RNA–Protein interactions for RNA: ENSMUST00000117601.7

Limch1-203, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 5 BASIC

Gene Limch1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-203ENSMUST00000117601 Abcc5Q9R1X5 1436 aa11.91□□□□□ -0.5
Limch1-203ENSMUST00000117601 Dnmt1P13864 1620 aaKnown RBP11.91□□□□□ -0.5
Limch1-203ENSMUST00000117601 Vps8Q0P5W1 1427 aa11.91□□□□□ -0.5
Limch1-203ENSMUST00000117601 Mroh2aD3Z750 1679 aa11.91□□□□□ -0.5
Limch1-203ENSMUST00000117601 Tdrd9Q14BI7 1383 aa11.9□□□□□ -0.5
Limch1-203ENSMUST00000117601 Csrnp3P59055 597 aa11.9□□□□□ -0.5
Limch1-203ENSMUST00000117601 Ccdc141E9Q8Q6 1531 aa11.9□□□□□ -0.5
Limch1-203ENSMUST00000117601 NclP09405 707 aaKnown RBP11.9□□□□□ -0.5
Limch1-203ENSMUST00000117601 Magi1Q6RHR9 1471 aa11.9□□□□□ -0.51
Limch1-203ENSMUST00000117601 Map3k4O08648 1597 aa11.89□□□□□ -0.51
Limch1-203ENSMUST00000117601 ClspnQ80YR7 1315 aa11.89□□□□□ -0.51
Limch1-203ENSMUST00000117601 Gcc2Q8CHG3 1679 aa11.88□□□□□ -0.51
Limch1-203ENSMUST00000117601 Arhgef12Q8R4H2 1543 aaKnown RBP11.88□□□□□ -0.51
Limch1-203ENSMUST00000117601 Mtus2Q3UHD3 1353 aa11.87□□□□□ -0.51
Limch1-203ENSMUST00000117601 Adcy10Q8C0T9 1614 aa11.87□□□□□ -0.51
Limch1-203ENSMUST00000117601 Mphosph9A6H5Y1 991 aa11.87□□□□□ -0.51
Limch1-203ENSMUST00000117601 CatipB9EKE5 520 aa11.87□□□□□ -0.51
Limch1-203ENSMUST00000117601 Cdc42bpaQ3UU96 1719 aa11.86□□□□□ -0.51
Limch1-203ENSMUST00000117601 Aplp2Q06335 707 aa11.86□□□□□ -0.51
Limch1-203ENSMUST00000117601 Plekhh2Q8C115 1491 aa11.86□□□□□ -0.51
Limch1-203ENSMUST00000117601 Ncoa2Q61026 1462 aa11.85□□□□□ -0.51
Limch1-203ENSMUST00000117601 Gm14025A2AP89 1413 aa11.84□□□□□ -0.51
Limch1-203ENSMUST00000117601 Fam163aQ8CAA5 168 aa11.84□□□□□ -0.51
Limch1-203ENSMUST00000117601 Kiaa1551Q5DTW7 1521 aa11.84□□□□□ -0.51
Limch1-203ENSMUST00000117601 UacaQ8CGB3 1411 aa11.84□□□□□ -0.51
Limch1-203ENSMUST00000117601 Ccer2J3QPU5 274 aa11.83□□□□□ -0.51
Limch1-203ENSMUST00000117601 Adgrb2Q8CGM1 1561 aa11.83□□□□□ -0.52
Limch1-203ENSMUST00000117601 SphkapQ6NSW3 1687 aa11.81□□□□□ -0.52
Limch1-203ENSMUST00000117601 Abcc1O35379 1528 aa11.81□□□□□ -0.52
Limch1-203ENSMUST00000117601 Arid3cA6PWV5 409 aa11.81□□□□□ -0.52
Limch1-203ENSMUST00000117601 Dhx57Q6P5D3 1388 aaKnown RBP11.8□□□□□ -0.52
Limch1-203ENSMUST00000117601 Pkd2O35245 966 aa11.79□□□□□ -0.52
Limch1-203ENSMUST00000117601 Mapkbp1Q6NS57 1503 aa11.79□□□□□ -0.52
Limch1-203ENSMUST00000117601 Sin3aQ60520 1274 aaKnown RBP11.79□□□□□ -0.52
Limch1-203ENSMUST00000117601 Anks4bQ8K3X6 423 aa11.78□□□□□ -0.52
Limch1-203ENSMUST00000117601 Rrp7aQ9D1C9 280 aaKnown RBP11.78□□□□□ -0.52
Limch1-203ENSMUST00000117601 Znf608Q56A10 1511 aa11.77□□□□□ -0.53
Limch1-203ENSMUST00000117601 Fancd2Q80V62 1450 aa11.77□□□□□ -0.53
Limch1-203ENSMUST00000117601 Ankrd36D3Z4K0 1415 aa11.77□□□□□ -0.53
Limch1-203ENSMUST00000117601 Trappc8E9PWG2 1437 aa11.76□□□□□ -0.53
Limch1-203ENSMUST00000117601 Trak1Q6PD31 939 aa11.76□□□□□ -0.53
Limch1-203ENSMUST00000117601 Sart1Q9Z315 806 aaKnown RBP11.75□□□□□ -0.53
Limch1-203ENSMUST00000117601 Ttll5Q8CHB8 1328 aa11.75□□□□□ -0.53
Limch1-203ENSMUST00000117601 Ythdc2B2RR83 1445 aaKnown RBP11.75□□□□□ -0.53
Limch1-203ENSMUST00000117601 Dhx9O70133 1380 aaKnown RBP11.74□□□□□ -0.53
Limch1-203ENSMUST00000117601 Chd1P40201 1711 aa11.73□□□□□ -0.53
Limch1-203ENSMUST00000117601 Kdm3bQ6ZPY7 1562 aa11.73□□□□□ -0.53
Limch1-203ENSMUST00000117601 Pknox2Q8BG99 474 aa11.73□□□□□ -0.53
Limch1-203ENSMUST00000117601 Il16O54824 1322 aa11.73□□□□□ -0.53
Limch1-203ENSMUST00000117601 Arhgap5P97393 1501 aa11.73□□□□□ -0.53
Limch1-203ENSMUST00000117601 Rrbp1Q99PL5 1605 aaKnown RBP11.73□□□□□ -0.53
Limch1-203ENSMUST00000117601 Rfx7F8VPJ6 1459 aa11.73□□□□□ -0.53
Limch1-203ENSMUST00000117601 Cdk11bP24788 784 aaKnown RBP11.72□□□□□ -0.53
Limch1-203ENSMUST00000117601 Hnrnpul2Q00PI9 745 aaKnown RBP11.72□□□□□ -0.53
Limch1-203ENSMUST00000117601 Usp47Q8BY87 1376 aa11.71□□□□□ -0.53
Limch1-203ENSMUST00000117601 Rgl3Q3UYI5 709 aa11.71□□□□□ -0.53
Limch1-203ENSMUST00000117601 AlkP97793 1621 aa11.71□□□□□ -0.53
Limch1-203ENSMUST00000117601 Mlh3A0A1Y7VMP7 1443 aa11.71□□□□□ -0.53
Limch1-203ENSMUST00000117601 Nop58Q6DFW4 536 aaKnown RBP11.71□□□□□ -0.54
Limch1-203ENSMUST00000117601 Atp10dQ8K2X1 1416 aa11.7□□□□□ -0.54
Limch1-203ENSMUST00000117601 PtprtQ99M80 1454 aa11.7□□□□□ -0.54
Limch1-203ENSMUST00000117601 Map4P27546 1125 aaKnown RBP11.7□□□□□ -0.54
Limch1-203ENSMUST00000117601 Naip5Q9R016 1403 aa11.7□□□□□ -0.54
Limch1-203ENSMUST00000117601 Cul7Q8VE73 1689 aa11.69□□□□□ -0.54
Limch1-203ENSMUST00000117601 Nup155Q99P88 1391 aaKnown RBP11.69□□□□□ -0.54
Limch1-203ENSMUST00000117601 Pabpn1Q8CCS6 302 aaKnown RBP11.69□□□□□ -0.54
Limch1-203ENSMUST00000117601 Ttbk1Q6PCN3 1308 aa11.69□□□□□ -0.54
Limch1-203ENSMUST00000117601 Map3k5O35099 1380 aa11.68□□□□□ -0.54
Limch1-203ENSMUST00000117601 Fam208aQ69ZR9 1610 aaKnown RBP11.67□□□□□ -0.54
Limch1-203ENSMUST00000117601 Caskin1Q6P9K8 1431 aa11.66□□□□□ -0.54
Limch1-203ENSMUST00000117601 Grwd1Q810D6 446 aaKnown RBP11.66□□□□□ -0.54
Limch1-203ENSMUST00000117601 Supt6hQ62383 1726 aaKnown RBP11.65□□□□□ -0.54
Limch1-203ENSMUST00000117601 Gapvd1Q6PAR5 1458 aa11.65□□□□□ -0.55
Limch1-203ENSMUST00000117601 Zbtb4Q5F293 982 aa11.65□□□□□ -0.55
Limch1-203ENSMUST00000117601 NhsB1AV60 1647 aa11.63□□□□□ -0.55
Limch1-203ENSMUST00000117601 Ssh2Q5SW75 1423 aa11.63□□□□□ -0.55
Limch1-203ENSMUST00000117601 Fhod3Q76LL6 1578 aa11.63□□□□□ -0.55
Limch1-203ENSMUST00000117601 Gm13697A2AK42 830 aa11.62□□□□□ -0.55
Limch1-203ENSMUST00000117601 Setbp1Q9Z180 1582 aa11.61□□□□□ -0.55
Limch1-203ENSMUST00000117601 Fgd1P52734 960 aa11.61□□□□□ -0.55
Limch1-203ENSMUST00000117601 Rprd2Q6NXI6 1469 aaKnown RBP11.6□□□□□ -0.55
Limch1-203ENSMUST00000117601 Gm32742A0A1B0GT42 1604 aa11.6□□□□□ -0.55
Limch1-203ENSMUST00000117601 Erich6D3Z6S9 713 aa11.6□□□□□ -0.55
Limch1-203ENSMUST00000117601 Lrrc9Q8CDN9 1456 aa11.59□□□□□ -0.55
Limch1-203ENSMUST00000117601 Wdr7Q920I9 1489 aa11.59□□□□□ -0.55
Limch1-203ENSMUST00000117601 Gm156Q58A37 223 aa11.58□□□□□ -0.56
Limch1-203ENSMUST00000117601 NrdcQ8BHG1 1161 aa11.58□□□□□ -0.56
Limch1-203ENSMUST00000117601 Spag9Q58A65 1321 aaKnown RBP11.58□□□□□ -0.56
Limch1-203ENSMUST00000117601 Igf1rQ60751 1373 aa11.58□□□□□ -0.56
Limch1-203ENSMUST00000117601 Gm38655A0A286YDK6 273 aa11.58□□□□□ -0.56
Limch1-203ENSMUST00000117601 Slc24a1Q91WD8 1130 aa11.58□□□□□ -0.56
Limch1-203ENSMUST00000117601 Kif14L0N7N1 1674 aaKnown RBP11.57□□□□□ -0.56
Limch1-203ENSMUST00000117601 Rnf17Q99MV7 1640 aa11.57□□□□□ -0.56
Limch1-203ENSMUST00000117601 Abca8bQ8K440 1620 aa11.56□□□□□ -0.56
Limch1-203ENSMUST00000117601 Fmn2Q9JL04 1578 aa11.56□□□□□ -0.56
Limch1-203ENSMUST00000117601 Asxl1P59598 1514 aa11.56□□□□□ -0.56
Limch1-203ENSMUST00000117601 Pik3c2gO70167 1506 aa11.56□□□□□ -0.56
Limch1-203ENSMUST00000117601 Pde4cQ3UEI1 686 aa11.55□□□□□ -0.56
Limch1-203ENSMUST00000117601 Kif3bQ61771 747 aa11.55□□□□□ -0.56
Limch1-203ENSMUST00000117601 Cdc42bpbQ7TT50 1713 aa11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 8.3 ms