RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 URB2Q14146 1524 aaKnown RBP14.91□□□□□ -0.02
ACTN1-201ENST00000193403 NBPF8Q3BBV2 869 aa14.9□□□□□ -0.02
ACTN1-201ENST00000193403 RGL3Q3MIN7 710 aa14.9□□□□□ -0.02
ACTN1-201ENST00000193403 ARXQ96QS3 562 aa14.9□□□□□ -0.02
ACTN1-201ENST00000193403 CARD11Q9BXL7 1154 aa14.89□□□□□ -0.03
ACTN1-201ENST00000193403 EXOC6Q8TAG9 804 aa14.89□□□□□ -0.03
ACTN1-201ENST00000193403 PCF11O94913 1555 aaKnown RBP14.88□□□□□ -0.03
ACTN1-201ENST00000193403 SLC4A3P48751 1232 aa14.87□□□□□ -0.03
ACTN1-201ENST00000193403 PTPRKQ15262 1439 aa14.87□□□□□ -0.03
ACTN1-201ENST00000193403 ZNF608Q9ULD9 1512 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-201ENST00000193403 PLIN1O60240 522 aa14.86□□□□□ -0.03
ACTN1-201ENST00000193403 GAPVD1Q14C86 1478 aa14.86□□□□□ -0.03
ACTN1-201ENST00000193403 SKAP1Q86WV1 359 aa14.84□□□□□ -0.03
ACTN1-201ENST00000193403 NAIPQ13075 1403 aa14.84□□□□□ -0.03
ACTN1-201ENST00000193403 BIVM-ERCC5R4GMW8 1640 aa14.84□□□□□ -0.03
ACTN1-201ENST00000193403 HFM1A2PYH4 1435 aa14.84□□□□□ -0.03
ACTN1-201ENST00000193403 CC2D1BQ5T0F9 858 aaKnown RBP14.84□□□□□ -0.03
ACTN1-201ENST00000193403 RCAN3Q9UKA8 241 aa14.83□□□□□ -0.04
ACTN1-201ENST00000193403 NCOA2Q15596 1464 aa14.82□□□□□ -0.04
ACTN1-201ENST00000193403 RGS3P49796 1198 aa14.82□□□□□ -0.04
ACTN1-201ENST00000193403 ZNF644Q9H582 1327 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-201ENST00000193403 MYOM3Q5VTT5 1437 aa14.82□□□□□ -0.04
ACTN1-201ENST00000193403 CASKIN1Q8WXD9 1431 aa14.82□□□□□ -0.04
ACTN1-201ENST00000193403 PDE4AP27815 886 aa14.81□□□□□ -0.04
ACTN1-201ENST00000193403 PKD2Q13563 968 aa14.81□□□□□ -0.04
ACTN1-201ENST00000193403 CFDP1Q9UEE9 299 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-201ENST00000193403 PRKCSHP14314 528 aaPredicted RBP14.78□□□□□ -0.04
ACTN1-201ENST00000193403 DCAF11Q8TEB1 546 aa14.78□□□□□ -0.04
ACTN1-201ENST00000193403 MRC2Q9UBG0 1479 aa14.78□□□□□ -0.04
ACTN1-201ENST00000193403 JPH4Q96JJ6 628 aa14.78□□□□□ -0.04
ACTN1-201ENST00000193403 FYCO1Q9BQS8 1478 aa14.78□□□□□ -0.04
ACTN1-201ENST00000193403 PPM1GO15355 546 aaPredicted RBP14.77□□□□□ -0.05
ACTN1-201ENST00000193403 RRP1P56182 461 aaKnown RBP14.77□□□□□ -0.05
ACTN1-201ENST00000193403 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.05
ACTN1-201ENST00000193403 USP47Q96K76 1375 aa14.76□□□□□ -0.05
ACTN1-201ENST00000193403 ST20-MTHFSA0A0A6YYL1 179 aa14.75□□□□□ -0.05
ACTN1-201ENST00000193403 TCERG1O14776 1098 aaKnown RBP14.75□□□□□ -0.05
ACTN1-201ENST00000193403 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
ACTN1-201ENST00000193403 MAP3K1Q13233 1512 aa14.74□□□□□ -0.05
ACTN1-201ENST00000193403 CDCA7LQ96GN5 454 aa14.74□□□□□ -0.05
ACTN1-201ENST00000193403 CANXP27824 592 aaKnown RBP14.73□□□□□ -0.05
ACTN1-201ENST00000193403 DNMBPQ6XZF7 1577 aa14.73□□□□□ -0.05
ACTN1-201ENST00000193403 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
ACTN1-201ENST00000193403 BRPF3Q9ULD4 1205 aa14.72□□□□□ -0.05
ACTN1-201ENST00000193403 PTPN23Q9H3S7 1636 aa14.71□□□□□ -0.05
ACTN1-201ENST00000193403 CHGAP10645 457 aaKnown RBP14.7□□□□□ -0.06
ACTN1-201ENST00000193403 CRBNQ96SW2 442 aa14.7□□□□□ -0.06
ACTN1-201ENST00000193403 PNISRQ8TF01 805 aaKnown RBP14.7□□□□□ -0.06
ACTN1-201ENST00000193403 SMG6Q86US8 1419 aaKnown RBP14.69□□□□□ -0.06
ACTN1-201ENST00000193403 NCOA1Q15788 1441 aa14.69□□□□□ -0.06
ACTN1-201ENST00000193403 WDR43Q15061 677 aaKnown RBP eCLIP14.69□□□□□ -0.06
ACTN1-201ENST00000193403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.69□□□□□ -0.06
ACTN1-201ENST00000193403 TSPY4P0CV99 314 aa14.68□□□□□ -0.06
ACTN1-201ENST00000193403 TSPY10P0CW01 314 aa14.68□□□□□ -0.06
ACTN1-201ENST00000193403 SNAPC4Q5SXM2 1469 aa14.66□□□□□ -0.06
ACTN1-201ENST00000193403 MYBBP1AQ9BQG0 1328 aaKnown RBP14.65□□□□□ -0.06
ACTN1-201ENST00000193403 NUP155O75694 1391 aa14.64□□□□□ -0.07
ACTN1-201ENST00000193403 NLRP13Q86W25 1043 aa14.63□□□□□ -0.07
ACTN1-201ENST00000193403 BACH2Q9BYV9 841 aa14.63□□□□□ -0.07
ACTN1-201ENST00000193403 KTN1Q86UP2 1357 aaKnown RBP14.63□□□□□ -0.07
ACTN1-201ENST00000193403 KIF15Q9NS87 1388 aa14.63□□□□□ -0.07
ACTN1-201ENST00000193403 CYB5RLQ6IPT4 315 aa14.62□□□□□ -0.07
ACTN1-201ENST00000193403 ABCA10Q8WWZ4 1543 aa14.62□□□□□ -0.07
ACTN1-201ENST00000193403 PLEKHD1A6NEE1 506 aa14.62□□□□□ -0.07
ACTN1-201ENST00000193403 RALBP1Q15311 655 aa14.62□□□□□ -0.07
ACTN1-201ENST00000193403 NEUROD2Q15784 382 aa14.62□□□□□ -0.07
ACTN1-201ENST00000193403 PLPPR3Q6T4P5 718 aa14.62□□□□□ -0.07
ACTN1-201ENST00000193403 ROCK2O75116 1388 aaKnown RBP14.62□□□□□ -0.07
ACTN1-201ENST00000193403 GSE1Q14687 1217 aa14.61□□□□□ -0.07
ACTN1-201ENST00000193403 SLKQ9H2G2 1235 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-201ENST00000193403 NFKBIBQ15653 356 aa14.61□□□□□ -0.07
ACTN1-201ENST00000193403 GRIN2BQ13224 1484 aa14.6□□□□□ -0.07
ACTN1-201ENST00000193403 SPRYD3Q8NCJ5 442 aa14.6□□□□□ -0.07
ACTN1-201ENST00000193403 ANKRD30BQ9BXX2 1392 aa14.6□□□□□ -0.07
ACTN1-201ENST00000193403 EFCAB5A4FU69 1503 aa14.6□□□□□ -0.07
ACTN1-201ENST00000193403 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-201ENST00000193403 TNNT2P45379 298 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-201ENST00000193403 FRAT1Q92837 279 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-201ENST00000193403 CFAP43Q8NDM7 1665 aa14.58□□□□□ -0.07
ACTN1-201ENST00000193403 NPM1P06748 294 aaKnown RBP eCLIP14.58□□□□□ -0.08
ACTN1-201ENST00000193403 USP35Q9P2H5 1018 aa14.58□□□□□ -0.08
ACTN1-201ENST00000193403 CCDC146Q8IYE0 955 aa14.58□□□□□ -0.08
ACTN1-201ENST00000193403 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
ACTN1-201ENST00000193403 CDK13Q14004 1512 aaKnown RBP14.57□□□□□ -0.08
ACTN1-201ENST00000193403 C20orf194Q5TEA3 1177 aa14.57□□□□□ -0.08
ACTN1-201ENST00000193403 KNSTRNQ9Y448 316 aa14.56□□□□□ -0.08
ACTN1-201ENST00000193403 PANK3Q9H999 370 aa14.56□□□□□ -0.08
ACTN1-201ENST00000193403 FRAT2O75474 233 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-201ENST00000193403 MS4A1P11836 297 aa14.54□□□□□ -0.08
ACTN1-201ENST00000193403 EHBP1L1Q8N3D4 1523 aa14.54□□□□□ -0.08
ACTN1-201ENST00000193403 SUPT6HQ7KZ85 1726 aaKnown RBP14.54□□□□□ -0.08
ACTN1-201ENST00000193403 PDE3BQ13370 1112 aa14.53□□□□□ -0.08
ACTN1-201ENST00000193403 HNRNPMP52272 730 aaKnown RBP eCLIP14.53□□□□□ -0.081e-6■■■■□ 24.2
ACTN1-201ENST00000193403 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
ACTN1-201ENST00000193403 NBPF1Q3BBV0 1214 aa14.52□□□□□ -0.09
ACTN1-201ENST00000193403 RPRD2Q5VT52 1461 aaKnown RBP14.52□□□□□ -0.09
ACTN1-201ENST00000193403 GZF1Q9H116 711 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-201ENST00000193403 DHX29Q7Z478 1369 aaKnown RBP14.51□□□□□ -0.09
ACTN1-201ENST00000193403 UPF2Q9HAU5 1272 aaKnown RBP14.51□□□□□ -0.09
ACTN1-201ENST00000193403 BRD4O60885 1362 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms