RNA–Protein interactions for RNA: ENSMUST00000113055.8

Shroom3-203, Transcript of Protein Shroom3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shroom3, Length 6,765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-203ENSMUST00000113055 SafbD3YXK2 937 aaKnown RBP18.93■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Sart3Q9JLI8 962 aaKnown RBP18.93■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Tmco5bQ80X59 307 aa18.93■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Ppp1r18Q8BQ30 594 aa18.93■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Speer4f1Q9D5Q6 258 aa18.92■□□□□ 0.62
Shroom3-203ENSMUST00000113055 MsnP26041 577 aaKnown RBP18.92■□□□□ 0.62
Shroom3-203ENSMUST00000113055 MecomP14404 1042 aa18.91■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Tpm3-rs7D3Z2H9 248 aa18.91■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Irx3P81067 507 aa18.89■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Q3TQI7 289 aaKnown RBP18.89■□□□□ 0.61
Shroom3-203ENSMUST00000113055 CrebrfQ8CDG5 640 aaKnown RBP18.89■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Sox12Q04890 314 aa18.89■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Znf330Q922H9 316 aa18.89■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Dnai2A2AC93 623 aa18.88■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Cluap1Q8R3P7 413 aa18.87■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Mbd3Q9Z2D8 285 aaKnown RBP18.86■□□□□ 0.61
Shroom3-203ENSMUST00000113055 AU015836B2RUM3 263 aa18.86■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Rb1cc1Q9ESK9 1588 aa18.86■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Birc3O08863 600 aa18.86■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Slc4a1apE9PX68 744 aa18.86■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Eea1Q8BL66 1411 aa18.85■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Supt16hQ920B9 1047 aa18.85■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Chmp5Q9D7S9 219 aa18.83■□□□□ 0.61
Shroom3-203ENSMUST00000113055 BccipQ9CWI3 316 aa18.83■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Mfap1aC0HKD8 439 aaKnown RBP18.82■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Mfap1bC0HKD9 439 aaKnown RBP18.82■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Chmp3Q9CQ10 224 aa18.82■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Vps53Q8CCB4 832 aa18.82■□□□□ 0.6
Shroom3-203ENSMUST00000113055 U2af1Q9D883 239 aaKnown RBP18.82■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Gpatch11Q3UFS4 262 aa18.81■□□□□ 0.6
Shroom3-203ENSMUST00000113055 PtmsQ9D0J8 101 aaKnown RBP18.81■□□□□ 0.6
Shroom3-203ENSMUST00000113055 SetQ9EQU5 289 aaKnown RBP18.81■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Brpf1B2RRD7 1212 aa18.8■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Fhad1A6PWD2 1420 aa18.8■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Dnai1Q8C0M8 701 aa18.8■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Rsf1E9PWW9 1441 aaKnown RBP18.8■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Kiaa0754Q69ZZ9 979 aa18.8■□□□□ 0.6
Shroom3-203ENSMUST00000113055 GorabQ8BRM2 368 aa18.79■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Rundc1Q0VDN7 615 aa18.79■□□□□ 0.6
Shroom3-203ENSMUST00000113055 R3hcc1Q8BSI6 488 aa18.79■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Pde3bQ61409 1100 aa18.79■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Ifit1bl1D3Z6F0 470 aa18.78■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Ubap1lG3UW59 384 aa18.78■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Hspa5P20029 655 aaKnown RBP18.78■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Cald1E9QA15 768 aaKnown RBP18.78■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Ccdc18Q640L5 1455 aa18.77■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Psme1P97371 249 aa18.77■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Gtf2e1Q9D0D5 440 aa18.77■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Abcc8B2RUS7 1588 aa18.77■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Pibf1E9Q6K3 756 aa18.77■□□□□ 0.59
Shroom3-203ENSMUST00000113055 EspnQ9ET47 871 aa18.76■□□□□ 0.59
Shroom3-203ENSMUST00000113055 RdxP26043 583 aaKnown RBP18.76■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Ppm1fQ8CGA0 452 aa18.75■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Tcerg1Q8CGF7 1100 aaKnown RBP18.74■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Map4P27546 1125 aaKnown RBP18.73■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Tmf1B9EKI3 1091 aa18.72■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Bcl11aQ9QYE3 773 aa18.72■□□□□ 0.59
Shroom3-203ENSMUST00000113055 MlecQ6ZQI3 291 aaKnown RBP18.72■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Spag9Q58A65 1321 aaKnown RBP18.72■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Arid3cA6PWV5 409 aa18.72■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Arid4aF8VPQ2 1261 aaKnown RBP18.7■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Dcaf11Q91VU6 549 aa18.7■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Golga2Q921M4 999 aa18.7■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Tpd52l1O54818 204 aa18.7■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Tpm3P21107 285 aaKnown RBP18.7■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Exoc6Q8R313 802 aa18.69■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Txndc2Q6P902 515 aa18.69■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Ipo8Q7TMY7 1010 aa18.68■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Ccer1Q9CQL2 403 aa18.68■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Mia2Q91ZV0 1396 aa18.68■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Ftsj3Q9DBE9 838 aaKnown RBP18.67■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Smarce1O54941 411 aaKnown RBP18.67■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Taok2Q6ZQ29 1240 aa18.67■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Tomm22Q9CPQ3 142 aa18.67■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Podxl2Q8CAE9 603 aa18.66■□□□□ 0.58
Shroom3-203ENSMUST00000113055 HdgfP51859 237 aaKnown RBP18.66■□□□□ 0.58
Shroom3-203ENSMUST00000113055 SlkO54988 1233 aa18.66■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Ercc6F8VPZ5 1481 aa18.66■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Pkd2O35245 966 aa18.65■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Kri1Q8VDQ9 704 aaKnown RBP18.64■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Trim30aP15533 496 aa18.64■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Sin3aQ60520 1274 aaKnown RBP18.62■□□□□ 0.57
Shroom3-203ENSMUST00000113055 CrbnQ8C7D2 445 aa18.62■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Ksr2Q3UVC0 959 aa18.62■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Slc4a10Q5DTL9 1118 aa18.62■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Ncbp3Q8BZR9 615 aaKnown RBP18.61■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Rrp12Q6P5B0 1295 aaKnown RBP18.61■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Pak3Q61036 559 aa18.61■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Zscan21Q07231 555 aa18.6■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Ipo9Q91YE6 1041 aa18.59■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Becn1O88597 448 aa18.58■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Ccdc47Q9D024 483 aaKnown RBP18.58■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Ccdc146E9Q9F7 977 aa18.58■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Trak1Q6PD31 939 aa18.57■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Krt82Q99M74 516 aa18.56■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Golga3P55937 1487 aa18.56■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Gm21969J3QJZ1 289 aa18.56■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Fam193aQ8CGI1 1231 aaKnown RBP18.56■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Drc7Q6V3W6 876 aa18.55■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Ciz1Q8VEH2 845 aa18.55■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 88.2 ms