RNA–Protein interactions for RNA: ENSMUST00000129269.7

Stag1-206, Transcript of Cohesin subunit SA-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stag1, Length 6,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-206ENSMUST00000129269 Rundc1Q0VDN7 615 aa18.05■□□□□ 0.48
Stag1-206ENSMUST00000129269 NudcO35685 332 aaKnown RBP18.03■□□□□ 0.48
Stag1-206ENSMUST00000129269 Ap3b2Q9JME5 1082 aa18.03■□□□□ 0.48
Stag1-206ENSMUST00000129269 Mia2Q91ZV0 1396 aa18.02■□□□□ 0.48
Stag1-206ENSMUST00000129269 Utp14aQ640M1 767 aaKnown RBP18.01■□□□□ 0.47
Stag1-206ENSMUST00000129269 Fmn1Q05860 1466 aa18■□□□□ 0.47
Stag1-206ENSMUST00000129269 Hsp90ab1P11499 724 aaKnown RBP18■□□□□ 0.47
Stag1-206ENSMUST00000129269 Soga1E1U8D0 1418 aa17.99■□□□□ 0.47
Stag1-206ENSMUST00000129269 Nol10Q5RJG1 687 aaKnown RBP17.99■□□□□ 0.47
Stag1-206ENSMUST00000129269 Sh3bp5Q9Z131 463 aa17.99■□□□□ 0.47
Stag1-206ENSMUST00000129269 Fam71e1A1L3C1 212 aa17.98■□□□□ 0.47
Stag1-206ENSMUST00000129269 Ccdc88bQ4QRL3 1481 aa17.98■□□□□ 0.47
Stag1-206ENSMUST00000129269 Q3TQI7 289 aaKnown RBP17.98■□□□□ 0.47
Stag1-206ENSMUST00000129269 Cecr2E9Q2Z1 1453 aa17.97■□□□□ 0.47
Stag1-206ENSMUST00000129269 Shroom4Q1W617 1475 aa17.97■□□□□ 0.47
Stag1-206ENSMUST00000129269 Fan1Q69ZT1 1020 aa17.96■□□□□ 0.47
Stag1-206ENSMUST00000129269 Pibf1E9Q6K3 756 aa17.96■□□□□ 0.46
Stag1-206ENSMUST00000129269 U2af1Q9D883 239 aaKnown RBP17.95■□□□□ 0.46
Stag1-206ENSMUST00000129269 Hsp90b1P08113 802 aaKnown RBP17.95■□□□□ 0.46
Stag1-206ENSMUST00000129269 Rsph4aQ8BYM7 716 aa17.95■□□□□ 0.46
Stag1-206ENSMUST00000129269 Dcaf11Q91VU6 549 aa17.94■□□□□ 0.46
Stag1-206ENSMUST00000129269 Fhad1A6PWD2 1420 aa17.94■□□□□ 0.46
Stag1-206ENSMUST00000129269 Nup155Q99P88 1391 aaKnown RBP17.93■□□□□ 0.46
Stag1-206ENSMUST00000129269 Dhx57Q6P5D3 1388 aaKnown RBP17.93■□□□□ 0.46
Stag1-206ENSMUST00000129269 Dbr1Q923B1 550 aa17.92■□□□□ 0.46
Stag1-206ENSMUST00000129269 Atad2bE9Q166 1460 aaKnown RBP17.92■□□□□ 0.46
Stag1-206ENSMUST00000129269 Dhx29Q6PGC1 1365 aaKnown RBP17.91■□□□□ 0.46
Stag1-206ENSMUST00000129269 CatipB9EKE5 520 aa17.91■□□□□ 0.46
Stag1-206ENSMUST00000129269 Cep162Q6ZQ06 1403 aa17.9■□□□□ 0.46
Stag1-206ENSMUST00000129269 Rassf8Q8CJ96 419 aa17.9■□□□□ 0.46
Stag1-206ENSMUST00000129269 Cabp4Q8VHC5 271 aa17.9■□□□□ 0.46
Stag1-206ENSMUST00000129269 Mphosph9A6H5Y1 991 aa17.9■□□□□ 0.46
Stag1-206ENSMUST00000129269 Shq1Q7TMX5 569 aa17.9■□□□□ 0.46
Stag1-206ENSMUST00000129269 Tmco5bQ80X59 307 aa17.89■□□□□ 0.45
Stag1-206ENSMUST00000129269 LrpprcQ6PB66 1392 aaKnown RBP17.88■□□□□ 0.45
Stag1-206ENSMUST00000129269 Wwc2Q6NXJ0 1187 aa17.88■□□□□ 0.45
Stag1-206ENSMUST00000129269 PnnO35691 725 aaKnown RBP17.87■□□□□ 0.45
Stag1-206ENSMUST00000129269 Chmp3Q9CQ10 224 aa17.86■□□□□ 0.45
Stag1-206ENSMUST00000129269 Fyco1Q8VDC1 1437 aa17.86■□□□□ 0.45
Stag1-206ENSMUST00000129269 Tmf1B9EKI3 1091 aa17.86■□□□□ 0.45
Stag1-206ENSMUST00000129269 Cyb5rlB1AS42 316 aa17.86■□□□□ 0.45
Stag1-206ENSMUST00000129269 WrnO09053 1401 aa17.85■□□□□ 0.45
Stag1-206ENSMUST00000129269 Speer4f1Q9D5Q6 258 aa17.84■□□□□ 0.45
Stag1-206ENSMUST00000129269 Chmp4bQ9D8B3 224 aaKnown RBP17.83■□□□□ 0.44
Stag1-206ENSMUST00000129269 Srcin1Q9QWI6 1250 aa17.83■□□□□ 0.44
Stag1-206ENSMUST00000129269 Fbln2P37889 1221 aa17.83■□□□□ 0.44
Stag1-206ENSMUST00000129269 Spag9Q58A65 1321 aaKnown RBP17.82■□□□□ 0.44
Stag1-206ENSMUST00000129269 Znf330Q922H9 316 aa17.82■□□□□ 0.44
Stag1-206ENSMUST00000129269 CanxP35564 591 aaKnown RBP17.81■□□□□ 0.44
Stag1-206ENSMUST00000129269 CftrP26361 1476 aa17.81■□□□□ 0.44
Stag1-206ENSMUST00000129269 Sin3aQ60520 1274 aaKnown RBP17.81■□□□□ 0.44
Stag1-206ENSMUST00000129269 Rock2P70336 1388 aa17.81■□□□□ 0.44
Stag1-206ENSMUST00000129269 Jph4Q80WT0 628 aa17.81■□□□□ 0.44
Stag1-206ENSMUST00000129269 Plekhh2Q8C115 1491 aa17.81■□□□□ 0.44
Stag1-206ENSMUST00000129269 Mink1Q9JM52 1308 aa17.79■□□□□ 0.44
Stag1-206ENSMUST00000129269 CntlnA2AM05 1397 aa17.79■□□□□ 0.44
Stag1-206ENSMUST00000129269 Carmil1Q6EDY6 1374 aa17.78■□□□□ 0.44
Stag1-206ENSMUST00000129269 Atf3Q60765 181 aa17.78■□□□□ 0.44
Stag1-206ENSMUST00000129269 CenpjQ569L8 1344 aa17.78■□□□□ 0.44
Stag1-206ENSMUST00000129269 SafbD3YXK2 937 aaKnown RBP17.77■□□□□ 0.43
Stag1-206ENSMUST00000129269 Fyb1O35601 819 aa17.76■□□□□ 0.43
Stag1-206ENSMUST00000129269 Anapc15P60007 132 aa17.76■□□□□ 0.43
Stag1-206ENSMUST00000129269 B4galnt3Q6L8S8 986 aa17.76■□□□□ 0.43
Stag1-206ENSMUST00000129269 Gm21190A0A0G2JGJ6 266 aa17.75■□□□□ 0.43
Stag1-206ENSMUST00000129269 Ccnb3Q810T2 1396 aa17.75■□□□□ 0.43
Stag1-206ENSMUST00000129269 Sf3b2Q3UJB0 878 aaKnown RBP17.74■□□□□ 0.43
Stag1-206ENSMUST00000129269 Sart3Q9JLI8 962 aaKnown RBP17.74■□□□□ 0.43
Stag1-206ENSMUST00000129269 Slc4a1apE9PX68 744 aa17.73■□□□□ 0.43
Stag1-206ENSMUST00000129269 Evi5lH3BKQ3 813 aa17.73■□□□□ 0.43
Stag1-206ENSMUST00000129269 Sirt1Q923E4 737 aa17.73■□□□□ 0.43
Stag1-206ENSMUST00000129269 Lmod3E9QA62 571 aa17.72■□□□□ 0.43
Stag1-206ENSMUST00000129269 Arhgap35Q91YM2 1499 aa17.72■□□□□ 0.43
Stag1-206ENSMUST00000129269 Smarca4Q3TKT4 1613 aaKnown RBP17.72■□□□□ 0.43
Stag1-206ENSMUST00000129269 Plcb2A3KGF7 1181 aa17.72■□□□□ 0.43
Stag1-206ENSMUST00000129269 Map7O88735 730 aa17.71■□□□□ 0.43
Stag1-206ENSMUST00000129269 PtmaP26350 111 aa17.71■□□□□ 0.43
Stag1-206ENSMUST00000129269 Golga2Q921M4 999 aa17.71■□□□□ 0.43
Stag1-206ENSMUST00000129269 Synj1Q8CHC4 1574 aa17.7■□□□□ 0.42
Stag1-206ENSMUST00000129269 Ddx54Q8K4L0 874 aaKnown RBP17.7■□□□□ 0.42
Stag1-206ENSMUST00000129269 Urb2E9Q7L1 1524 aaKnown RBP17.68■□□□□ 0.42
Stag1-206ENSMUST00000129269 HnrnpuQ8VEK3 800 aaKnown RBP17.68■□□□□ 0.42
Stag1-206ENSMUST00000129269 Sugp2Q8CH09 1067 aa17.67■□□□□ 0.42
Stag1-206ENSMUST00000129269 Rwdd1Q9CQK7 243 aa17.67■□□□□ 0.42
Stag1-206ENSMUST00000129269 Tdrd9Q14BI7 1383 aa17.67■□□□□ 0.42
Stag1-206ENSMUST00000129269 Tcerg1Q8CGF7 1100 aaKnown RBP17.66■□□□□ 0.42
Stag1-206ENSMUST00000129269 Cc2d2bA0A286YDU8 1405 aa17.66■□□□□ 0.42
Stag1-206ENSMUST00000129269 Usp40Q8BWR4 1235 aa17.66■□□□□ 0.42
Stag1-206ENSMUST00000129269 MecomP14404 1042 aa17.64■□□□□ 0.41
Stag1-206ENSMUST00000129269 Cluap1Q8R3P7 413 aa17.64■□□□□ 0.41
Stag1-206ENSMUST00000129269 Stk31Q99MW1 1018 aa17.64■□□□□ 0.41
Stag1-206ENSMUST00000129269 Exoc6Q8R313 802 aa17.64■□□□□ 0.41
Stag1-206ENSMUST00000129269 Tomm22Q9CPQ3 142 aa17.63■□□□□ 0.41
Stag1-206ENSMUST00000129269 Chmp7Q8R1T1 451 aa17.63■□□□□ 0.41
Stag1-206ENSMUST00000129269 Ccdc9Q8VC31 543 aaKnown RBP17.63■□□□□ 0.41
Stag1-206ENSMUST00000129269 MccE9PWI3 1003 aa17.62■□□□□ 0.41
Stag1-206ENSMUST00000129269 Brpf1B2RRD7 1212 aa17.62■□□□□ 0.41
Stag1-206ENSMUST00000129269 Rapgef2Q8CHG7 1496 aa17.61■□□□□ 0.41
Stag1-206ENSMUST00000129269 CrbnQ8C7D2 445 aa17.61■□□□□ 0.41
Stag1-206ENSMUST00000129269 Ksr2Q3UVC0 959 aa17.6■□□□□ 0.41
Stag1-206ENSMUST00000129269 Tsen2Q6P7W5 460 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 541.7 ms