RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 NBPF8Q3BBV2 869 aa15.82■□□□□ 0.12
VRTN-201ENST00000256362 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
VRTN-201ENST00000256362 EFCAB5A4FU69 1503 aa15.82■□□□□ 0.12
VRTN-201ENST00000256362 MYT1LQ9UL68 1186 aa15.81■□□□□ 0.12
VRTN-201ENST00000256362 ABCA5Q8WWZ7 1642 aa15.8■□□□□ 0.12
VRTN-201ENST00000256362 KIF21AQ7Z4S6 1674 aa15.8■□□□□ 0.12
VRTN-201ENST00000256362 PRKRIP1Q9H875 184 aaPredicted RBP15.79■□□□□ 0.12
VRTN-201ENST00000256362 GAPVD1Q14C86 1478 aa15.78■□□□□ 0.12
VRTN-201ENST00000256362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.78■□□□□ 0.12
VRTN-201ENST00000256362 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
VRTN-201ENST00000256362 NEFMP07197 916 aa15.78■□□□□ 0.12
VRTN-201ENST00000256362 CDK13Q14004 1512 aaKnown RBP15.76■□□□□ 0.11
VRTN-201ENST00000256362 KDM6BO15054 1643 aa15.76■□□□□ 0.11
VRTN-201ENST00000256362 MAGI3Q5TCQ9 1506 aa15.76■□□□□ 0.11
VRTN-201ENST00000256362 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
VRTN-201ENST00000256362 ARXQ96QS3 562 aa15.74■□□□□ 0.11
VRTN-201ENST00000256362 LRRIQ1Q96JM4 1722 aa15.73■□□□□ 0.11
VRTN-201ENST00000256362 CCDC7Q96M83 1385 aa15.73■□□□□ 0.11
VRTN-201ENST00000256362 GRIN2BQ13224 1484 aa15.72■□□□□ 0.11
VRTN-201ENST00000256362 FBLN2P98095 1184 aa15.72■□□□□ 0.11
VRTN-201ENST00000256362 KIF7Q2M1P5 1343 aa15.72■□□□□ 0.11
VRTN-201ENST00000256362 KDM5BQ9UGL1 1544 aa15.72■□□□□ 0.11
VRTN-201ENST00000256362 CNTLNQ9NXG0 1405 aa15.72■□□□□ 0.11
VRTN-201ENST00000256362 KDM2AQ9Y2K7 1162 aa15.71■□□□□ 0.11
VRTN-201ENST00000256362 SUPT6HQ7KZ85 1726 aaKnown RBP15.71■□□□□ 0.11
VRTN-201ENST00000256362 TARBP1Q13395 1621 aaKnown RBP15.71■□□□□ 0.1
VRTN-201ENST00000256362 DENND4BO75064 1496 aaPredicted RBP15.71■□□□□ 0.1
VRTN-201ENST00000256362 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
VRTN-201ENST00000256362 EHBP1L1Q8N3D4 1523 aa15.68■□□□□ 0.1
VRTN-201ENST00000256362 IPO9Q96P70 1041 aaKnown RBP15.66■□□□□ 0.1
VRTN-201ENST00000256362 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
VRTN-201ENST00000256362 UGGT2Q9NYU1 1516 aa15.66■□□□□ 0.1
VRTN-201ENST00000256362 EPRSP07814 1512 aaKnown RBP15.64■□□□□ 0.09
VRTN-201ENST00000256362 CFDP1Q9UEE9 299 aaPredicted RBP15.63■□□□□ 0.09
VRTN-201ENST00000256362 THOC2Q8NI27 1593 aaKnown RBP15.63■□□□□ 0.09
VRTN-201ENST00000256362 SLC4A3P48751 1232 aa15.63■□□□□ 0.09
VRTN-201ENST00000256362 PKD2Q13563 968 aa15.63■□□□□ 0.09
VRTN-201ENST00000256362 PBRM1Q86U86 1689 aa15.62■□□□□ 0.09
VRTN-201ENST00000256362 ZBED9Q6R2W3 1325 aa15.62■□□□□ 0.09
VRTN-201ENST00000256362 TMC1Q8TDI8 760 aa15.61■□□□□ 0.09
VRTN-201ENST00000256362 NCOA1Q15788 1441 aa15.61■□□□□ 0.09
VRTN-201ENST00000256362 BRPF3Q9ULD4 1205 aa15.6■□□□□ 0.09
VRTN-201ENST00000256362 ANKRD30BQ9BXX2 1392 aa15.6■□□□□ 0.09
VRTN-201ENST00000256362 DAPK1P53355 1430 aa15.57■□□□□ 0.08
VRTN-201ENST00000256362 CARD11Q9BXL7 1154 aa15.56■□□□□ 0.08
VRTN-201ENST00000256362 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
VRTN-201ENST00000256362 SKAP1Q86WV1 359 aa15.56■□□□□ 0.08
VRTN-201ENST00000256362 ABCC5O15440 1437 aa15.56■□□□□ 0.08
VRTN-201ENST00000256362 USP47Q96K76 1375 aa15.56■□□□□ 0.08
VRTN-201ENST00000256362 ADAMTS12P58397 1594 aa15.55■□□□□ 0.08
VRTN-201ENST00000256362 RGL3Q3MIN7 710 aa15.55■□□□□ 0.08
VRTN-201ENST00000256362 PRG4Q92954 1404 aaPredicted RBP15.54■□□□□ 0.08
VRTN-201ENST00000256362 HECW1Q76N89 1606 aa15.53■□□□□ 0.08
VRTN-201ENST00000256362 RPRD2Q5VT52 1461 aaKnown RBP15.53■□□□□ 0.08
VRTN-201ENST00000256362 DCAF11Q8TEB1 546 aa15.53■□□□□ 0.08
VRTN-201ENST00000256362 TCOF1Q13428 1488 aaKnown RBP15.52■□□□□ 0.08
VRTN-201ENST00000256362 ST20-MTHFSA0A0A6YYL1 179 aa15.52■□□□□ 0.08
VRTN-201ENST00000256362 NUDCQ9Y266 331 aa15.52■□□□□ 0.07
VRTN-201ENST00000256362 IQGAP2Q13576 1575 aa15.52■□□□□ 0.07
VRTN-201ENST00000256362 ARHGEF11O15085 1522 aa15.51■□□□□ 0.07
VRTN-201ENST00000256362 ZNF608Q9ULD9 1512 aaPredicted RBP15.5■□□□□ 0.07
VRTN-201ENST00000256362 MIA2Q96PC5 1412 aa15.5■□□□□ 0.07
VRTN-201ENST00000256362 TEX14Q8IWB6 1497 aa15.5■□□□□ 0.07
VRTN-201ENST00000256362 GCC2Q8IWJ2 1684 aa15.49■□□□□ 0.07
VRTN-201ENST00000256362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.07
VRTN-201ENST00000256362 CHMP7Q8WUX9 453 aaPredicted RBP15.49■□□□□ 0.07
VRTN-201ENST00000256362 NUP155O75694 1391 aa15.48■□□□□ 0.07
VRTN-201ENST00000256362 ERICH6BQ5W0A0 696 aa15.48■□□□□ 0.07
VRTN-201ENST00000256362 EXOC6Q8TAG9 804 aa15.47■□□□□ 0.07
VRTN-201ENST00000256362 HNRNPMP52272 730 aaKnown RBP eCLIP15.46■□□□□ 0.07
VRTN-201ENST00000256362 WDR62O43379 1518 aa15.46■□□□□ 0.07
VRTN-201ENST00000256362 SPATA31E1Q6ZUB1 1445 aa15.46■□□□□ 0.07
VRTN-201ENST00000256362 DHX29Q7Z478 1369 aaKnown RBP15.46■□□□□ 0.06
VRTN-201ENST00000256362 CC2D1BQ5T0F9 858 aaKnown RBP15.45■□□□□ 0.06
VRTN-201ENST00000256362 PNISRQ8TF01 805 aaKnown RBP15.45■□□□□ 0.06
VRTN-201ENST00000256362 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
VRTN-201ENST00000256362 PLIN1O60240 522 aa15.44■□□□□ 0.06
VRTN-201ENST00000256362 PLB1Q6P1J6 1458 aa15.43■□□□□ 0.06
VRTN-201ENST00000256362 NUP153P49790 1475 aaKnown RBP15.43■□□□□ 0.06
VRTN-201ENST00000256362 PDE4AP27815 886 aa15.43■□□□□ 0.06
VRTN-201ENST00000256362 CDCA7LQ96GN5 454 aa15.42■□□□□ 0.06
VRTN-201ENST00000256362 PZPP20742 1482 aa15.42■□□□□ 0.06
VRTN-201ENST00000256362 ARID4BQ4LE39 1312 aaPredicted RBP15.41■□□□□ 0.06
VRTN-201ENST00000256362 TSPY4P0CV99 314 aa15.41■□□□□ 0.06
VRTN-201ENST00000256362 TSPY10P0CW01 314 aa15.41■□□□□ 0.06
VRTN-201ENST00000256362 ROCK1Q13464 1354 aa15.41■□□□□ 0.06
VRTN-201ENST00000256362 RGS3P49796 1198 aa15.41■□□□□ 0.06
VRTN-201ENST00000256362 SMG6Q86US8 1419 aaKnown RBP15.4■□□□□ 0.06
VRTN-201ENST00000256362 CAMSAP2Q08AD1 1489 aa15.4■□□□□ 0.06
VRTN-201ENST00000256362 PPM1GO15355 546 aaPredicted RBP15.4■□□□□ 0.06
VRTN-201ENST00000256362 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
VRTN-201ENST00000256362 KIAA1107Q9UPP5 1409 aa15.39■□□□□ 0.05
VRTN-201ENST00000256362 NBPF1Q3BBV0 1214 aa15.39■□□□□ 0.05
VRTN-201ENST00000256362 EIF4G3O43432 1585 aaKnown RBP15.39■□□□□ 0.05
VRTN-201ENST00000256362 BCORL1Q5H9F3 1711 aa15.38■□□□□ 0.05
VRTN-201ENST00000256362 ANKRD50Q9ULJ7 1429 aa15.38■□□□□ 0.05
VRTN-201ENST00000256362 ANKRD30AQ9BXX3 1397 aa15.38■□□□□ 0.05
VRTN-201ENST00000256362 DISP1Q96F81 1524 aa15.38■□□□□ 0.05
VRTN-201ENST00000256362 ROCK2O75116 1388 aaKnown RBP15.37■□□□□ 0.05
VRTN-201ENST00000256362 KIAA0556O60303 1618 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms