RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 CDK13Q14004 1512 aaKnown RBP15.14■□□□□ 0.01
NEFM-201ENST00000221166 NBR1Q14596 966 aa15.14■□□□□ 0.01
NEFM-201ENST00000221166 CHMP7Q8WUX9 453 aaPredicted RBP15.12■□□□□ 0.01
NEFM-201ENST00000221166 CARD11Q9BXL7 1154 aa15.12■□□□□ 0.01
NEFM-201ENST00000221166 ZBED9Q6R2W3 1325 aa15.12■□□□□ 0.01
NEFM-201ENST00000221166 CTTNBP2Q8WZ74 1663 aa15.1■□□□□ 0.01
NEFM-201ENST00000221166 ERICH6BQ5W0A0 696 aa15.1■□□□□ 0.01
NEFM-201ENST00000221166 EPRSP07814 1512 aaKnown RBP15.09■□□□□ 0.01
NEFM-201ENST00000221166 NPM2Q86SE8 214 aaKnown RBP15.08■□□□□ 0.01
NEFM-201ENST00000221166 FANCIQ9NVI1 1328 aa15.08■□□□□ 0
NEFM-201ENST00000221166 UGGT2Q9NYU1 1516 aa15.07■□□□□ 0
NEFM-201ENST00000221166 RGL3Q3MIN7 710 aa15.07■□□□□ 0
NEFM-201ENST00000221166 MAGI3Q5TCQ9 1506 aa15.07■□□□□ 0
NEFM-201ENST00000221166 TSPY4P0CV99 314 aa15.07■□□□□ 0
NEFM-201ENST00000221166 TSPY10P0CW01 314 aa15.07■□□□□ 0
NEFM-201ENST00000221166 ANKRD30BQ9BXX2 1392 aa15.07■□□□□ 0
NEFM-201ENST00000221166 DCAF11Q8TEB1 546 aa15.06■□□□□ 0
NEFM-201ENST00000221166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 0
NEFM-201ENST00000221166 ANP32AP39687 249 aaKnown RBP15.05■□□□□ -0
NEFM-201ENST00000221166 MIA2Q96PC5 1412 aa15.04■□□□□ -0
NEFM-201ENST00000221166 PLEKHD1A6NEE1 506 aa15.04■□□□□ -0
NEFM-201ENST00000221166 NCOA1Q15788 1441 aa15.04■□□□□ -0
NEFM-201ENST00000221166 NUDCQ9Y266 331 aa15.04■□□□□ -0
NEFM-201ENST00000221166 USP47Q96K76 1375 aa15.04■□□□□ -0
NEFM-201ENST00000221166 DAPK1P53355 1430 aa15.03■□□□□ -0
NEFM-201ENST00000221166 NUP155O75694 1391 aa15.02■□□□□ -0
NEFM-201ENST00000221166 KDM6BO15054 1643 aa15.02□□□□□ -0.01
NEFM-201ENST00000221166 AKNAQ7Z591 1439 aa15.02□□□□□ -0.01
NEFM-201ENST00000221166 ABCC5O15440 1437 aa15.01□□□□□ -0.01
NEFM-201ENST00000221166 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
NEFM-201ENST00000221166 HECW1Q76N89 1606 aa15.01□□□□□ -0.01
NEFM-201ENST00000221166 SAMD9Q5K651 1589 aa15□□□□□ -0.01
NEFM-201ENST00000221166 THOC2Q8NI27 1593 aaKnown RBP15□□□□□ -0.01
NEFM-201ENST00000221166 NOP58Q9Y2X3 529 aaKnown RBP15□□□□□ -0.01
NEFM-201ENST00000221166 PRG4Q92954 1404 aaPredicted RBP15□□□□□ -0.01
NEFM-201ENST00000221166 RTL5Q5HYW3 569 aaPredicted RBP15□□□□□ -0.01
NEFM-201ENST00000221166 LAMC3Q9Y6N6 1575 aa14.99□□□□□ -0.01
NEFM-201ENST00000221166 DENND4BO75064 1496 aaPredicted RBP14.98□□□□□ -0.01
NEFM-201ENST00000221166 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.01
NEFM-201ENST00000221166 KDM5BQ9UGL1 1544 aa14.98□□□□□ -0.01
NEFM-201ENST00000221166 TCOF1Q13428 1488 aaKnown RBP14.98□□□□□ -0.01
NEFM-201ENST00000221166 RPRD2Q5VT52 1461 aaKnown RBP14.98□□□□□ -0.01
NEFM-201ENST00000221166 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
NEFM-201ENST00000221166 IQGAP2Q13576 1575 aa14.97□□□□□ -0.01
NEFM-201ENST00000221166 ANKRD30AQ9BXX3 1397 aa14.97□□□□□ -0.01
NEFM-201ENST00000221166 CC2D1BQ5T0F9 858 aaKnown RBP14.95□□□□□ -0.02
NEFM-201ENST00000221166 ROCK1Q13464 1354 aa14.95□□□□□ -0.02
NEFM-201ENST00000221166 ABCA5Q8WWZ7 1642 aa14.94□□□□□ -0.02
NEFM-201ENST00000221166 DEKP35659 375 aaKnown RBP14.94□□□□□ -0.02
NEFM-201ENST00000221166 JPH4Q96JJ6 628 aa14.93□□□□□ -0.02
NEFM-201ENST00000221166 PAK3O75914 559 aaPredicted RBP14.93□□□□□ -0.02
NEFM-201ENST00000221166 PNISRQ8TF01 805 aaKnown RBP14.93□□□□□ -0.02
NEFM-201ENST00000221166 LRRIQ1Q96JM4 1722 aa14.93□□□□□ -0.02
NEFM-201ENST00000221166 EXOC6Q8TAG9 804 aa14.91□□□□□ -0.02
NEFM-201ENST00000221166 ZNF608Q9ULD9 1512 aaPredicted RBP14.91□□□□□ -0.02
NEFM-201ENST00000221166 ROCK2O75116 1388 aaKnown RBP14.9□□□□□ -0.02
NEFM-201ENST00000221166 KIAA1107Q9UPP5 1409 aa14.9□□□□□ -0.02
NEFM-201ENST00000221166 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
NEFM-201ENST00000221166 ANKRD50Q9ULJ7 1429 aa14.9□□□□□ -0.02
NEFM-201ENST00000221166 RCAN3Q9UKA8 241 aa14.89□□□□□ -0.03
NEFM-201ENST00000221166 SMG6Q86US8 1419 aaKnown RBP14.88□□□□□ -0.03
NEFM-201ENST00000221166 MYT1LQ9UL68 1186 aa14.88□□□□□ -0.03
NEFM-201ENST00000221166 KIF15Q9NS87 1388 aa14.88□□□□□ -0.03
NEFM-201ENST00000221166 TEX14Q8IWB6 1497 aa14.87□□□□□ -0.03
NEFM-201ENST00000221166 RALBP1Q15311 655 aa14.87□□□□□ -0.03
NEFM-201ENST00000221166 MYBBP1AQ9BQG0 1328 aaKnown RBP14.87□□□□□ -0.03
NEFM-201ENST00000221166 TROQ12816 1431 aaPredicted RBP14.87□□□□□ -0.03
NEFM-201ENST00000221166 WDR62O43379 1518 aa14.87□□□□□ -0.03
NEFM-201ENST00000221166 PLIN1O60240 522 aa14.87□□□□□ -0.03
NEFM-201ENST00000221166 PLB1Q6P1J6 1458 aa14.86□□□□□ -0.03
NEFM-201ENST00000221166 NUP153P49790 1475 aaKnown RBP14.86□□□□□ -0.03
NEFM-201ENST00000221166 SPATA31E1Q6ZUB1 1445 aa14.86□□□□□ -0.03
NEFM-201ENST00000221166 IPO9Q96P70 1041 aaKnown RBP14.86□□□□□ -0.03
NEFM-201ENST00000221166 DHX29Q7Z478 1369 aaKnown RBP14.85□□□□□ -0.03
NEFM-201ENST00000221166 GCC2Q8IWJ2 1684 aa14.85□□□□□ -0.03
NEFM-201ENST00000221166 LAS1LQ9Y4W2 734 aaKnown RBP14.85□□□□□ -0.03
NEFM-201ENST00000221166 KIAA0586Q9BVV6 1533 aa14.85□□□□□ -0.03
NEFM-201ENST00000221166 CAMSAP2Q08AD1 1489 aa14.85□□□□□ -0.03
NEFM-201ENST00000221166 RRP1P56182 461 aaKnown RBP14.84□□□□□ -0.03
NEFM-201ENST00000221166 NBPF1Q3BBV0 1214 aa14.84□□□□□ -0.03
NEFM-201ENST00000221166 CARMIL2Q6F5E8 1435 aa14.84□□□□□ -0.03
NEFM-201ENST00000221166 CDCA7LQ96GN5 454 aa14.84□□□□□ -0.03
NEFM-201ENST00000221166 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
NEFM-201ENST00000221166 NLRP13Q86W25 1043 aa14.83□□□□□ -0.04
NEFM-201ENST00000221166 KTN1Q86UP2 1357 aaKnown RBP14.83□□□□□ -0.04
NEFM-201ENST00000221166 MRC2Q9UBG0 1479 aa14.83□□□□□ -0.04
NEFM-201ENST00000221166 DAXXQ9UER7 740 aaPredicted RBP14.83□□□□□ -0.04
NEFM-201ENST00000221166 PZPP20742 1482 aa14.82□□□□□ -0.04
NEFM-201ENST00000221166 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
NEFM-201ENST00000221166 ARID4BQ4LE39 1312 aaPredicted RBP14.81□□□□□ -0.04
NEFM-201ENST00000221166 TARBP1Q13395 1621 aaKnown RBP14.8□□□□□ -0.04
NEFM-201ENST00000221166 PANK3Q9H999 370 aa14.8□□□□□ -0.04
NEFM-201ENST00000221166 GPATCH8Q9UKJ3 1502 aaKnown RBP14.8□□□□□ -0.04
NEFM-201ENST00000221166 ADAMTS12P58397 1594 aa14.79□□□□□ -0.04
NEFM-201ENST00000221166 DISP1Q96F81 1524 aa14.78□□□□□ -0.04
NEFM-201ENST00000221166 C9orf84Q5VXU9 1444 aa14.78□□□□□ -0.04
NEFM-201ENST00000221166 WDR43Q15061 677 aaKnown RBP eCLIP14.78□□□□□ -0.04
NEFM-201ENST00000221166 IFT140Q96RY7 1462 aa14.77□□□□□ -0.04
NEFM-201ENST00000221166 DNMT1P26358 1616 aaKnown RBP14.77□□□□□ -0.04
NEFM-201ENST00000221166 BRD4O60885 1362 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms