RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 KDM5BQ9UGL1 1544 aa18.98■□□□□ 0.63
SHPK-201ENST00000225519 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
SHPK-201ENST00000225519 PDE4AP27815 886 aa18.97■□□□□ 0.63
SHPK-201ENST00000225519 ARID3CA6NKF2 412 aa18.96■□□□□ 0.63
SHPK-201ENST00000225519 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
SHPK-201ENST00000225519 USP35Q9P2H5 1018 aa18.96■□□□□ 0.63
SHPK-201ENST00000225519 EXOC6Q8TAG9 804 aa18.95■□□□□ 0.62
SHPK-201ENST00000225519 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
SHPK-201ENST00000225519 EFCAB5A4FU69 1503 aa18.93■□□□□ 0.62
SHPK-201ENST00000225519 HMGXB3Q12766 1538 aa18.93■□□□□ 0.62
SHPK-201ENST00000225519 RNF123Q5XPI4 1314 aa18.91■□□□□ 0.62
SHPK-201ENST00000225519 RRP1P56182 461 aaKnown RBP18.9■□□□□ 0.62
SHPK-201ENST00000225519 RCAN3Q9UKA8 241 aa18.88■□□□□ 0.61
SHPK-201ENST00000225519 DDRGK1Q96HY6 314 aa18.87■□□□□ 0.61
SHPK-201ENST00000225519 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
SHPK-201ENST00000225519 BRPF3Q9ULD4 1205 aa18.86■□□□□ 0.61
SHPK-201ENST00000225519 PNISRQ8TF01 805 aaKnown RBP18.86■□□□□ 0.61
SHPK-201ENST00000225519 BACH2Q9BYV9 841 aa18.86■□□□□ 0.61
SHPK-201ENST00000225519 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
SHPK-201ENST00000225519 GSE1Q14687 1217 aa18.82■□□□□ 0.6
SHPK-201ENST00000225519 MS4A1P11836 297 aa18.82■□□□□ 0.6
SHPK-201ENST00000225519 SUPT6HQ7KZ85 1726 aaKnown RBP18.81■□□□□ 0.6
SHPK-201ENST00000225519 SNAPC4Q5SXM2 1469 aa18.81■□□□□ 0.6
SHPK-201ENST00000225519 USP47Q96K76 1375 aa18.8■□□□□ 0.6
SHPK-201ENST00000225519 SLC4A3P48751 1232 aa18.8■□□□□ 0.6
SHPK-201ENST00000225519 DHX29Q7Z478 1369 aaKnown RBP18.78■□□□□ 0.6
SHPK-201ENST00000225519 ANKRD30BQ9BXX2 1392 aa18.78■□□□□ 0.6
SHPK-201ENST00000225519 DENND4BO75064 1496 aaPredicted RBP18.78■□□□□ 0.6
SHPK-201ENST00000225519 EHBP1L1Q8N3D4 1523 aa18.78■□□□□ 0.6
SHPK-201ENST00000225519 HECW1Q76N89 1606 aa18.77■□□□□ 0.6
SHPK-201ENST00000225519 WASHC2CQ9Y4E1 1318 aa18.77■□□□□ 0.59
SHPK-201ENST00000225519 RPRD2Q5VT52 1461 aaKnown RBP18.76■□□□□ 0.59
SHPK-201ENST00000225519 PLIN1O60240 522 aa18.76■□□□□ 0.59
SHPK-201ENST00000225519 NFKBIBQ15653 356 aa18.76■□□□□ 0.59
SHPK-201ENST00000225519 SKAP1Q86WV1 359 aa18.76■□□□□ 0.59
SHPK-201ENST00000225519 NESP48681 1621 aa18.75■□□□□ 0.59
SHPK-201ENST00000225519 CARD11Q9BXL7 1154 aa18.75■□□□□ 0.59
SHPK-201ENST00000225519 SPATA31E1Q6ZUB1 1445 aa18.74■□□□□ 0.59
SHPK-201ENST00000225519 KDM6BO15054 1643 aa18.73■□□□□ 0.59
SHPK-201ENST00000225519 FRAT1Q92837 279 aaPredicted RBP18.72■□□□□ 0.59
SHPK-201ENST00000225519 KDM2AQ9Y2K7 1162 aa18.72■□□□□ 0.59
SHPK-201ENST00000225519 KIF15Q9NS87 1388 aa18.72■□□□□ 0.59
SHPK-201ENST00000225519 MYBBP1AQ9BQG0 1328 aaKnown RBP18.72■□□□□ 0.59
SHPK-201ENST00000225519 MIA2Q96PC5 1412 aa18.71■□□□□ 0.59
SHPK-201ENST00000225519 UGGT2Q9NYU1 1516 aa18.71■□□□□ 0.59
SHPK-201ENST00000225519 GRIN2BQ13224 1484 aa18.7■□□□□ 0.58
SHPK-201ENST00000225519 RALBP1Q15311 655 aa18.7■□□□□ 0.58
SHPK-201ENST00000225519 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
SHPK-201ENST00000225519 ROCK2O75116 1388 aaKnown RBP18.69■□□□□ 0.58
SHPK-201ENST00000225519 CRBNQ96SW2 442 aa18.69■□□□□ 0.58
SHPK-201ENST00000225519 CDCA7LQ96GN5 454 aa18.69■□□□□ 0.58
SHPK-201ENST00000225519 TEX14Q8IWB6 1497 aa18.69■□□□□ 0.58
SHPK-201ENST00000225519 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
SHPK-201ENST00000225519 PDE3BQ13370 1112 aa18.68■□□□□ 0.58
SHPK-201ENST00000225519 CTTNBP2Q8WZ74 1663 aa18.67■□□□□ 0.58
SHPK-201ENST00000225519 GCC2Q8IWJ2 1684 aa18.67■□□□□ 0.58
SHPK-201ENST00000225519 BRD4O60885 1362 aaPredicted RBP18.67■□□□□ 0.58
SHPK-201ENST00000225519 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
SHPK-201ENST00000225519 ARID4BQ4LE39 1312 aaPredicted RBP18.66■□□□□ 0.58
SHPK-201ENST00000225519 PKD2Q13563 968 aa18.66■□□□□ 0.58
SHPK-201ENST00000225519 PDS5BQ9NTI5 1447 aa18.65■□□□□ 0.58
SHPK-201ENST00000225519 POLA1P09884 1462 aaPredicted RBP18.65■□□□□ 0.58
SHPK-201ENST00000225519 ST20-MTHFSA0A0A6YYL1 179 aa18.65■□□□□ 0.58
SHPK-201ENST00000225519 ZNF777Q9ULD5 760 aaPredicted RBP18.65■□□□□ 0.58
SHPK-201ENST00000225519 ZNF644Q9H582 1327 aaPredicted RBP18.65■□□□□ 0.58
SHPK-201ENST00000225519 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
SHPK-201ENST00000225519 CHMP7Q8WUX9 453 aaPredicted RBP18.64■□□□□ 0.57
SHPK-201ENST00000225519 UBE2Q2Q8WVN8 375 aa18.64■□□□□ 0.57
SHPK-201ENST00000225519 NLRP13Q86W25 1043 aa18.64■□□□□ 0.57
SHPK-201ENST00000225519 CUL7Q14999 1698 aa18.63■□□□□ 0.57
SHPK-201ENST00000225519 PRDM2Q13029 1718 aa18.63■□□□□ 0.57
SHPK-201ENST00000225519 ABCA5Q8WWZ7 1642 aa18.62■□□□□ 0.57
SHPK-201ENST00000225519 RGS3P49796 1198 aa18.62■□□□□ 0.57
SHPK-201ENST00000225519 MAGI3Q5TCQ9 1506 aa18.61■□□□□ 0.57
SHPK-201ENST00000225519 LRPPRCP42704 1394 aaKnown RBP18.6■□□□□ 0.57
SHPK-201ENST00000225519 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
SHPK-201ENST00000225519 FRAT2O75474 233 aaPredicted RBP18.59■□□□□ 0.57
SHPK-201ENST00000225519 CC2D1BQ5T0F9 858 aaKnown RBP18.59■□□□□ 0.57
SHPK-201ENST00000225519 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
SHPK-201ENST00000225519 DAPK1P53355 1430 aa18.58■□□□□ 0.57
SHPK-201ENST00000225519 TOPBP1Q92547 1522 aa18.58■□□□□ 0.56
SHPK-201ENST00000225519 LRRIQ1Q96JM4 1722 aa18.57■□□□□ 0.56
SHPK-201ENST00000225519 FAM161AQ3B820 660 aa18.57■□□□□ 0.56
SHPK-201ENST00000225519 ROCK1Q13464 1354 aa18.56■□□□□ 0.56
SHPK-201ENST00000225519 DCAF11Q8TEB1 546 aa18.56■□□□□ 0.56
SHPK-201ENST00000225519 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
SHPK-201ENST00000225519 CDK13Q14004 1512 aaKnown RBP18.55■□□□□ 0.56
SHPK-201ENST00000225519 RSPH6AQ9H0K4 717 aa18.55■□□□□ 0.56
SHPK-201ENST00000225519 ARHGEF11O15085 1522 aa18.54■□□□□ 0.56
SHPK-201ENST00000225519 POLR1AO95602 1720 aaPredicted RBP18.54■□□□□ 0.56
SHPK-201ENST00000225519 BCORL1Q5H9F3 1711 aa18.54■□□□□ 0.56
SHPK-201ENST00000225519 CFDP1Q9UEE9 299 aaPredicted RBP18.54■□□□□ 0.56
SHPK-201ENST00000225519 EPRSP07814 1512 aaKnown RBP18.54■□□□□ 0.56
SHPK-201ENST00000225519 SAMD9Q5K651 1589 aa18.54■□□□□ 0.56
SHPK-201ENST00000225519 ABCC5O15440 1437 aa18.53■□□□□ 0.56
SHPK-201ENST00000225519 C20orf194Q5TEA3 1177 aa18.53■□□□□ 0.56
SHPK-201ENST00000225519 CENPQQ7L2Z9 268 aaPredicted RBP18.53■□□□□ 0.56
SHPK-201ENST00000225519 ARXQ96QS3 562 aa18.53■□□□□ 0.56
SHPK-201ENST00000225519 KIAA1107Q9UPP5 1409 aa18.51■□□□□ 0.55
SHPK-201ENST00000225519 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms