RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 ZRSR1Q15695 479 aaKnown RBP21.96■■□□□ 1.11
SORT1-201ENST00000256637 WASHC2CQ9Y4E1 1318 aa21.93■■□□□ 1.1
SORT1-201ENST00000256637 CARMIL1Q5VZK9 1371 aa21.92■■□□□ 1.1
SORT1-201ENST00000256637 HDGFL2Q7Z4V5 671 aaPredicted RBP21.92■■□□□ 1.1
SORT1-201ENST00000256637 DCAF1Q9Y4B6 1507 aa21.91■■□□□ 1.1
SORT1-201ENST00000256637 RGS3P49796 1198 aa21.91■■□□□ 1.1
SORT1-201ENST00000256637 MIER1Q8N108 512 aa21.91■■□□□ 1.1
SORT1-201ENST00000256637 SOGA1O94964 1423 aa21.9■■□□□ 1.1
SORT1-201ENST00000256637 PLCB2Q00722 1185 aa21.9■■□□□ 1.1
SORT1-201ENST00000256637 PPP1R1BQ9UD71 204 aaPredicted RBP21.89■■□□□ 1.09
SORT1-201ENST00000256637 GTF2E1P29083 439 aaPredicted RBP21.88■■□□□ 1.09
SORT1-201ENST00000256637 TMF1P82094 1093 aa21.88■■□□□ 1.09
SORT1-201ENST00000256637 NGEFQ8N5V2 710 aa21.88■■□□□ 1.09
SORT1-201ENST00000256637 PRM3Q9NNZ6 103 aa21.88■■□□□ 1.09
SORT1-201ENST00000256637 TAF7LQ5H9L4 462 aa21.88■■□□□ 1.09
SORT1-201ENST00000256637 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
SORT1-201ENST00000256637 FBXW7Q969H0 707 aa21.87■■□□□ 1.09
SORT1-201ENST00000256637 CARMIL2Q6F5E8 1435 aa21.86■■□□□ 1.09
SORT1-201ENST00000256637 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
SORT1-201ENST00000256637 FAM69CQ0P6D2 419 aa21.86■■□□□ 1.09
SORT1-201ENST00000256637 ACIN1Q9UKV3 1341 aaKnown RBP21.86■■□□□ 1.09
SORT1-201ENST00000256637 SPRYD3Q8NCJ5 442 aa21.85■■□□□ 1.09
SORT1-201ENST00000256637 PKD2Q13563 968 aa21.84■■□□□ 1.09
SORT1-201ENST00000256637 PIP4K2BP78356 416 aa21.83■■□□□ 1.09
SORT1-201ENST00000256637 AMPHP49418 695 aa21.82■■□□□ 1.08
SORT1-201ENST00000256637 FRAT2O75474 233 aaPredicted RBP21.81■■□□□ 1.08
SORT1-201ENST00000256637 PDE4CQ08493 712 aa21.8■■□□□ 1.08
SORT1-201ENST00000256637 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
SORT1-201ENST00000256637 PRDM2Q13029 1718 aa21.78■■□□□ 1.08
SORT1-201ENST00000256637 RAD21O60216 631 aa21.78■■□□□ 1.08
SORT1-201ENST00000256637 GORABQ5T7V8 394 aa21.78■■□□□ 1.08
SORT1-201ENST00000256637 PNNQ9H307 717 aaKnown RBP21.77■■□□□ 1.08
SORT1-201ENST00000256637 EFCAB2Q5VUJ9 269 aa21.76■■□□□ 1.07
SORT1-201ENST00000256637 TRAK1Q9UPV9 953 aa21.75■■□□□ 1.07
SORT1-201ENST00000256637 NUTM2BA6NNL0 878 aaPredicted RBP21.75■■□□□ 1.07
SORT1-201ENST00000256637 NUTM2EB1AL46 878 aaPredicted RBP21.75■■□□□ 1.07
SORT1-201ENST00000256637 NUTM2AQ8IVF1 878 aaPredicted RBP21.75■■□□□ 1.07
SORT1-201ENST00000256637 SUPT16HQ9Y5B9 1047 aaKnown RBP21.75■■□□□ 1.07
SORT1-201ENST00000256637 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
SORT1-201ENST00000256637 VPS53Q5VIR6 699 aa21.74■■□□□ 1.07
SORT1-201ENST00000256637 GNL2Q13823 731 aaKnown RBP21.74■■□□□ 1.07
SORT1-201ENST00000256637 SLC4A10Q6U841 1118 aa21.73■■□□□ 1.07
SORT1-201ENST00000256637 U2AF1L5P0DN76 240 aaPredicted RBP21.72■■□□□ 1.07
SORT1-201ENST00000256637 U2AF1Q01081 240 aaKnown RBP eCLIP21.72■■□□□ 1.072e-7■■□□□ 13
SORT1-201ENST00000256637 ROCK2O75116 1388 aaKnown RBP21.72■■□□□ 1.07
SORT1-201ENST00000256637 B4GALNT3Q6L9W6 998 aa21.72■■□□□ 1.07
SORT1-201ENST00000256637 KRI1Q8N9T8 703 aaKnown RBP21.72■■□□□ 1.07
SORT1-201ENST00000256637 SPAG9O60271 1321 aaKnown RBP21.71■■□□□ 1.07
SORT1-201ENST00000256637 NUTM2GQ5VZR2 741 aa21.71■■□□□ 1.07
SORT1-201ENST00000256637 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
SORT1-201ENST00000256637 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
SORT1-201ENST00000256637 SAMD1Q6SPF0 538 aaPredicted RBP21.7■■□□□ 1.06
SORT1-201ENST00000256637 DCAF8L1A6NGE4 600 aa21.69■■□□□ 1.06
SORT1-201ENST00000256637 USP35Q9P2H5 1018 aa21.69■■□□□ 1.06
SORT1-201ENST00000256637 CCDC146Q8IYE0 955 aa21.69■■□□□ 1.06
SORT1-201ENST00000256637 PTMAP06454 111 aaKnown RBP21.69■■□□□ 1.06
SORT1-201ENST00000256637 HSP90AB1P08238 724 aaKnown RBP21.68■■□□□ 1.06
SORT1-201ENST00000256637 EEA1Q15075 1411 aa21.67■■□□□ 1.06
SORT1-201ENST00000256637 BECN1Q14457 450 aa21.67■■□□□ 1.06
SORT1-201ENST00000256637 NECTIN2Q92692 538 aa21.67■■□□□ 1.06
SORT1-201ENST00000256637 NUP155O75694 1391 aa21.66■■□□□ 1.06
SORT1-201ENST00000256637 WIZO95785 1651 aa21.65■■□□□ 1.06
SORT1-201ENST00000256637 JPH4Q96JJ6 628 aa21.64■■□□□ 1.06
SORT1-201ENST00000256637 PSME1Q06323 249 aa21.64■■□□□ 1.05
SORT1-201ENST00000256637 ARHGAP35Q9NRY4 1499 aa21.61■■□□□ 1.05
SORT1-201ENST00000256637 TOMM22Q9NS69 142 aa21.61■■□□□ 1.05
SORT1-201ENST00000256637 ERICH6BQ5W0A0 696 aa21.6■■□□□ 1.05
SORT1-201ENST00000256637 GOLGA6L22H0YM25 854 aa21.58■■□□□ 1.05
SORT1-201ENST00000256637 DNTTIP2Q5QJE6 756 aaKnown RBP21.58■■□□□ 1.05
SORT1-201ENST00000256637 ITPRIPQ8IWB1 547 aa21.58■■□□□ 1.05
SORT1-201ENST00000256637 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.05
SORT1-201ENST00000256637 ATF3P18847 181 aa21.58■■□□□ 1.04
SORT1-201ENST00000256637 MINK1Q8N4C8 1332 aaPredicted RBP21.58■■□□□ 1.04
SORT1-201ENST00000256637 WWC1Q8IX03 1113 aa21.57■■□□□ 1.04
SORT1-201ENST00000256637 KANK4Q5T7N3 995 aaPredicted RBP21.56■■□□□ 1.04
SORT1-201ENST00000256637 FHAD1B1AJZ9 1412 aa21.56■■□□□ 1.04
SORT1-201ENST00000256637 CWC22Q9HCG8 908 aaKnown RBP21.55■■□□□ 1.04
SORT1-201ENST00000256637 C1orf141Q5JVX7 400 aa21.55■■□□□ 1.04
SORT1-201ENST00000256637 ZNF428Q96B54 188 aa21.55■■□□□ 1.04
SORT1-201ENST00000256637 CREBRFQ8IUR6 639 aa21.54■■□□□ 1.04
SORT1-201ENST00000256637 NOL8Q76FK4 1167 aaKnown RBP21.54■■□□□ 1.04
SORT1-201ENST00000256637 HSP90B1P14625 803 aaKnown RBP21.53■■□□□ 1.04
SORT1-201ENST00000256637 RRP7AQ9Y3A4 280 aaKnown RBP21.53■■□□□ 1.04
SORT1-201ENST00000256637 TRIM6-TRIM34B2RNG4 842 aa21.52■■□□□ 1.04
SORT1-201ENST00000256637 FHOD3Q2V2M9 1422 aa21.52■■□□□ 1.04
SORT1-201ENST00000256637 HSPA5P11021 654 aaKnown RBP21.52■■□□□ 1.04
SORT1-201ENST00000256637 FAM177BA6PVY3 158 aa21.52■■□□□ 1.04
SORT1-201ENST00000256637 EIF2S2P20042 333 aaKnown RBP21.51■■□□□ 1.03
SORT1-201ENST00000256637 TRIM44Q96DX7 344 aaPredicted RBP21.51■■□□□ 1.03
SORT1-201ENST00000256637 ELL2O00472 640 aaPredicted RBP21.5■■□□□ 1.03
SORT1-201ENST00000256637 GOLGA6L4A6NEF3 574 aa21.49■■□□□ 1.03
SORT1-201ENST00000256637 STK31Q9BXU1 1019 aa21.49■■□□□ 1.03
SORT1-201ENST00000256637 STRN4Q9NRL3 753 aa21.49■■□□□ 1.03
SORT1-201ENST00000256637 TRIM34Q9BYJ4 488 aa21.48■■□□□ 1.03
SORT1-201ENST00000256637 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
SORT1-201ENST00000256637 SF3B2Q13435 895 aaKnown RBP21.48■■□□□ 1.03
SORT1-201ENST00000256637 MPHOSPH9Q99550 1183 aa21.47■■□□□ 1.03
SORT1-201ENST00000256637 KIAA1211Q6ZU35 1233 aa21.47■■□□□ 1.03
SORT1-201ENST00000256637 TERF2IPQ9NYB0 399 aa21.45■■□□□ 1.02
SORT1-201ENST00000256637 DDRGK1Q96HY6 314 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms