3 529 aaKnown RBP11.73□□□□□ -0.53
PNPT1-201ENST00000260604 ROCK1Q13464 1354 aa11.73□□□□□ -0.53
PNPT1-201ENST00000260604 SAMD9Q5K651 1589 aa11.73□□□□□ -0.53
PNPT1-201ENST00000260604 DENND4BO75064 1496 aaPredicted RBP11.72□□□□□ -0.53
PNPT1-201ENST00000260604 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
PNPT1-201ENST00000260604 DISP1Q96F81 1524 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms