RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 ADGBQ8N7X0 1667 aa21.69■■□□□ 1.06
DDX49-201ENST00000247003 TRIM52Q96A61 297 aa21.69■■□□□ 1.06
DDX49-201ENST00000247003 GPATCH8Q9UKJ3 1502 aaKnown RBP21.68■■□□□ 1.06
DDX49-201ENST00000247003 KDM6BO15054 1643 aa21.68■■□□□ 1.06
DDX49-201ENST00000247003 PLEKHD1A6NEE1 506 aa21.68■■□□□ 1.06
DDX49-201ENST00000247003 PTPRGP23470 1445 aa21.67■■□□□ 1.06
DDX49-201ENST00000247003 CROCC2H7BZ55 1655 aa21.66■■□□□ 1.06
DDX49-201ENST00000247003 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
DDX49-201ENST00000247003 PPP1R15AO75807 674 aaPredicted RBP21.66■■□□□ 1.06
DDX49-201ENST00000247003 ATP10BO94823 1461 aa21.66■■□□□ 1.06
DDX49-201ENST00000247003 ZNF644Q9H582 1327 aaPredicted RBP21.63■■□□□ 1.05
DDX49-201ENST00000247003 CDC42BPAQ5VT25 1732 aa21.63■■□□□ 1.05
DDX49-201ENST00000247003 SCAF1Q9H7N4 1312 aaKnown RBP21.62■■□□□ 1.05
DDX49-201ENST00000247003 YTHDC1Q96MU7 727 aaKnown RBP21.62■■□□□ 1.05
DDX49-201ENST00000247003 ZNF777Q9ULD5 760 aaPredicted RBP21.59■■□□□ 1.05
DDX49-201ENST00000247003 ABCC10Q5T3U5 1492 aa21.58■■□□□ 1.05
DDX49-201ENST00000247003 MPHOSPH9Q99550 1183 aa21.57■■□□□ 1.04
DDX49-201ENST00000247003 ADGRL2O95490 1459 aa21.57■■□□□ 1.04
DDX49-201ENST00000247003 DENND4BO75064 1496 aaPredicted RBP21.56■■□□□ 1.04
DDX49-201ENST00000247003 CLASP1Q7Z460 1538 aa21.54■■□□□ 1.04
DDX49-201ENST00000247003 SHANK2Q9UPX8 1470 aa21.54■■□□□ 1.04
DDX49-201ENST00000247003 ANKRD30AQ9BXX3 1397 aa21.53■■□□□ 1.04
DDX49-201ENST00000247003 NCOA1Q15788 1441 aa21.53■■□□□ 1.04
DDX49-201ENST00000247003 PREX2Q70Z35 1606 aa21.5■■□□□ 1.03
DDX49-201ENST00000247003 ABCC2Q92887 1545 aa21.49■■□□□ 1.03
DDX49-201ENST00000247003 KDM5BQ9UGL1 1544 aa21.48■■□□□ 1.03
DDX49-201ENST00000247003 ARHGEF5Q12774 1597 aa21.47■■□□□ 1.03
DDX49-201ENST00000247003 SLC4A1APQ9BWU0 796 aaKnown RBP21.47■■□□□ 1.03
DDX49-201ENST00000247003 C9orf84Q5VXU9 1444 aa21.46■■□□□ 1.03
DDX49-201ENST00000247003 OSCARQ8IYS5 282 aa21.45■■□□□ 1.02
DDX49-201ENST00000247003 ERCC6L2Q5T890 1561 aa21.43■■□□□ 1.02
DDX49-201ENST00000247003 RPRD2Q5VT52 1461 aaKnown RBP21.43■■□□□ 1.02
DDX49-201ENST00000247003 CDC42BPBQ9Y5S2 1711 aa21.43■■□□□ 1.02
DDX49-201ENST00000247003 ANKRD30BQ9BXX2 1392 aa21.42■■□□□ 1.02
DDX49-201ENST00000247003 ANKRD50Q9ULJ7 1429 aa21.42■■□□□ 1.02
DDX49-201ENST00000247003 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
DDX49-201ENST00000247003 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
DDX49-201ENST00000247003 PZPP20742 1482 aa21.41■■□□□ 1.02
DDX49-201ENST00000247003 GTF3C3Q9Y5Q9 886 aa21.41■■□□□ 1.02
DDX49-201ENST00000247003 SAMD9LQ8IVG5 1584 aa21.41■■□□□ 1.02
DDX49-201ENST00000247003 DDX10Q13206 875 aaKnown RBP21.41■■□□□ 1.02
DDX49-201ENST00000247003 FOXD1Q16676 465 aa21.4■■□□□ 1.02
DDX49-201ENST00000247003 DNAJC5Q9H3Z4 198 aa21.4■■□□□ 1.02
DDX49-201ENST00000247003 CCDC141Q6ZP82 1450 aa21.4■■□□□ 1.02
DDX49-201ENST00000247003 MYO5CQ9NQX4 1742 aa21.39■■□□□ 1.02
DDX49-201ENST00000247003 TTC37Q6PGP7 1564 aa21.38■■□□□ 1.01
DDX49-201ENST00000247003 ARHGAP5Q13017 1502 aa21.38■■□□□ 1.01
DDX49-201ENST00000247003 HIRIP3Q9BW71 556 aaPredicted RBP21.36■■□□□ 1.01
DDX49-201ENST00000247003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.36■■□□□ 1.01
DDX49-201ENST00000247003 KIAA1107Q9UPP5 1409 aa21.36■■□□□ 1.01
DDX49-201ENST00000247003 RSPH4AQ5TD94 716 aa21.36■■□□□ 1.01
DDX49-201ENST00000247003 ZCCHC11Q5TAX3 1644 aaKnown RBP21.35■■□□□ 1.01
DDX49-201ENST00000247003 UHRF1BP1LA0JNW5 1464 aa21.35■■□□□ 1.01
DDX49-201ENST00000247003 MBD5Q9P267 1494 aa21.35■■□□□ 1.01
DDX49-201ENST00000247003 TEX14Q8IWB6 1497 aa21.34■■□□□ 1.01
DDX49-201ENST00000247003 L3MBTL2Q969R5 705 aa21.34■■□□□ 1.01
DDX49-201ENST00000247003 KIF15Q9NS87 1388 aa21.33■■□□□ 1.01
DDX49-201ENST00000247003 PLEKHH2Q8IVE3 1493 aa21.33■■□□□ 1.01
DDX49-201ENST00000247003 KDM5DQ9BY66 1539 aa21.33■■□□□ 1
DDX49-201ENST00000247003 HNRNPMP52272 730 aaKnown RBP eCLIP21.32■■□□□ 1
DDX49-201ENST00000247003 SYCP2Q9BX26 1530 aa21.32■■□□□ 1
DDX49-201ENST00000247003 MAST1Q9Y2H9 1570 aa21.3■■□□□ 1
DDX49-201ENST00000247003 EIF4G2P78344 907 aaKnown RBP eCLIP21.29■■□□□ 1
DDX49-201ENST00000247003 ANP32CO43423 234 aa21.29■■□□□ 1
DDX49-201ENST00000247003 NUP155O75694 1391 aa21.28■■□□□ 1
DDX49-201ENST00000247003 PKD2Q13563 968 aa21.27■■□□□ 1
DDX49-201ENST00000247003 HSPA5P11021 654 aaKnown RBP21.25■□□□□ 0.99
DDX49-201ENST00000247003 PLXNC1O60486 1568 aa21.24■□□□□ 0.99
DDX49-201ENST00000247003 KCNH8Q96L42 1107 aa21.22■□□□□ 0.99
DDX49-201ENST00000247003 CCER2I3L3R5 266 aa21.2■□□□□ 0.98
DDX49-201ENST00000247003 PLCH2O75038 1416 aa21.2■□□□□ 0.98
DDX49-201ENST00000247003 UNC13BO14795 1591 aa21.18■□□□□ 0.98
DDX49-201ENST00000247003 FAM135AQ9P2D6 1515 aa21.17■□□□□ 0.98
DDX49-201ENST00000247003 ABCC1P33527 1531 aa21.16■□□□□ 0.98
DDX49-201ENST00000247003 EFCAB2Q5VUJ9 269 aa21.16■□□□□ 0.98
DDX49-201ENST00000247003 ARHGEF12Q9NZN5 1544 aa21.16■□□□□ 0.98
DDX49-201ENST00000247003 POLR1AO95602 1720 aaPredicted RBP21.16■□□□□ 0.98
DDX49-201ENST00000247003 NBPF8Q3BBV2 869 aa21.15■□□□□ 0.98
DDX49-201ENST00000247003 ARAP3Q8WWN8 1544 aa21.15■□□□□ 0.98
DDX49-201ENST00000247003 DUOX2Q9NRD8 1548 aa21.15■□□□□ 0.98
DDX49-201ENST00000247003 WASHC2AQ641Q2 1341 aa21.14■□□□□ 0.97
DDX49-201ENST00000247003 WDR7Q9Y4E6 1490 aa21.12■□□□□ 0.97
DDX49-201ENST00000247003 ERBINQ96RT1 1412 aa21.11■□□□□ 0.97
DDX49-201ENST00000247003 CNTLNQ9NXG0 1405 aa21.1■□□□□ 0.97
DDX49-201ENST00000247003 IQGAP3Q86VI3 1631 aa21.1■□□□□ 0.97
DDX49-201ENST00000247003 CCDC7Q96M83 1385 aa21.08■□□□□ 0.97
DDX49-201ENST00000247003 UHRF1BP1Q6BDS2 1440 aa21.08■□□□□ 0.96
DDX49-201ENST00000247003 SPATA31E1Q6ZUB1 1445 aa21.07■□□□□ 0.96
DDX49-201ENST00000247003 ZNF326Q5BKZ1 582 aaKnown RBP21.07■□□□□ 0.96
DDX49-201ENST00000247003 RALGAPBQ86X10 1494 aa21.06■□□□□ 0.96
DDX49-201ENST00000247003 CCDC144AA2RUR9 1427 aa21.05■□□□□ 0.96
DDX49-201ENST00000247003 RIMBP3CA6NJZ7 1639 aa21.04■□□□□ 0.96
DDX49-201ENST00000247003 RIMBP3BA6NNM3 1639 aa21.04■□□□□ 0.96
DDX49-201ENST00000247003 RIMBP3Q9UFD9 1639 aa21.04■□□□□ 0.96
DDX49-201ENST00000247003 MAGI2Q86UL8 1455 aa21.04■□□□□ 0.96
DDX49-201ENST00000247003 ABCA9Q8IUA7 1624 aa21.04■□□□□ 0.96
DDX49-201ENST00000247003 USP47Q96K76 1375 aa21.03■□□□□ 0.96
DDX49-201ENST00000247003 KDM5CP41229 1560 aa21.02■□□□□ 0.96
DDX49-201ENST00000247003 RTEL1-TNFRSF6BF6WH68 1400 aa21.02■□□□□ 0.95
DDX49-201ENST00000247003 TRAPPC8Q9Y2L5 1435 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms