RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 NESP48681 1621 aa9.71□□□□□ -0.85
NEUROD4-201ENST00000242994 WASHC2AQ641Q2 1341 aa9.71□□□□□ -0.86
NEUROD4-201ENST00000242994 ANKRD30AQ9BXX3 1397 aa9.71□□□□□ -0.86
NEUROD4-201ENST00000242994 RCAN3Q9UKA8 241 aa9.7□□□□□ -0.86
NEUROD4-201ENST00000242994 TOP2BQ02880 1626 aa9.69□□□□□ -0.86
NEUROD4-201ENST00000242994 NUDCQ9Y266 331 aa9.69□□□□□ -0.86
NEUROD4-201ENST00000242994 CFTRP13569 1480 aa9.69□□□□□ -0.86
NEUROD4-201ENST00000242994 GAPVD1Q14C86 1478 aa9.69□□□□□ -0.86
NEUROD4-201ENST00000242994 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
NEUROD4-201ENST00000242994 ERICH3Q5RHP9 1530 aa9.69□□□□□ -0.86
NEUROD4-201ENST00000242994 GGT6Q6P531 493 aa9.69□□□□□ -0.86
NEUROD4-201ENST00000242994 PLIN1O60240 522 aa9.68□□□□□ -0.86
NEUROD4-201ENST00000242994 CCDC184Q52MB2 194 aa9.68□□□□□ -0.86
NEUROD4-201ENST00000242994 AQRO60306 1485 aaKnown RBP eCLIP9.68□□□□□ -0.86
NEUROD4-201ENST00000242994 KTN1Q86UP2 1357 aaKnown RBP9.68□□□□□ -0.86
NEUROD4-201ENST00000242994 MYOM3Q5VTT5 1437 aa9.68□□□□□ -0.86
NEUROD4-201ENST00000242994 U2SURPO15042 1029 aaKnown RBP9.68□□□□□ -0.86
NEUROD4-201ENST00000242994 CARMIL2Q6F5E8 1435 aa9.67□□□□□ -0.86
NEUROD4-201ENST00000242994 DNAJC5BQ9UF47 199 aa9.67□□□□□ -0.86
NEUROD4-201ENST00000242994 CCDC146Q8IYE0 955 aa9.67□□□□□ -0.86
NEUROD4-201ENST00000242994 WDR97A6NE52 1622 aa9.67□□□□□ -0.86
NEUROD4-201ENST00000242994 UACAQ9BZF9 1416 aa9.67□□□□□ -0.86
NEUROD4-201ENST00000242994 KIF7Q2M1P5 1343 aa9.67□□□□□ -0.86
NEUROD4-201ENST00000242994 USP47Q96K76 1375 aa9.67□□□□□ -0.86
NEUROD4-201ENST00000242994 DEKP35659 375 aaKnown RBP9.66□□□□□ -0.86
NEUROD4-201ENST00000242994 NCOA2Q15596 1464 aa9.66□□□□□ -0.86
NEUROD4-201ENST00000242994 NUTM2DQ5VT03 806 aaPredicted RBP9.66□□□□□ -0.86
NEUROD4-201ENST00000242994 BICRAQ9NZM4 1560 aa9.66□□□□□ -0.86
NEUROD4-201ENST00000242994 FTSJ3Q8IY81 847 aaKnown RBP9.65□□□□□ -0.86
NEUROD4-201ENST00000242994 CFAP53Q96M91 514 aa9.65□□□□□ -0.87
NEUROD4-201ENST00000242994 STK26Q9P289 416 aa9.65□□□□□ -0.87
NEUROD4-201ENST00000242994 NBPF8Q3BBV2 869 aa9.64□□□□□ -0.87
NEUROD4-201ENST00000242994 NLRP13Q86W25 1043 aa9.64□□□□□ -0.87
NEUROD4-201ENST00000242994 CASKIN1Q8WXD9 1431 aa9.64□□□□□ -0.87
NEUROD4-201ENST00000242994 KIF3BO15066 747 aa9.64□□□□□ -0.87
NEUROD4-201ENST00000242994 DDRGK1Q96HY6 314 aa9.63□□□□□ -0.87
NEUROD4-201ENST00000242994 PANK3Q9H999 370 aa9.63□□□□□ -0.87
NEUROD4-201ENST00000242994 CCDC7Q96M83 1385 aa9.63□□□□□ -0.87
NEUROD4-201ENST00000242994 RALBP1Q15311 655 aa9.63□□□□□ -0.87
NEUROD4-201ENST00000242994 EXOC6Q8TAG9 804 aa9.63□□□□□ -0.87
NEUROD4-201ENST00000242994 ZBED9Q6R2W3 1325 aa9.63□□□□□ -0.87
NEUROD4-201ENST00000242994 SPRYD3Q8NCJ5 442 aa9.62□□□□□ -0.87
NEUROD4-201ENST00000242994 POGKQ9P215 609 aa9.62□□□□□ -0.87
NEUROD4-201ENST00000242994 SOX12O15370 315 aa9.62□□□□□ -0.87
NEUROD4-201ENST00000242994 TIAM1Q13009 1591 aa9.62□□□□□ -0.87
NEUROD4-201ENST00000242994 MLECQ14165 292 aa9.62□□□□□ -0.87
NEUROD4-201ENST00000242994 MORC1Q86VD1 984 aa9.62□□□□□ -0.87
NEUROD4-201ENST00000242994 ZBTB7CA1YPR0 619 aa9.61□□□□□ -0.87
NEUROD4-201ENST00000242994 SRPK2P78362 688 aaKnown RBP9.61□□□□□ -0.87
NEUROD4-201ENST00000242994 CLUAP1Q96AJ1 413 aa9.61□□□□□ -0.87
NEUROD4-201ENST00000242994 EFCAB2Q5VUJ9 269 aa9.61□□□□□ -0.87
NEUROD4-201ENST00000242994 MAPK8IP3Q9UPT6 1336 aa9.61□□□□□ -0.87
NEUROD4-201ENST00000242994 POLA1P09884 1462 aaPredicted RBP9.6□□□□□ -0.87
NEUROD4-201ENST00000242994 ERICH6BQ5W0A0 696 aa9.6□□□□□ -0.87
NEUROD4-201ENST00000242994 C14orf37Q86TY3 774 aa9.6□□□□□ -0.87
NEUROD4-201ENST00000242994 RRP7AQ9Y3A4 280 aaKnown RBP9.59□□□□□ -0.87
NEUROD4-201ENST00000242994 SLC4A3P48751 1232 aa9.59□□□□□ -0.87
NEUROD4-201ENST00000242994 MYBBP1AQ9BQG0 1328 aaKnown RBP9.59□□□□□ -0.87
NEUROD4-201ENST00000242994 CCDC144AA2RUR9 1427 aa9.59□□□□□ -0.87
NEUROD4-201ENST00000242994 FYCO1Q9BQS8 1478 aa9.58□□□□□ -0.88
NEUROD4-201ENST00000242994 BECN1Q14457 450 aa9.58□□□□□ -0.88
NEUROD4-201ENST00000242994 BCL2L13Q9BXK5 485 aa9.58□□□□□ -0.88
NEUROD4-201ENST00000242994 C11orf95C9JLR9 678 aaPredicted RBP9.58□□□□□ -0.88
NEUROD4-201ENST00000242994 TRAK1Q9UPV9 953 aa9.58□□□□□ -0.88
NEUROD4-201ENST00000242994 U2AF1L5P0DN76 240 aaPredicted RBP9.58□□□□□ -0.88
NEUROD4-201ENST00000242994 U2AF1Q01081 240 aaKnown RBP eCLIP9.58□□□□□ -0.88
NEUROD4-201ENST00000242994 KIF15Q9NS87 1388 aa9.58□□□□□ -0.88
NEUROD4-201ENST00000242994 CNTLNQ9NXG0 1405 aa9.58□□□□□ -0.88
NEUROD4-201ENST00000242994 SLKQ9H2G2 1235 aaPredicted RBP9.57□□□□□ -0.88
NEUROD4-201ENST00000242994 TOPBP1Q92547 1522 aa9.57□□□□□ -0.88
NEUROD4-201ENST00000242994 PRDM2Q13029 1718 aa9.57□□□□□ -0.88
NEUROD4-201ENST00000242994 SPAG9O60271 1321 aaKnown RBP9.57□□□□□ -0.88
NEUROD4-201ENST00000242994 IPO9Q96P70 1041 aaKnown RBP9.57□□□□□ -0.88
NEUROD4-201ENST00000242994 MYH16Q9H6N6 1097 aa9.57□□□□□ -0.88
NEUROD4-201ENST00000242994 TPRNQ4KMQ1 711 aa9.56□□□□□ -0.88
NEUROD4-201ENST00000242994 KANK1Q14678 1352 aa9.56□□□□□ -0.88
NEUROD4-201ENST00000242994 RRP1P56182 461 aaKnown RBP9.56□□□□□ -0.88
NEUROD4-201ENST00000242994 GOLGA2Q08379 1002 aa9.56□□□□□ -0.88
NEUROD4-201ENST00000242994 CDCA7LQ96GN5 454 aa9.56□□□□□ -0.88
NEUROD4-201ENST00000242994 HFM1A2PYH4 1435 aa9.56□□□□□ -0.88
NEUROD4-201ENST00000242994 ARID4BQ4LE39 1312 aaPredicted RBP9.56□□□□□ -0.88
NEUROD4-201ENST00000242994 NBPF1Q3BBV0 1214 aa9.56□□□□□ -0.88
NEUROD4-201ENST00000242994 NAIPQ13075 1403 aa9.55□□□□□ -0.88
NEUROD4-201ENST00000242994 PCF11O94913 1555 aaKnown RBP9.55□□□□□ -0.88
NEUROD4-201ENST00000242994 UNC13AQ9UPW8 1703 aa9.55□□□□□ -0.88
NEUROD4-201ENST00000242994 CRBNQ96SW2 442 aa9.55□□□□□ -0.88
NEUROD4-201ENST00000242994 PTPRGP23470 1445 aa9.55□□□□□ -0.88
NEUROD4-201ENST00000242994 TCERG1O14776 1098 aaKnown RBP9.55□□□□□ -0.88
NEUROD4-201ENST00000242994 ANKRD50Q9ULJ7 1429 aa9.55□□□□□ -0.88
NEUROD4-201ENST00000242994 AKNAQ7Z591 1439 aa9.54□□□□□ -0.88
NEUROD4-201ENST00000242994 ANP32BQ92688 251 aaKnown RBP9.54□□□□□ -0.88
NEUROD4-201ENST00000242994 HMGXB3Q12766 1538 aa9.54□□□□□ -0.88
NEUROD4-201ENST00000242994 APAF1O14727 1248 aa9.54□□□□□ -0.88
NEUROD4-201ENST00000242994 PRG4Q92954 1404 aaPredicted RBP9.53□□□□□ -0.88
NEUROD4-201ENST00000242994 CDK13Q14004 1512 aaKnown RBP9.53□□□□□ -0.88
NEUROD4-201ENST00000242994 APBB1O00213 710 aa9.53□□□□□ -0.88
NEUROD4-201ENST00000242994 PDE4AP27815 886 aa9.53□□□□□ -0.88
NEUROD4-201ENST00000242994 CC2D2AQ9P2K1 1620 aa9.53□□□□□ -0.88
NEUROD4-201ENST00000242994 NCLP19338 710 aaKnown RBP9.51□□□□□ -0.89
NEUROD4-201ENST00000242994 PDE3BQ13370 1112 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms