RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Dhx57Q6P5D3 1388 aaKnown RBP20.79■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 Cwc22Q8C5N3 908 aaKnown RBP20.77■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 Ifit1bl1D3Z6F0 470 aa20.76■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Bcl11aQ9QYE3 773 aa20.75■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Urb2E9Q7L1 1524 aaKnown RBP20.75■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Dbr1Q923B1 550 aa20.75■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Htatsf1Q8BGC0 757 aa20.75■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Jph4Q80WT0 628 aa20.74■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Neurod2Q62414 383 aa20.73■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Sox12Q04890 314 aa20.72■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Spryd3E9Q9B3 442 aa20.71■□□□□ 0.91
Pcdh1-203ENSMUST00000160721 Ppm1gQ61074 542 aa20.68■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Mapk8ip3Q9ESN9 1337 aa20.66■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 B4galnt3Q6L8S8 986 aa20.66■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Mphosph9A6H5Y1 991 aa20.66■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Ecm2Q5FW85 670 aa20.66■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Znf316Q6PGE4 1016 aa20.66■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Armcx1Q9CX83 456 aa20.65■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Ccnb3Q810T2 1396 aa20.65■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Rad54l2Q99NG0 1466 aa20.65■□□□□ 0.9
Pcdh1-203ENSMUST00000160721 Slc4a3P16283 1227 aa20.64■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Nup155Q99P88 1391 aaKnown RBP20.64■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Rtn4Q99P72 1162 aaKnown RBP20.63■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Gtf2e1Q9D0D5 440 aa20.62■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Rundc1Q0VDN7 615 aa20.62■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Mrc2Q64449 1479 aa20.62■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Dnajc5bQ9CQ94 199 aa20.61■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Plekhh2Q8C115 1491 aa20.61■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Arhgap35Q91YM2 1499 aa20.6■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 1700019A02RikA0A087WPV9 146 aa20.6■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Irx3P81067 507 aa20.6■□□□□ 0.89
Pcdh1-203ENSMUST00000160721 Shroom4Q1W617 1475 aa20.58■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Plin1Q8CGN5 517 aa20.57■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Rsph4aQ8BYM7 716 aa20.56■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Frmpd1A2AKB4 1549 aa20.53■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Gm6268A2A3U9 297 aa20.53■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Efcab5A0JP43 1406 aa20.52■□□□□ 0.88
Pcdh1-203ENSMUST00000160721 Tdrd9Q14BI7 1383 aa20.52■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Iqcf3Q9D498 203 aa20.51■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Cc2d2bA0A286YDU8 1405 aa20.5■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Duox2A2AQ99 1517 aa20.5■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Wwc2Q6NXJ0 1187 aa20.49■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Birc3O08863 600 aa20.48■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Fan1Q69ZT1 1020 aa20.48■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Map7O88735 730 aa20.48■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Utp14aQ640M1 767 aaKnown RBP20.47■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Spag9Q58A65 1321 aaKnown RBP20.47■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Casc1Q6TDU8 730 aa20.46■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Zfp777B9EKF4 885 aa20.46■□□□□ 0.87
Pcdh1-203ENSMUST00000160721 Q8BT18 775 aa20.45■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Sin3aQ60520 1274 aaKnown RBP20.44■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Pip4k2bQ80XI4 416 aa20.44■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Supt16hQ920B9 1047 aa20.44■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Ncoa2Q61026 1462 aa20.43■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Dnttip2Q8R2M2 758 aaKnown RBP20.43■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Fhad1A6PWD2 1420 aa20.42■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Fgd6Q69ZL1 1399 aa20.42■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Cc2d2aQ8CFW7 1633 aa20.42■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 HdgfP51859 237 aaKnown RBP20.41■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 NudcO35685 332 aaKnown RBP20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 BicraF8VPZ9 1578 aa20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Znf326O88291 580 aa20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Tcerg1Q8CGF7 1100 aaKnown RBP20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Bcl11bQ99PV8 884 aa20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 Srcin1Q9QWI6 1250 aa20.4■□□□□ 0.86
Pcdh1-203ENSMUST00000160721 AU015836B2RUM3 263 aa20.39■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Erich6bQ9D4S6 220 aa20.38■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Shq1Q7TMX5 569 aa20.38■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Rwdd1Q9CQK7 243 aa20.37■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Hsp90b1P08113 802 aaKnown RBP20.36■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Dcaf11Q91VU6 549 aa20.36■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Ubap1lG3UW59 384 aa20.36■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 PnnO35691 725 aaKnown RBP20.36■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Plb1Q3TTY0 1478 aa20.36■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 PogzQ8BZH4 1409 aaKnown RBP20.35■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Chmp4bQ9D8B3 224 aaKnown RBP20.34■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Ap3b2Q9JME5 1082 aa20.34■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Tmf1B9EKI3 1091 aa20.34■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Pes1Q9EQ61 584 aaKnown RBP20.34■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Rock2P70336 1388 aa20.34■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Adam1bQ8R534 806 aa20.33■□□□□ 0.85
Pcdh1-203ENSMUST00000160721 Rtf1A2AQ19 715 aaKnown RBP20.33■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Mbd3Q9Z2D8 285 aaKnown RBP20.32■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Chmp5Q9D7S9 219 aa20.32■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 KnstrnQ9D9Z1 312 aaKnown RBP20.31■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 U2surpQ6NV83 1029 aaKnown RBP20.31■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Dnai1Q8C0M8 701 aa20.31■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Tnnt2P50752 301 aa20.3■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Clstn1Q9EPL2 979 aa20.3■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Arhgap31A6X8Z5 1425 aa20.3■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 U2af1Q9D883 239 aaKnown RBP20.29■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 UacaQ8CGB3 1411 aa20.28■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Exoc6Q8R313 802 aa20.27■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Senp3Q9EP97 568 aaKnown RBP20.27■□□□□ 0.84
Pcdh1-203ENSMUST00000160721 Tnnt1O88346 262 aa20.26■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Top2aQ01320 1528 aaKnown RBP20.26■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Grin2bQ01097 1482 aa20.26■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Ipo9Q91YE6 1041 aa20.25■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Pak3Q61036 559 aa20.25■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Gm14025A2AP89 1413 aa20.25■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms