RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
SEMA3F-201ENST00000002829 JPH4Q96JJ6 628 aa18.14■□□□□ 0.49
SEMA3F-201ENST00000002829 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.49
SEMA3F-201ENST00000002829 NCOA2Q15596 1464 aa18.12■□□□□ 0.49
SEMA3F-201ENST00000002829 PLIN1O60240 522 aa18.11■□□□□ 0.49
SEMA3F-201ENST00000002829 NEFMP07197 916 aa18.1■□□□□ 0.49
SEMA3F-201ENST00000002829 KIF7Q2M1P5 1343 aa18.09■□□□□ 0.49
SEMA3F-201ENST00000002829 TIAM1Q13009 1591 aa18.09■□□□□ 0.49
SEMA3F-201ENST00000002829 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
SEMA3F-201ENST00000002829 SAFB2Q14151 953 aaKnown RBP eCLIP18.08■□□□□ 0.48
SEMA3F-201ENST00000002829 PTPRKQ15262 1439 aa18.07■□□□□ 0.48
SEMA3F-201ENST00000002829 MYOM3Q5VTT5 1437 aa18.07■□□□□ 0.48
SEMA3F-201ENST00000002829 RGS3P49796 1198 aa18.06■□□□□ 0.48
SEMA3F-201ENST00000002829 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
SEMA3F-201ENST00000002829 NUTM2DQ5VT03 806 aaPredicted RBP18.06■□□□□ 0.48
SEMA3F-201ENST00000002829 TOPBP1Q92547 1522 aa18.05■□□□□ 0.48
SEMA3F-201ENST00000002829 CASKIN1Q8WXD9 1431 aa18.05■□□□□ 0.48
SEMA3F-201ENST00000002829 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
SEMA3F-201ENST00000002829 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
SEMA3F-201ENST00000002829 UACAQ9BZF9 1416 aa18.04■□□□□ 0.48
SEMA3F-201ENST00000002829 PCF11O94913 1555 aaKnown RBP18.03■□□□□ 0.48
SEMA3F-201ENST00000002829 MAPKBP1O60336 1514 aa18.01■□□□□ 0.47
SEMA3F-201ENST00000002829 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
SEMA3F-201ENST00000002829 KNSTRNQ9Y448 316 aa18■□□□□ 0.47
SEMA3F-201ENST00000002829 CDK13Q14004 1512 aaKnown RBP17.99■□□□□ 0.47
SEMA3F-201ENST00000002829 SKAP1Q86WV1 359 aa17.99■□□□□ 0.47
SEMA3F-201ENST00000002829 CCDC146Q8IYE0 955 aa17.99■□□□□ 0.47
SEMA3F-201ENST00000002829 NAIPQ13075 1403 aa17.99■□□□□ 0.47
SEMA3F-201ENST00000002829 ROCK2O75116 1388 aaKnown RBP17.99■□□□□ 0.47
SEMA3F-201ENST00000002829 CCDC7Q96M83 1385 aa17.98■□□□□ 0.47
SEMA3F-201ENST00000002829 NBPF1Q3BBV0 1214 aa17.98■□□□□ 0.47
SEMA3F-201ENST00000002829 USP47Q96K76 1375 aa17.97■□□□□ 0.47
SEMA3F-201ENST00000002829 PLEKHG5O94827 1062 aa17.97■□□□□ 0.47
SEMA3F-201ENST00000002829 PRG4Q92954 1404 aaPredicted RBP17.96■□□□□ 0.47
SEMA3F-201ENST00000002829 EXOC6Q8TAG9 804 aa17.96■□□□□ 0.47
SEMA3F-201ENST00000002829 FRAT1Q92837 279 aaPredicted RBP17.95■□□□□ 0.46
SEMA3F-201ENST00000002829 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
SEMA3F-201ENST00000002829 CDCA7LQ96GN5 454 aa17.95■□□□□ 0.46
SEMA3F-201ENST00000002829 SLC24A1O60721 1099 aa17.94■□□□□ 0.46
SEMA3F-201ENST00000002829 PPM1GO15355 546 aaPredicted RBP17.93■□□□□ 0.46
SEMA3F-201ENST00000002829 PANK3Q9H999 370 aa17.92■□□□□ 0.46
SEMA3F-201ENST00000002829 GGT6Q6P531 493 aa17.92■□□□□ 0.46
SEMA3F-201ENST00000002829 NUDCQ9Y266 331 aa17.92■□□□□ 0.46
SEMA3F-201ENST00000002829 ANKRD30AQ9BXX3 1397 aa17.92■□□□□ 0.46
SEMA3F-201ENST00000002829 RCAN3Q9UKA8 241 aa17.92■□□□□ 0.46
SEMA3F-201ENST00000002829 AKNAQ7Z591 1439 aa17.91■□□□□ 0.46
SEMA3F-201ENST00000002829 FYCO1Q9BQS8 1478 aa17.9■□□□□ 0.46
SEMA3F-201ENST00000002829 HFM1A2PYH4 1435 aa17.9■□□□□ 0.46
SEMA3F-201ENST00000002829 PRKCSHP14314 528 aaPredicted RBP17.89■□□□□ 0.45
SEMA3F-201ENST00000002829 FANCIQ9NVI1 1328 aa17.89■□□□□ 0.45
SEMA3F-201ENST00000002829 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
SEMA3F-201ENST00000002829 PRDM2Q13029 1718 aa17.87■□□□□ 0.45
SEMA3F-201ENST00000002829 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
SEMA3F-201ENST00000002829 TMF1P82094 1093 aa17.86■□□□□ 0.45
SEMA3F-201ENST00000002829 STK26Q9P289 416 aa17.86■□□□□ 0.45
SEMA3F-201ENST00000002829 RRP7AQ9Y3A4 280 aaKnown RBP17.86■□□□□ 0.45
SEMA3F-201ENST00000002829 KIF3BO15066 747 aa17.85■□□□□ 0.45
SEMA3F-201ENST00000002829 IPO9Q96P70 1041 aaKnown RBP17.85■□□□□ 0.45
SEMA3F-201ENST00000002829 ARID4BQ4LE39 1312 aaPredicted RBP17.85■□□□□ 0.45
SEMA3F-201ENST00000002829 NPM1P06748 294 aaKnown RBP eCLIP17.85■□□□□ 0.45
SEMA3F-201ENST00000002829 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
SEMA3F-201ENST00000002829 URB2Q14146 1524 aaKnown RBP17.84■□□□□ 0.45
SEMA3F-201ENST00000002829 CNTLNQ9NXG0 1405 aa17.82■□□□□ 0.44
SEMA3F-201ENST00000002829 SPRYD3Q8NCJ5 442 aa17.82■□□□□ 0.44
SEMA3F-201ENST00000002829 BCL2L13Q9BXK5 485 aa17.81■□□□□ 0.44
SEMA3F-201ENST00000002829 AFAP1Q8N556 730 aa17.81■□□□□ 0.44
SEMA3F-201ENST00000002829 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
SEMA3F-201ENST00000002829 KTN1Q86UP2 1357 aaKnown RBP17.8■□□□□ 0.44
SEMA3F-201ENST00000002829 CLUAP1Q96AJ1 413 aa17.8■□□□□ 0.44
SEMA3F-201ENST00000002829 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
SEMA3F-201ENST00000002829 ZNF608Q9ULD9 1512 aaPredicted RBP17.79■□□□□ 0.44
SEMA3F-201ENST00000002829 TRAK1Q9UPV9 953 aa17.78■□□□□ 0.44
SEMA3F-201ENST00000002829 U2SURPO15042 1029 aaKnown RBP17.78■□□□□ 0.44
SEMA3F-201ENST00000002829 MLECQ14165 292 aa17.78■□□□□ 0.44
SEMA3F-201ENST00000002829 NLRP13Q86W25 1043 aa17.78■□□□□ 0.44
SEMA3F-201ENST00000002829 ANKRD50Q9ULJ7 1429 aa17.77■□□□□ 0.44
SEMA3F-201ENST00000002829 BRPF3Q9ULD4 1205 aa17.77■□□□□ 0.44
SEMA3F-201ENST00000002829 KIF15Q9NS87 1388 aa17.77■□□□□ 0.43
SEMA3F-201ENST00000002829 CRBNQ96SW2 442 aa17.76■□□□□ 0.43
SEMA3F-201ENST00000002829 PLB1Q6P1J6 1458 aa17.76■□□□□ 0.43
SEMA3F-201ENST00000002829 SOX12O15370 315 aa17.75■□□□□ 0.43
SEMA3F-201ENST00000002829 EPRSP07814 1512 aaKnown RBP17.75■□□□□ 0.43
SEMA3F-201ENST00000002829 DNMBPQ6XZF7 1577 aa17.75■□□□□ 0.43
SEMA3F-201ENST00000002829 PTPRGP23470 1445 aa17.75■□□□□ 0.43
SEMA3F-201ENST00000002829 MYBBP1AQ9BQG0 1328 aaKnown RBP17.73■□□□□ 0.43
SEMA3F-201ENST00000002829 PNISRQ8TF01 805 aaKnown RBP17.73■□□□□ 0.43
SEMA3F-201ENST00000002829 RRP1P56182 461 aaKnown RBP17.72■□□□□ 0.43
SEMA3F-201ENST00000002829 RALBP1Q15311 655 aa17.72■□□□□ 0.43
SEMA3F-201ENST00000002829 APAF1O14727 1248 aa17.71■□□□□ 0.43
SEMA3F-201ENST00000002829 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.71■□□□□ 0.43
SEMA3F-201ENST00000002829 ADAMTS8Q9UP79 889 aa17.71■□□□□ 0.43
SEMA3F-201ENST00000002829 CCDC144AA2RUR9 1427 aa17.71■□□□□ 0.43
SEMA3F-201ENST00000002829 EFCAB2Q5VUJ9 269 aa17.71■□□□□ 0.43
SEMA3F-201ENST00000002829 ANKRD30BQ9BXX2 1392 aa17.71■□□□□ 0.43
SEMA3F-201ENST00000002829 DAPK1P53355 1430 aa17.71■□□□□ 0.43
SEMA3F-201ENST00000002829 ABCC5O15440 1437 aa17.69■□□□□ 0.42
SEMA3F-201ENST00000002829 SLKQ9H2G2 1235 aaPredicted RBP17.69■□□□□ 0.42
SEMA3F-201ENST00000002829 PDE4AP27815 886 aa17.69■□□□□ 0.42
SEMA3F-201ENST00000002829 TMEM132EQ6IEE7 984 aa17.68■□□□□ 0.42
SEMA3F-201ENST00000002829 SPAG9O60271 1321 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms