RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Ipo9Q91YE6 1041 aa19.84■□□□□ 0.77
Ubr2-201ENSMUST00000113335 HnrnpuQ8VEK3 800 aaKnown RBP19.83■□□□□ 0.77
Ubr2-201ENSMUST00000113335 Ecm2Q5FW85 670 aa19.83■□□□□ 0.76
Ubr2-201ENSMUST00000113335 Fhad1A6PWD2 1420 aa19.82■□□□□ 0.76
Ubr2-201ENSMUST00000113335 U2surpQ6NV83 1029 aaKnown RBP19.81■□□□□ 0.76
Ubr2-201ENSMUST00000113335 Map4P27546 1125 aaKnown RBP19.78■□□□□ 0.76
Ubr2-201ENSMUST00000113335 Zfp777B9EKF4 885 aa19.78■□□□□ 0.76
Ubr2-201ENSMUST00000113335 Plin1Q8CGN5 517 aa19.77■□□□□ 0.76
Ubr2-201ENSMUST00000113335 Ercc6F8VPZ5 1481 aa19.77■□□□□ 0.76
Ubr2-201ENSMUST00000113335 Rassf8Q8CJ96 419 aa19.77■□□□□ 0.76
Ubr2-201ENSMUST00000113335 Cluap1Q8R3P7 413 aa19.77■□□□□ 0.76
Ubr2-201ENSMUST00000113335 Zscan21Q07231 555 aa19.76■□□□□ 0.75
Ubr2-201ENSMUST00000113335 MsnP26041 577 aaKnown RBP19.75■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Ifit1bl1D3Z6F0 470 aa19.75■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Tmf1B9EKI3 1091 aa19.75■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Mfap1aC0HKD8 439 aaKnown RBP19.75■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Mfap1bC0HKD9 439 aaKnown RBP19.75■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Ipo8Q7TMY7 1010 aa19.74■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Tmco5bQ80X59 307 aa19.74■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Mak16Q8BGS0 296 aaKnown RBP19.74■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Anapc15P60007 132 aa19.74■□□□□ 0.75
Ubr2-201ENSMUST00000113335 PtmsQ9D0J8 101 aaKnown RBP19.73■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Gm973E9Q295 1059 aa19.73■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Rtf1A2AQ19 715 aaKnown RBP19.72■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Znf330Q922H9 316 aa19.71■□□□□ 0.75
Ubr2-201ENSMUST00000113335 U2af1Q9D883 239 aaKnown RBP19.71■□□□□ 0.75
Ubr2-201ENSMUST00000113335 Gtf2e1Q9D0D5 440 aa19.71■□□□□ 0.75
Ubr2-201ENSMUST00000113335 MyclP10166 368 aa19.69■□□□□ 0.74
Ubr2-201ENSMUST00000113335 Taok2Q6ZQ29 1240 aa19.69■□□□□ 0.74
Ubr2-201ENSMUST00000113335 Kif27Q7M6Z4 1394 aa19.69■□□□□ 0.74
Ubr2-201ENSMUST00000113335 Sart3Q9JLI8 962 aaKnown RBP19.69■□□□□ 0.74
Ubr2-201ENSMUST00000113335 Golga2Q921M4 999 aa19.68■□□□□ 0.74
Ubr2-201ENSMUST00000113335 Stk26Q99JT2 416 aa19.68■□□□□ 0.74
Ubr2-201ENSMUST00000113335 CgnP59242 1191 aa19.68■□□□□ 0.74
Ubr2-201ENSMUST00000113335 Trak1Q6PD31 939 aa19.67■□□□□ 0.74
Ubr2-201ENSMUST00000113335 Mphosph9A6H5Y1 991 aa19.66■□□□□ 0.74
Ubr2-201ENSMUST00000113335 Calcoco2A2A6M5 331 aa19.66■□□□□ 0.74
Ubr2-201ENSMUST00000113335 CrbnQ8C7D2 445 aa19.65■□□□□ 0.74
Ubr2-201ENSMUST00000113335 Dcaf11Q91VU6 549 aa19.65■□□□□ 0.74
Ubr2-201ENSMUST00000113335 GorabQ8BRM2 368 aa19.65■□□□□ 0.74
Ubr2-201ENSMUST00000113335 Cep162Q6ZQ06 1403 aa19.65■□□□□ 0.74
Ubr2-201ENSMUST00000113335 Iffo2Q8R2V2 512 aa19.65■□□□□ 0.74
Ubr2-201ENSMUST00000113335 ChgaP26339 463 aaKnown RBP19.64■□□□□ 0.73
Ubr2-201ENSMUST00000113335 Nolc1E9Q5C9 702 aaKnown RBP19.62■□□□□ 0.73
Ubr2-201ENSMUST00000113335 Ccdc88bQ4QRL3 1481 aa19.62■□□□□ 0.73
Ubr2-201ENSMUST00000113335 Rrp12Q6P5B0 1295 aaKnown RBP19.62■□□□□ 0.73
Ubr2-201ENSMUST00000113335 Senp3Q9EP97 568 aaKnown RBP19.62■□□□□ 0.73
Ubr2-201ENSMUST00000113335 Tnnt1O88346 262 aa19.62■□□□□ 0.73
Ubr2-201ENSMUST00000113335 SlkO54988 1233 aa19.6■□□□□ 0.73
Ubr2-201ENSMUST00000113335 Birc3O08863 600 aa19.6■□□□□ 0.73
Ubr2-201ENSMUST00000113335 Aebp1Q640N1 1128 aa19.59■□□□□ 0.73
Ubr2-201ENSMUST00000113335 Cabp1Q9JLK7 227 aa19.59■□□□□ 0.73
Ubr2-201ENSMUST00000113335 Q3TQI7 289 aaKnown RBP19.59■□□□□ 0.73
Ubr2-201ENSMUST00000113335 Fyco1Q8VDC1 1437 aa19.57■□□□□ 0.72
Ubr2-201ENSMUST00000113335 Rock2P70336 1388 aa19.57■□□□□ 0.72
Ubr2-201ENSMUST00000113335 Arhgap35Q91YM2 1499 aa19.57■□□□□ 0.72
Ubr2-201ENSMUST00000113335 MecomP14404 1042 aa19.57■□□□□ 0.72
Ubr2-201ENSMUST00000113335 Kiaa0754Q69ZZ9 979 aa19.57■□□□□ 0.72
Ubr2-201ENSMUST00000113335 Ksr2Q3UVC0 959 aa19.55■□□□□ 0.72
Ubr2-201ENSMUST00000113335 Pde3bQ61409 1100 aa19.55■□□□□ 0.72
Ubr2-201ENSMUST00000113335 Baz1bQ9Z277 1479 aa19.55■□□□□ 0.72
Ubr2-201ENSMUST00000113335 CrebrfQ8CDG5 640 aaKnown RBP19.54■□□□□ 0.72
Ubr2-201ENSMUST00000113335 RdxP26043 583 aaKnown RBP19.54■□□□□ 0.72
Ubr2-201ENSMUST00000113335 Gpatch11Q3UFS4 262 aa19.53■□□□□ 0.72
Ubr2-201ENSMUST00000113335 R3hcc1Q8BSI6 488 aa19.51■□□□□ 0.71
Ubr2-201ENSMUST00000113335 CntlnA2AM05 1397 aa19.51■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Cald1E9QA15 768 aaKnown RBP19.5■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Ccar1Q8CH18 1146 aaKnown RBP19.5■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Smarce1O54941 411 aaKnown RBP19.49■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Eif4g2Q62448 906 aaKnown RBP19.49■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Brpf1B2RRD7 1212 aa19.48■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Tpm3-rs7D3Z2H9 248 aa19.48■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Gtf3c3Q3TMP1 882 aa19.48■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Nol10Q5RJG1 687 aaKnown RBP19.48■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Rpap1Q80TE0 1409 aa19.48■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Pibf1E9Q6K3 756 aa19.47■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Srcin1Q9QWI6 1250 aa19.47■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Slc4a1apE9PX68 744 aa19.46■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Ddrgk1Q80WW9 315 aa19.46■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Spag9Q58A65 1321 aaKnown RBP19.46■□□□□ 0.71
Ubr2-201ENSMUST00000113335 Trim30aP15533 496 aa19.45■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Arid3cA6PWV5 409 aa19.45■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Sox12Q04890 314 aa19.45■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Fmn1Q05860 1466 aa19.44■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Ccdc146E9Q9F7 977 aa19.44■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Becn1O88597 448 aa19.43■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Nup155Q99P88 1391 aaKnown RBP19.43■□□□□ 0.7
Ubr2-201ENSMUST00000113335 VgfQ0VGU4 617 aa19.42■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Mical1Q8VDP3 1048 aa19.41■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Ppp1r18Q8BQ30 594 aa19.41■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Ylpm1Q9R0I7 1386 aaKnown RBP19.41■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Atp6v1dP57746 247 aa19.4■□□□□ 0.7
Ubr2-201ENSMUST00000113335 AknaQ80VW7 1404 aa19.39■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Psme1P97371 249 aa19.39■□□□□ 0.7
Ubr2-201ENSMUST00000113335 Rsph3aQ3UFY4 516 aa19.39■□□□□ 0.69
Ubr2-201ENSMUST00000113335 Smg6P61406 1418 aaKnown RBP19.39■□□□□ 0.69
Ubr2-201ENSMUST00000113335 Kdm5dQ62240 1548 aa19.38■□□□□ 0.69
Ubr2-201ENSMUST00000113335 Chmp3Q9CQ10 224 aa19.38■□□□□ 0.69
Ubr2-201ENSMUST00000113335 SetQ9EQU5 289 aaKnown RBP19.37■□□□□ 0.69
Ubr2-201ENSMUST00000113335 Lemd3Q9WU40 921 aa19.37■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 9 ms