RNA–Protein interactions for RNA: ENST00000216146.8

RPL3-201, Transcript of ribosomal protein L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL3, Length 1,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-201ENST00000216146 CDK13Q14004 1512 aaKnown RBP28.94■■■□□ 2.22
RPL3-201ENST00000216146 PLEKHD1A6NEE1 506 aa28.92■■■□□ 2.22
RPL3-201ENST00000216146 FANCAO15360 1455 aa28.91■■■□□ 2.22
RPL3-201ENST00000216146 RICTORQ6R327 1708 aa28.89■■■□□ 2.22
RPL3-201ENST00000216146 VPS8Q8N3P4 1428 aa28.88■■■□□ 2.21
RPL3-201ENST00000216146 LRRIQ1Q96JM4 1722 aa28.87■■■□□ 2.21
RPL3-201ENST00000216146 CDK11AQ9UQ88 783 aaPredicted RBP28.87■■■□□ 2.21
RPL3-201ENST00000216146 CCDC18Q5T9S5 1454 aa28.87■■■□□ 2.21
RPL3-201ENST00000216146 FER1L4A9Z1Z3 1794 aa28.86■■■□□ 2.21
RPL3-201ENST00000216146 DENND4BO75064 1496 aaPredicted RBP28.85■■■□□ 2.21
RPL3-201ENST00000216146 DMRT2Q9Y5R5 561 aa28.85■■■□□ 2.21
RPL3-201ENST00000216146 AKNAQ7Z591 1439 aa28.84■■■□□ 2.21
RPL3-201ENST00000216146 YEATS2Q9ULM3 1422 aa28.84■■■□□ 2.21
RPL3-201ENST00000216146 PREX1Q8TCU6 1659 aa28.84■■■□□ 2.21
RPL3-201ENST00000216146 TTC37Q6PGP7 1564 aa28.84■■■□□ 2.21
RPL3-201ENST00000216146 SIGLEC1Q9BZZ2 1709 aa28.82■■■□□ 2.2
RPL3-201ENST00000216146 STRCQ7RTU9 1775 aa28.82■■■□□ 2.2
RPL3-201ENST00000216146 ZMYM4Q5VZL5 1548 aa28.76■■■□□ 2.2
RPL3-201ENST00000216146 ZFYVE16Q7Z3T8 1539 aa28.76■■■□□ 2.19
RPL3-201ENST00000216146 MLECQ14165 292 aa28.73■■■□□ 2.19
RPL3-201ENST00000216146 CFAP74Q9C0B2 1584 aa28.73■■■□□ 2.19
RPL3-201ENST00000216146 TROQ12816 1431 aaPredicted RBP28.72■■■□□ 2.19
RPL3-201ENST00000216146 MAGI2Q86UL8 1455 aa28.69■■■□□ 2.18
RPL3-201ENST00000216146 SETD1BQ9UPS6 1966 aaKnown RBP28.69■■■□□ 2.18
RPL3-201ENST00000216146 ARHGEF12Q9NZN5 1544 aa28.66■■■□□ 2.18
RPL3-201ENST00000216146 IQSEC2Q5JU85 1478 aa28.65■■■□□ 2.18
RPL3-201ENST00000216146 APLP2Q06481 763 aa28.64■■■□□ 2.18
RPL3-201ENST00000216146 MTUS2Q5JR59 1369 aa28.64■■■□□ 2.18
RPL3-201ENST00000216146 PTPRTO14522 1441 aa28.64■■■□□ 2.17
RPL3-201ENST00000216146 KIF14Q15058 1648 aa28.63■■■□□ 2.17
RPL3-201ENST00000216146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.63■■■□□ 2.174e-6■■■□□ 15.2
RPL3-201ENST00000216146 TIAM1Q13009 1591 aa28.62■■■□□ 2.17
RPL3-201ENST00000216146 UHRF1BP1Q6BDS2 1440 aa28.61■■■□□ 2.17
RPL3-201ENST00000216146 LTBP4Q8N2S1 1624 aa28.6■■■□□ 2.17
RPL3-201ENST00000216146 CEBPAP49715 358 aaPredicted RBP28.59■■■□□ 2.17
RPL3-201ENST00000216146 MAP3K1Q13233 1512 aa28.58■■■□□ 2.17
RPL3-201ENST00000216146 EHBP1L1Q8N3D4 1523 aa28.55■■■□□ 2.16
RPL3-201ENST00000216146 ATP10AO60312 1499 aa28.52■■■□□ 2.16
RPL3-201ENST00000216146 LRRC9Q6ZRR7 1453 aa28.51■■■□□ 2.15
RPL3-201ENST00000216146 C9orf84Q5VXU9 1444 aa28.51■■■□□ 2.15
RPL3-201ENST00000216146 KANK4Q5T7N3 995 aaPredicted RBP28.49■■■□□ 2.15
RPL3-201ENST00000216146 PLCH2O75038 1416 aa28.48■■■□□ 2.15
RPL3-201ENST00000216146 MYO5CQ9NQX4 1742 aa28.48■■■□□ 2.15
RPL3-201ENST00000216146 SCAPERQ9BY12 1400 aa28.44■■■□□ 2.14
RPL3-201ENST00000216146 SUPT6HQ7KZ85 1726 aaKnown RBP28.43■■■□□ 2.14
RPL3-201ENST00000216146 EFCAB2Q5VUJ9 269 aa28.42■■■□□ 2.14
RPL3-201ENST00000216146 CCNB3Q8WWL7 1395 aa28.42■■■□□ 2.14
RPL3-201ENST00000216146 ARHGAP5Q13017 1502 aa28.4■■■□□ 2.14
RPL3-201ENST00000216146 NCOA2Q15596 1464 aa28.39■■■□□ 2.14
RPL3-201ENST00000216146 CDC42BPAQ5VT25 1732 aa28.38■■■□□ 2.13
RPL3-201ENST00000216146 C3P01024 1663 aa28.38■■■□□ 2.13
RPL3-201ENST00000216146 PREX2Q70Z35 1606 aa28.38■■■□□ 2.13
RPL3-201ENST00000216146 GPATCH8Q9UKJ3 1502 aaKnown RBP28.37■■■□□ 2.13
RPL3-201ENST00000216146 CDC42BPBQ9Y5S2 1711 aa28.37■■■□□ 2.13
RPL3-201ENST00000216146 NCOA1Q15788 1441 aa28.36■■■□□ 2.13
RPL3-201ENST00000216146 UBAP1LF5GYI3 381 aa28.35■■■□□ 2.13
RPL3-201ENST00000216146 CFDP1Q9UEE9 299 aaPredicted RBP28.33■■■□□ 2.13
RPL3-201ENST00000216146 ZNF777Q9ULD5 760 aaPredicted RBP28.3■■■□□ 2.12
RPL3-201ENST00000216146 TRAPPC8Q9Y2L5 1435 aa28.3■■■□□ 2.12
RPL3-201ENST00000216146 ITSN2Q9NZM3 1697 aa28.29■■■□□ 2.12
RPL3-201ENST00000216146 MED1Q15648 1581 aaPredicted RBP28.28■■■□□ 2.12
RPL3-201ENST00000216146 ZNF518AQ6AHZ1 1483 aa28.25■■■□□ 2.11
RPL3-201ENST00000216146 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
RPL3-201ENST00000216146 ZNF335Q9H4Z2 1342 aaPredicted RBP28.22■■■□□ 2.11
RPL3-201ENST00000216146 CAMSAP1Q5T5Y3 1602 aa28.22■■■□□ 2.11
RPL3-201ENST00000216146 PPARGC1BQ86YN6 1023 aaKnown RBP28.22■■■□□ 2.11
RPL3-201ENST00000216146 KDM5CP41229 1560 aa28.21■■■□□ 2.11
RPL3-201ENST00000216146 ESF1Q9H501 851 aaKnown RBP28.21■■■□□ 2.11
RPL3-201ENST00000216146 DIP2CQ9Y2E4 1556 aa28.2■■■□□ 2.11
RPL3-201ENST00000216146 SAMD9LQ8IVG5 1584 aa28.2■■■□□ 2.1
RPL3-201ENST00000216146 MYOM3Q5VTT5 1437 aa28.2■■■□□ 2.1
RPL3-201ENST00000216146 ABCC1P33527 1531 aa28.18■■■□□ 2.1
RPL3-201ENST00000216146 ZNF644Q9H582 1327 aaPredicted RBP28.17■■■□□ 2.1
RPL3-201ENST00000216146 PLEKHH2Q8IVE3 1493 aa28.17■■■□□ 2.1
RPL3-201ENST00000216146 AGLP35573 1532 aa28.16■■■□□ 2.1
RPL3-201ENST00000216146 HNRNPMP52272 730 aaKnown RBP eCLIP28.14■■■□□ 2.13e-6■■■□□ 15.6
RPL3-201ENST00000216146 AFAP1Q8N556 730 aa28.14■■■□□ 2.1
RPL3-201ENST00000216146 MIA2Q96PC5 1412 aa28.14■■■□□ 2.1
RPL3-201ENST00000216146 MYT1LQ9UL68 1186 aa28.14■■■□□ 2.1
RPL3-201ENST00000216146 CNTLNQ9NXG0 1405 aa28.13■■■□□ 2.09
RPL3-201ENST00000216146 KIAA1107Q9UPP5 1409 aa28.13■■■□□ 2.09
RPL3-201ENST00000216146 ABCA6Q8N139 1617 aa28.12■■■□□ 2.09
RPL3-201ENST00000216146 NCKAP5LQ9HCH0 1330 aa28.12■■■□□ 2.09
RPL3-201ENST00000216146 HSPA1LP34931 641 aa28.11■■■□□ 2.09
RPL3-201ENST00000216146 SYCP2Q9BX26 1530 aa28.11■■■□□ 2.09
RPL3-201ENST00000216146 CAMSAP2Q08AD1 1489 aa28.1■■■□□ 2.09
RPL3-201ENST00000216146 NPATQ14207 1427 aa28.09■■■□□ 2.09
RPL3-201ENST00000216146 FGD6Q6ZV73 1430 aa28.07■■■□□ 2.08
RPL3-201ENST00000216146 MLH3Q9UHC1 1453 aa28.07■■■□□ 2.08
RPL3-201ENST00000216146 PKD2Q13563 968 aa28.05■■■□□ 2.08
RPL3-201ENST00000216146 MROH2AA6NES4 1674 aa28.05■■■□□ 2.08
RPL3-201ENST00000216146 SCAF1Q9H7N4 1312 aaKnown RBP28.04■■■□□ 2.08
RPL3-201ENST00000216146 PHF23Q9BUL5 403 aaPredicted RBP28.04■■■□□ 2.08
RPL3-201ENST00000216146 PLA2R1Q13018 1463 aa28.04■■■□□ 2.08
RPL3-201ENST00000216146 PTPN23Q9H3S7 1636 aa28.02■■■□□ 2.08
RPL3-201ENST00000216146 MBD5Q9P267 1494 aa28.02■■■□□ 2.08
RPL3-201ENST00000216146 ZNF142P52746 1687 aaPredicted RBP28.01■■■□□ 2.07
RPL3-201ENST00000216146 RSPH4AQ5TD94 716 aa28.01■■■□□ 2.07
RPL3-201ENST00000216146 PIP4K2BP78356 416 aa28■■■□□ 2.07
RPL3-201ENST00000216146 TCOF1Q13428 1488 aaKnown RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms