RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 CC2D1BQ5T0F9 858 aaKnown RBP16.22■□□□□ 0.19
USP30-201ENST00000257548 GLIPR1L2Q4G1C9 344 aa16.21■□□□□ 0.19
USP30-201ENST00000257548 MPHOSPH9Q99550 1183 aa16.21■□□□□ 0.19
USP30-201ENST00000257548 CARD11Q9BXL7 1154 aa16.21■□□□□ 0.19
USP30-201ENST00000257548 LRRC9Q6ZRR7 1453 aa16.2■□□□□ 0.18
USP30-201ENST00000257548 TOPBP1Q92547 1522 aa16.2■□□□□ 0.18
USP30-201ENST00000257548 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
USP30-201ENST00000257548 GZF1Q9H116 711 aaPredicted RBP16.19■□□□□ 0.18
USP30-201ENST00000257548 FRAT1Q92837 279 aaPredicted RBP16.18■□□□□ 0.18
USP30-201ENST00000257548 NFKBIBQ15653 356 aa16.17■□□□□ 0.18
USP30-201ENST00000257548 TIAM1Q13009 1591 aa16.14■□□□□ 0.17
USP30-201ENST00000257548 USP35Q9P2H5 1018 aa16.14■□□□□ 0.17
USP30-201ENST00000257548 KIF7Q2M1P5 1343 aa16.14■□□□□ 0.17
USP30-201ENST00000257548 RRP1P56182 461 aaKnown RBP16.14■□□□□ 0.17
USP30-201ENST00000257548 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
USP30-201ENST00000257548 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
USP30-201ENST00000257548 FHAD1B1AJZ9 1412 aa16.13■□□□□ 0.17
USP30-201ENST00000257548 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
USP30-201ENST00000257548 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
USP30-201ENST00000257548 MAPKBP1O60336 1514 aa16.11■□□□□ 0.17
USP30-201ENST00000257548 FRAT2O75474 233 aaPredicted RBP16.1■□□□□ 0.17
USP30-201ENST00000257548 WDR43Q15061 677 aaKnown RBP eCLIP16.1■□□□□ 0.17
USP30-201ENST00000257548 CCDC7Q96M83 1385 aa16.1■□□□□ 0.17
USP30-201ENST00000257548 CCDC18Q5T9S5 1454 aa16.1■□□□□ 0.17
USP30-201ENST00000257548 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
USP30-201ENST00000257548 UPF2Q9HAU5 1272 aaKnown RBP16.1■□□□□ 0.17
USP30-201ENST00000257548 VSIG10Q8N0Z9 540 aa16.09■□□□□ 0.17
USP30-201ENST00000257548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.09■□□□□ 0.17
USP30-201ENST00000257548 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.16
USP30-201ENST00000257548 NEUROD2Q15784 382 aa16.07■□□□□ 0.16
USP30-201ENST00000257548 GAPVD1Q14C86 1478 aa16.07■□□□□ 0.16
USP30-201ENST00000257548 PTPRKQ15262 1439 aa16.06■□□□□ 0.16
USP30-201ENST00000257548 CNTLNQ9NXG0 1405 aa16.06■□□□□ 0.16
USP30-201ENST00000257548 DCAF11Q8TEB1 546 aa16.06■□□□□ 0.16
USP30-201ENST00000257548 BACH2Q9BYV9 841 aa16.06■□□□□ 0.16
USP30-201ENST00000257548 ZNF644Q9H582 1327 aaPredicted RBP16.06■□□□□ 0.16
USP30-201ENST00000257548 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.06■□□□□ 0.16
USP30-201ENST00000257548 ABCA10Q8WWZ4 1543 aa16.05■□□□□ 0.16
USP30-201ENST00000257548 HSP90AA1P07900 732 aaKnown RBP16.05■□□□□ 0.16
USP30-201ENST00000257548 FMN1Q68DA7 1419 aa16.05■□□□□ 0.16
USP30-201ENST00000257548 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
USP30-201ENST00000257548 PDS5BQ9NTI5 1447 aa16.04■□□□□ 0.16
USP30-201ENST00000257548 ARID3AQ99856 593 aa16.04■□□□□ 0.16
USP30-201ENST00000257548 BECN1Q14457 450 aa16.03■□□□□ 0.16
USP30-201ENST00000257548 ST20-MTHFSA0A0A6YYL1 179 aa16.02■□□□□ 0.15
USP30-201ENST00000257548 PKD2Q13563 968 aa16.01■□□□□ 0.15
USP30-201ENST00000257548 PNNQ9H307 717 aaKnown RBP16.01■□□□□ 0.15
USP30-201ENST00000257548 FGD6Q6ZV73 1430 aa16■□□□□ 0.15
USP30-201ENST00000257548 TRIM44Q96DX7 344 aaPredicted RBP15.99■□□□□ 0.15
USP30-201ENST00000257548 CASKIN1Q8WXD9 1431 aa15.99■□□□□ 0.15
USP30-201ENST00000257548 UACAQ9BZF9 1416 aa15.97■□□□□ 0.15
USP30-201ENST00000257548 PNISRQ8TF01 805 aaKnown RBP15.97■□□□□ 0.15
USP30-201ENST00000257548 RSPH6AQ9H0K4 717 aa15.97■□□□□ 0.15
USP30-201ENST00000257548 NCOA2Q15596 1464 aa15.94■□□□□ 0.14
USP30-201ENST00000257548 MS4A1P11836 297 aa15.94■□□□□ 0.14
USP30-201ENST00000257548 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
USP30-201ENST00000257548 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
USP30-201ENST00000257548 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
USP30-201ENST00000257548 ZBTB7CA1YPR0 619 aa15.93■□□□□ 0.14
USP30-201ENST00000257548 CFDP1Q9UEE9 299 aaPredicted RBP15.93■□□□□ 0.14
USP30-201ENST00000257548 TNNT2P45379 298 aaPredicted RBP15.93■□□□□ 0.14
USP30-201ENST00000257548 CHMP7Q8WUX9 453 aaPredicted RBP15.93■□□□□ 0.14
USP30-201ENST00000257548 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
USP30-201ENST00000257548 USP47Q96K76 1375 aa15.92■□□□□ 0.14
USP30-201ENST00000257548 HSP90AA2PQ14568 343 aaPredicted RBP15.92■□□□□ 0.14
USP30-201ENST00000257548 NLRP13Q86W25 1043 aa15.92■□□□□ 0.14
USP30-201ENST00000257548 CDK13Q14004 1512 aaKnown RBP15.92■□□□□ 0.14
USP30-201ENST00000257548 C20orf194Q5TEA3 1177 aa15.91■□□□□ 0.14
USP30-201ENST00000257548 SMG6Q86US8 1419 aaKnown RBP15.91■□□□□ 0.14
USP30-201ENST00000257548 UBE2Q2Q8WVN8 375 aa15.91■□□□□ 0.14
USP30-201ENST00000257548 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
USP30-201ENST00000257548 POGKQ9P215 609 aa15.91■□□□□ 0.14
USP30-201ENST00000257548 ANP32BQ92688 251 aaKnown RBP15.9■□□□□ 0.14
USP30-201ENST00000257548 PKNOX2Q96KN3 472 aa15.9■□□□□ 0.14
USP30-201ENST00000257548 KNSTRNQ9Y448 316 aa15.9■□□□□ 0.14
USP30-201ENST00000257548 MYBBP1AQ9BQG0 1328 aaKnown RBP15.89■□□□□ 0.13
USP30-201ENST00000257548 SNAPC4Q5SXM2 1469 aa15.89■□□□□ 0.13
USP30-201ENST00000257548 CLUAP1Q96AJ1 413 aa15.89■□□□□ 0.13
USP30-201ENST00000257548 RALBP1Q15311 655 aa15.88■□□□□ 0.13
USP30-201ENST00000257548 PRDM2Q13029 1718 aa15.88■□□□□ 0.13
USP30-201ENST00000257548 L1TD1Q5T7N2 865 aaKnown RBP15.88■□□□□ 0.13
USP30-201ENST00000257548 NCLP19338 710 aaKnown RBP15.88■□□□□ 0.13
USP30-201ENST00000257548 KTN1Q86UP2 1357 aaKnown RBP15.87■□□□□ 0.13
USP30-201ENST00000257548 GOLGA6L3A6NEY3 463 aa15.87■□□□□ 0.13
USP30-201ENST00000257548 TSPY4P0CV99 314 aa15.87■□□□□ 0.13
USP30-201ENST00000257548 TSPY10P0CW01 314 aa15.87■□□□□ 0.13
USP30-201ENST00000257548 MYOM3Q5VTT5 1437 aa15.87■□□□□ 0.13
USP30-201ENST00000257548 NAIPQ13075 1403 aa15.86■□□□□ 0.13
USP30-201ENST00000257548 MAGI3Q5TCQ9 1506 aa15.85■□□□□ 0.13
USP30-201ENST00000257548 BCL2L13Q9BXK5 485 aa15.84■□□□□ 0.13
USP30-201ENST00000257548 KIF21AQ7Z4S6 1674 aa15.84■□□□□ 0.13
USP30-201ENST00000257548 TPRNQ4KMQ1 711 aa15.84■□□□□ 0.13
USP30-201ENST00000257548 CENPQQ7L2Z9 268 aaPredicted RBP15.84■□□□□ 0.13
USP30-201ENST00000257548 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
USP30-201ENST00000257548 PDE3BQ13370 1112 aa15.83■□□□□ 0.13
USP30-201ENST00000257548 MAP3K1Q13233 1512 aa15.82■□□□□ 0.12
USP30-201ENST00000257548 PANK3Q9H999 370 aa15.82■□□□□ 0.12
USP30-201ENST00000257548 COG6Q9Y2V7 657 aa15.82■□□□□ 0.12
USP30-201ENST00000257548 KIF15Q9NS87 1388 aa15.82■□□□□ 0.12
USP30-201ENST00000257548 MFAP1P55081 439 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms