RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 TARBP1Q13395 1621 aaKnown RBP15.33■□□□□ 0.05
TTC1-201ENST00000231238 ABCA5Q8WWZ7 1642 aa15.3■□□□□ 0.04
TTC1-201ENST00000231238 BMP2KQ9NSY1 1161 aaPredicted RBP15.3■□□□□ 0.04
TTC1-201ENST00000231238 CUL7Q14999 1698 aa15.3■□□□□ 0.04
TTC1-201ENST00000231238 ATMINO43313 823 aaPredicted RBP15.29■□□□□ 0.04
TTC1-201ENST00000231238 ASTLQ6HA08 431 aaPredicted RBP15.29■□□□□ 0.04
TTC1-201ENST00000231238 CLIP1P30622 1438 aa15.28■□□□□ 0.04
TTC1-201ENST00000231238 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.04
TTC1-201ENST00000231238 TIE1P35590 1138 aa15.27■□□□□ 0.04
TTC1-201ENST00000231238 ZNF467Q7Z7K2 595 aaPredicted RBP15.27■□□□□ 0.04
TTC1-201ENST00000231238 PELP1Q8IZL8 1130 aaKnown RBP15.27■□□□□ 0.04
TTC1-201ENST00000231238 RNF25Q96BH1 459 aaPredicted RBP15.27■□□□□ 0.03
TTC1-201ENST00000231238 GRIN2BQ13224 1484 aa15.26■□□□□ 0.03
TTC1-201ENST00000231238 ATN1P54259 1190 aaPredicted RBP15.25■□□□□ 0.03
TTC1-201ENST00000231238 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
TTC1-201ENST00000231238 ZNF608Q9ULD9 1512 aaPredicted RBP15.23■□□□□ 0.03
TTC1-201ENST00000231238 ECM2O94769 699 aaPredicted RBP15.22■□□□□ 0.03
TTC1-201ENST00000231238 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
TTC1-201ENST00000231238 TMEM106CQ9BVX2 250 aa15.2■□□□□ 0.02
TTC1-201ENST00000231238 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
TTC1-201ENST00000231238 FHAD1B1AJZ9 1412 aa15.19■□□□□ 0.02
TTC1-201ENST00000231238 PSEN1P49768 467 aa15.16■□□□□ 0.02
TTC1-201ENST00000231238 SNAPC4Q5SXM2 1469 aa15.15■□□□□ 0.02
TTC1-201ENST00000231238 RIOK3O14730 519 aaKnown RBP15.14■□□□□ 0.01
TTC1-201ENST00000231238 RGL2O15211 777 aa15.14■□□□□ 0.01
TTC1-201ENST00000231238 ADAMTS12P58397 1594 aa15.14■□□□□ 0.01
TTC1-201ENST00000231238 PDAP1Q13442 181 aaKnown RBP15.14■□□□□ 0.01
TTC1-201ENST00000231238 TRIM35Q9UPQ4 493 aa15.14■□□□□ 0.01
TTC1-201ENST00000231238 CHMP7Q8WUX9 453 aaPredicted RBP15.13■□□□□ 0.01
TTC1-201ENST00000231238 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
TTC1-201ENST00000231238 VPS8Q8N3P4 1428 aa15.1■□□□□ 0.01
TTC1-201ENST00000231238 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
TTC1-201ENST00000231238 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
TTC1-201ENST00000231238 P3H3Q8IVL6 736 aa15.08■□□□□ 0
TTC1-201ENST00000231238 SLC39A7Q92504 469 aa15.07■□□□□ 0
TTC1-201ENST00000231238 ARHGAP35Q9NRY4 1499 aa15.06■□□□□ 0
TTC1-201ENST00000231238 PCGF6Q9BYE7 350 aa15.06■□□□□ 0
TTC1-201ENST00000231238 SYNJ2O15056 1496 aa15.06■□□□□ 0
TTC1-201ENST00000231238 ARAP1Q96P48 1450 aa15.06■□□□□ 0
TTC1-201ENST00000231238 TTBK1Q5TCY1 1321 aaPredicted RBP15.06■□□□□ 0
TTC1-201ENST00000231238 VGFO15240 615 aaPredicted RBP15.05■□□□□ -0
TTC1-201ENST00000231238 TRIM26Q12899 539 aaPredicted RBP15.05■□□□□ -0
TTC1-201ENST00000231238 METRNQ9UJH8 293 aa15.05■□□□□ -0
TTC1-201ENST00000231238 GRIN2AQ12879 1464 aa15.04■□□□□ -0
TTC1-201ENST00000231238 C7P10643 843 aa15.04■□□□□ -0
TTC1-201ENST00000231238 EFCAB5A4FU69 1503 aa15.03■□□□□ -0
TTC1-201ENST00000231238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.03■□□□□ -0
TTC1-201ENST00000231238 ZFP91Q96JP5 570 aaPredicted RBP15.03■□□□□ -0
TTC1-201ENST00000231238 POTEFA5A3E0 1075 aa15.02■□□□□ -0
TTC1-201ENST00000231238 ATP1B4Q9UN42 357 aaPredicted RBP15.01□□□□□ -0.01
TTC1-201ENST00000231238 IQGAP2Q13576 1575 aa15□□□□□ -0.01
TTC1-201ENST00000231238 FHOD3Q2V2M9 1422 aa14.99□□□□□ -0.01
TTC1-201ENST00000231238 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
TTC1-201ENST00000231238 POTEB2H3BUK9 544 aa14.98□□□□□ -0.01
TTC1-201ENST00000231238 IER5LQ5T953 404 aa14.98□□□□□ -0.01
TTC1-201ENST00000231238 COLQQ9Y215 455 aaPredicted RBP14.98□□□□□ -0.01
TTC1-201ENST00000231238 KIAA0586Q9BVV6 1533 aa14.97□□□□□ -0.01
TTC1-201ENST00000231238 CABP2Q9NPB3 220 aa14.97□□□□□ -0.01
TTC1-201ENST00000231238 AMER1Q5JTC6 1135 aaPredicted RBP14.95□□□□□ -0.02
TTC1-201ENST00000231238 FMN1Q68DA7 1419 aa14.94□□□□□ -0.02
TTC1-201ENST00000231238 IRX5P78411 483 aaPredicted RBP14.94□□□□□ -0.02
TTC1-201ENST00000231238 LHX8Q68G74 356 aa14.94□□□□□ -0.02
TTC1-201ENST00000231238 TAOK2Q9UL54 1235 aa14.92□□□□□ -0.02
TTC1-201ENST00000231238 CEP170Q5SW79 1584 aa14.91□□□□□ -0.02
TTC1-201ENST00000231238 BCL11BQ9C0K0 894 aaPredicted RBP14.91□□□□□ -0.02
TTC1-201ENST00000231238 SAMD9Q5K651 1589 aa14.9□□□□□ -0.02
TTC1-201ENST00000231238 GOLGA2Q08379 1002 aa14.9□□□□□ -0.02
TTC1-201ENST00000231238 NUP160Q12769 1436 aa14.9□□□□□ -0.02
TTC1-201ENST00000231238 MKRN3Q13064 507 aaKnown RBP14.89□□□□□ -0.03
TTC1-201ENST00000231238 EFCAB3Q8N7B9 438 aa14.89□□□□□ -0.03
TTC1-201ENST00000231238 UGGT2Q9NYU1 1516 aa14.89□□□□□ -0.03
TTC1-201ENST00000231238 STK25O00506 426 aa14.89□□□□□ -0.03
TTC1-201ENST00000231238 SEC24BO95487 1268 aa14.89□□□□□ -0.03
TTC1-201ENST00000231238 POTEJP0CG39 1038 aa14.88□□□□□ -0.03
TTC1-201ENST00000231238 CARMIL2Q6F5E8 1435 aa14.87□□□□□ -0.03
TTC1-201ENST00000231238 JPH4Q96JJ6 628 aa14.87□□□□□ -0.03
TTC1-201ENST00000231238 STK24Q9Y6E0 443 aa14.87□□□□□ -0.03
TTC1-201ENST00000231238 PCF11O94913 1555 aaKnown RBP14.86□□□□□ -0.03
TTC1-201ENST00000231238 FYCO1Q9BQS8 1478 aa14.86□□□□□ -0.03
TTC1-201ENST00000231238 CHD1O14646 1710 aa14.86□□□□□ -0.03
TTC1-201ENST00000231238 CASKIN1Q8WXD9 1431 aa14.86□□□□□ -0.03
TTC1-201ENST00000231238 OCEL1Q9H607 264 aa14.85□□□□□ -0.03
TTC1-201ENST00000231238 ILDR1Q86SU0 546 aaPredicted RBP14.84□□□□□ -0.03
TTC1-201ENST00000231238 PLCG2P16885 1265 aa14.83□□□□□ -0.03
TTC1-201ENST00000231238 PDCD7Q8N8D1 485 aaKnown RBP14.83□□□□□ -0.03
TTC1-201ENST00000231238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.82□□□□□ -0.042e-6■■■■■ 28.1
TTC1-201ENST00000231238 KIAA0556O60303 1618 aa14.82□□□□□ -0.04
TTC1-201ENST00000231238 KANK4Q5T7N3 995 aaPredicted RBP14.81□□□□□ -0.04
TTC1-201ENST00000231238 DISP1Q96F81 1524 aa14.8□□□□□ -0.04
TTC1-201ENST00000231238 TIAM1Q13009 1591 aa14.8□□□□□ -0.04
TTC1-201ENST00000231238 MAP3K1Q13233 1512 aa14.79□□□□□ -0.04
TTC1-201ENST00000231238 CHGAP10645 457 aaKnown RBP14.78□□□□□ -0.04
TTC1-201ENST00000231238 HS6ST3Q8IZP7 471 aa14.78□□□□□ -0.04
TTC1-201ENST00000231238 PRG4Q92954 1404 aaPredicted RBP14.77□□□□□ -0.04
TTC1-201ENST00000231238 HECW1Q76N89 1606 aa14.77□□□□□ -0.05
TTC1-201ENST00000231238 MTUS2Q5JR59 1369 aa14.76□□□□□ -0.05
TTC1-201ENST00000231238 ARID3CA6NKF2 412 aa14.76□□□□□ -0.05
TTC1-201ENST00000231238 DPY19L2Q6NUT2 758 aa14.76□□□□□ -0.05
TTC1-201ENST00000231238 LRRC9Q6ZRR7 1453 aa14.75□□□□□ -0.05
TTC1-201ENST00000231238 SOX12O15370 315 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms