RNA–Protein interactions for RNA: ENSMUST00000117940.1

Hmgb1-rs18-201, mousemouse

BASIC

Gene Hmgb1-rs18, Length 627 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-rs18-201ENSMUST00000117940 Lhx8O35652 367 aa8.25□□□□□ -1.09
Hmgb1-rs18-201ENSMUST00000117940 Msh5Q9QUM7 833 aa8.25□□□□□ -1.09
Hmgb1-rs18-201ENSMUST00000117940 TprnA2AI08 749 aaKnown RBP8.24□□□□□ -1.09
Hmgb1-rs18-201ENSMUST00000117940 Apba2P98084 750 aa8.24□□□□□ -1.09
Hmgb1-rs18-201ENSMUST00000117940 Gga1Q8R0H9 635 aa8.21□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 Irx5Q9JKQ4 484 aa8.21□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 Dnm1lQ8K1M6 742 aa8.2□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 Pdia6Q922R8 440 aaKnown RBP8.2□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 ZyxQ62523 564 aa8.19□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 Ddx11Q6AXC6 880 aa8.19□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 Eya1P97767 591 aa8.18□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 GcgrQ61606 485 aa8.18□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 Ier5lQ99J55 406 aa8.18□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 PsdQ5DTT2 1024 aa8.16□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 Slc12a5Q91V14 1138 aa8.16□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 Ffar3Q3UFD7 319 aa8.15□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 Irx6Q9ER75 438 aa8.15□□□□□ -1.1
Hmgb1-rs18-201ENSMUST00000117940 Pde8bE9Q4S1 865 aa8.14□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Sptlc1O35704 473 aa8.14□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Bcl2l13P59017 434 aa8.14□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Krtap4-1Q3UUY3 169 aa8.14□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Neurod1Q60867 357 aa8.14□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Ciz1Q8VEH2 845 aa8.14□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Inpp5dQ9ES52 1191 aa8.14□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 LipiF6YQT7 476 aa8.13□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Scarf1Q5ND28 820 aa8.13□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Fam117aQ7TNF9 451 aa8.13□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Adnp2Q8CHC8 1165 aaKnown RBP8.13□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 E2f4Q8R0K9 410 aa8.13□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Hmx1O70218 332 aa8.12□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Rad21Q61550 635 aaKnown RBP8.12□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Skiv2lQ6NZR5 1244 aa8.12□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Hoxa2P31245 372 aa8.11□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Ccdc96Q9CR92 584 aa8.11□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Crim1Q9JLL0 1037 aa8.11□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Pelp1Q9DBD5 1123 aaKnown RBP8.1□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 PrimpolQ6P1E7 537 aa8.09□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 EdaraddQ8VHX2 208 aa8.09□□□□□ -1.11
Hmgb1-rs18-201ENSMUST00000117940 Brpf1B2RRD7 1212 aa8.07□□□□□ -1.12
Hmgb1-rs18-201ENSMUST00000117940 Prrt3Q6PE13 971 aa8.06□□□□□ -1.12
Hmgb1-rs18-201ENSMUST00000117940 OscarQ8VBT3 265 aa8.06□□□□□ -1.12
Hmgb1-rs18-201ENSMUST00000117940 Lce6aD3YV94 81 aa8.05□□□□□ -1.12
Hmgb1-rs18-201ENSMUST00000117940 Rtl5Q5DTT4 599 aa8.05□□□□□ -1.12
Hmgb1-rs18-201ENSMUST00000117940 Lrfn2Q80TG9 788 aa8.05□□□□□ -1.12
Hmgb1-rs18-201ENSMUST00000117940 Onecut3Q8K557 490 aa8.05□□□□□ -1.12
Hmgb1-rs18-201ENSMUST00000117940 Pdcd7Q9WTY1 482 aa8.05□□□□□ -1.12
Hmgb1-rs18-201ENSMUST00000117940 Slain2Q8CI08 581 aa8.04□□□□□ -1.12
Hmgb1-rs18-201ENSMUST00000117940 Fmr1nbQ80ZA7 238 aa8.03□□□□□ -1.12
Hmgb1-rs18-201ENSMUST00000117940 Lhx6Q9R1R0 363 aa8.02□□□□□ -1.13
Hmgb1-rs18-201ENSMUST00000117940 Masp1P98064 704 aa8.01□□□□□ -1.13
Hmgb1-rs18-201ENSMUST00000117940 GopcQ8BH60 463 aa8.01□□□□□ -1.13
Hmgb1-rs18-201ENSMUST00000117940 Rasgrp4Q8BTM9 673 aa8□□□□□ -1.13
Hmgb1-rs18-201ENSMUST00000117940 JmyQ9QXM1 983 aa7.99□□□□□ -1.13
Hmgb1-rs18-201ENSMUST00000117940 ElnP54320 860 aa7.98□□□□□ -1.13
Hmgb1-rs18-201ENSMUST00000117940 Irf6P97431 467 aa7.98□□□□□ -1.13
Hmgb1-rs18-201ENSMUST00000117940 Gm11939A2A592 99 aa7.96□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Smpd1Q04519 627 aa7.95□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Gm13695A2AK44 830 aa7.94□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Mllt6B1AR10 1109 aa7.94□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Prr7Q3V0I2 269 aa7.94□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 RragcQ99K70 398 aa7.94□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Mink1Q9JM52 1308 aa7.94□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Mllt3A2AM29 569 aa7.93□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 XpcP51612 930 aa7.93□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Unc5aQ8K1S4 898 aa7.93□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Bcl11bQ99PV8 884 aa7.93□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Znf330Q922H9 316 aa7.92□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 NclP09405 707 aaKnown RBP7.91□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Tmc3Q7TQ69 1130 aa7.91□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Plekhg3Q4VAC9 1341 aa7.9□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Tpcn2Q8BWC0 731 aa7.9□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Tor1aip2Q8BYU6 502 aa7.9□□□□□ -1.14
Hmgb1-rs18-201ENSMUST00000117940 Pcmtd1P59913 357 aa7.89□□□□□ -1.15
Hmgb1-rs18-201ENSMUST00000117940 Klra4Q60651 263 aa7.86□□□□□ -1.15
Hmgb1-rs18-201ENSMUST00000117940 Thap8E9Q695 213 aa7.85□□□□□ -1.15
Hmgb1-rs18-201ENSMUST00000117940 Farp1F8VPU2 1048 aa7.85□□□□□ -1.15
Hmgb1-rs18-201ENSMUST00000117940 Pbx2O35984 430 aa7.85□□□□□ -1.15
Hmgb1-rs18-201ENSMUST00000117940 GnpatP98192 678 aa7.85□□□□□ -1.15
Hmgb1-rs18-201ENSMUST00000117940 RydenQ8CAK3 290 aaKnown RBP7.85□□□□□ -1.15
Hmgb1-rs18-201ENSMUST00000117940 Emid1Q91VF5 444 aa7.85□□□□□ -1.15
Hmgb1-rs18-201ENSMUST00000117940 Nudt12Q9DCN1 462 aa7.85□□□□□ -1.15
Hmgb1-rs18-201ENSMUST00000117940 LtbrP50284 415 aa7.83□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Prom2Q3UUY6 835 aa7.83□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Neurod2Q62414 383 aa7.83□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Setdb2Q8C267 713 aa7.83□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Dnajc5gQ8C632 165 aa7.83□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Rem2Q8VEL9 341 aa7.83□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Znf354bQ9QXT9 601 aa7.83□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Scaf8Q6DID3 1268 aa7.81□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Dixdc1Q80Y83 711 aa7.81□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Psen1P49769 467 aa7.8□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Tsr1Q5SWD9 803 aa7.8□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Foxd4Q60688 444 aa7.8□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Sall2Q9QX96 1004 aa7.8□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Ms4a4cQ9D3F6 226 aa7.79□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Map2k5Q9WVS7 448 aa7.78□□□□□ -1.16
Hmgb1-rs18-201ENSMUST00000117940 Ppfia1B2RXQ2 1266 aa7.77□□□□□ -1.17
Hmgb1-rs18-201ENSMUST00000117940 Myt1Q8CFC2 1127 aa7.77□□□□□ -1.17
Hmgb1-rs18-201ENSMUST00000117940 Kcnv2Q8CFS6 562 aa7.77□□□□□ -1.17
Hmgb1-rs18-201ENSMUST00000117940 Gimap6Q8K349 305 aa7.77□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 39.3 ms