RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Calr4Q3TQS0 420 aa14.66□□□□□ -0.06
Chd3-202ENSMUST00000108661 Trak1Q6PD31 939 aa14.66□□□□□ -0.06
Chd3-202ENSMUST00000108661 Fhad1A6PWD2 1420 aa14.66□□□□□ -0.06
Chd3-202ENSMUST00000108661 Sh3bp5Q9Z131 463 aa14.66□□□□□ -0.06
Chd3-202ENSMUST00000108661 Sart1Q9Z315 806 aaKnown RBP14.65□□□□□ -0.06
Chd3-202ENSMUST00000108661 Ofd1Q80Z25 1017 aa14.64□□□□□ -0.07
Chd3-202ENSMUST00000108661 Cabp1Q9JLK7 227 aa14.64□□□□□ -0.07
Chd3-202ENSMUST00000108661 Smarca4Q3TKT4 1613 aaKnown RBP14.64□□□□□ -0.07
Chd3-202ENSMUST00000108661 Cecr2E9Q2Z1 1453 aa14.64□□□□□ -0.07
Chd3-202ENSMUST00000108661 PnnO35691 725 aaKnown RBP14.63□□□□□ -0.07
Chd3-202ENSMUST00000108661 Q3TQI7 289 aaKnown RBP14.63□□□□□ -0.07
Chd3-202ENSMUST00000108661 Utp14aQ640M1 767 aaKnown RBP14.63□□□□□ -0.07
Chd3-202ENSMUST00000108661 Pkd2O35245 966 aa14.63□□□□□ -0.07
Chd3-202ENSMUST00000108661 Trim44Q9QXA7 346 aa14.62□□□□□ -0.07
Chd3-202ENSMUST00000108661 Nup155Q99P88 1391 aaKnown RBP14.61□□□□□ -0.07
Chd3-202ENSMUST00000108661 Sall2Q9QX96 1004 aa14.61□□□□□ -0.07
Chd3-202ENSMUST00000108661 Fyco1Q8VDC1 1437 aa14.61□□□□□ -0.07
Chd3-202ENSMUST00000108661 Rundc1Q0VDN7 615 aa14.6□□□□□ -0.07
Chd3-202ENSMUST00000108661 Atf3Q60765 181 aa14.6□□□□□ -0.07
Chd3-202ENSMUST00000108661 Spag9Q58A65 1321 aaKnown RBP14.6□□□□□ -0.07
Chd3-202ENSMUST00000108661 LrpprcQ6PB66 1392 aaKnown RBP14.59□□□□□ -0.07
Chd3-202ENSMUST00000108661 Dhx29Q6PGC1 1365 aaKnown RBP14.59□□□□□ -0.07
Chd3-202ENSMUST00000108661 Trim30dE9PWL0 497 aa14.58□□□□□ -0.07
Chd3-202ENSMUST00000108661 Armcx1Q9CX83 456 aa14.58□□□□□ -0.07
Chd3-202ENSMUST00000108661 Plekhh2Q8C115 1491 aa14.58□□□□□ -0.08
Chd3-202ENSMUST00000108661 Hsp90b1P08113 802 aaKnown RBP14.57□□□□□ -0.08
Chd3-202ENSMUST00000108661 Hsp90ab1P11499 724 aaKnown RBP14.57□□□□□ -0.08
Chd3-202ENSMUST00000108661 Tmf1B9EKI3 1091 aa14.57□□□□□ -0.08
Chd3-202ENSMUST00000108661 CenpjQ569L8 1344 aa14.56□□□□□ -0.08
Chd3-202ENSMUST00000108661 Rassf8Q8CJ96 419 aa14.55□□□□□ -0.08
Chd3-202ENSMUST00000108661 Cabp4Q8VHC5 271 aa14.55□□□□□ -0.08
Chd3-202ENSMUST00000108661 WrnO09053 1401 aa14.55□□□□□ -0.08
Chd3-202ENSMUST00000108661 CntlnA2AM05 1397 aa14.55□□□□□ -0.08
Chd3-202ENSMUST00000108661 Sf3b2Q3UJB0 878 aaKnown RBP14.54□□□□□ -0.08
Chd3-202ENSMUST00000108661 Shq1Q7TMX5 569 aa14.54□□□□□ -0.08
Chd3-202ENSMUST00000108661 U2af1Q9D883 239 aaKnown RBP14.54□□□□□ -0.08
Chd3-202ENSMUST00000108661 Fan1Q69ZT1 1020 aa14.53□□□□□ -0.08
Chd3-202ENSMUST00000108661 PtmaP26350 111 aa14.53□□□□□ -0.08
Chd3-202ENSMUST00000108661 Sirt1Q923E4 737 aa14.53□□□□□ -0.08
Chd3-202ENSMUST00000108661 Dnai2A2AC93 623 aa14.53□□□□□ -0.08
Chd3-202ENSMUST00000108661 Chmp3Q9CQ10 224 aa14.53□□□□□ -0.08
Chd3-202ENSMUST00000108661 Carmil1Q6EDY6 1374 aa14.52□□□□□ -0.08
Chd3-202ENSMUST00000108661 Fyb1O35601 819 aa14.52□□□□□ -0.08
Chd3-202ENSMUST00000108661 Jph4Q80WT0 628 aa14.52□□□□□ -0.09
Chd3-202ENSMUST00000108661 Dcaf11Q91VU6 549 aa14.52□□□□□ -0.09
Chd3-202ENSMUST00000108661 Sart3Q9JLI8 962 aaKnown RBP14.51□□□□□ -0.09
Chd3-202ENSMUST00000108661 Cep162Q6ZQ06 1403 aa14.51□□□□□ -0.09
Chd3-202ENSMUST00000108661 CftrP26361 1476 aa14.51□□□□□ -0.09
Chd3-202ENSMUST00000108661 Ncoa2Q61026 1462 aa14.51□□□□□ -0.09
Chd3-202ENSMUST00000108661 Rock2P70336 1388 aa14.5□□□□□ -0.09
Chd3-202ENSMUST00000108661 Spryd3E9Q9B3 442 aa14.5□□□□□ -0.09
Chd3-202ENSMUST00000108661 Mphosph9A6H5Y1 991 aa14.5□□□□□ -0.09
Chd3-202ENSMUST00000108661 Iqgap2Q3UQ44 1575 aa14.5□□□□□ -0.09
Chd3-202ENSMUST00000108661 Wdr43Q6ZQL4 677 aaKnown RBP14.49□□□□□ -0.09
Chd3-202ENSMUST00000108661 Arhgap35Q91YM2 1499 aa14.49□□□□□ -0.09
Chd3-202ENSMUST00000108661 Hspa5P20029 655 aaKnown RBP14.49□□□□□ -0.09
Chd3-202ENSMUST00000108661 Senp3Q9EP97 568 aaKnown RBP14.49□□□□□ -0.09
Chd3-202ENSMUST00000108661 Map7O88735 730 aa14.49□□□□□ -0.09
Chd3-202ENSMUST00000108661 Anks4bQ8K3X6 423 aa14.48□□□□□ -0.09
Chd3-202ENSMUST00000108661 CanxP35564 591 aaKnown RBP14.48□□□□□ -0.09
Chd3-202ENSMUST00000108661 Synj1Q8CHC4 1574 aa14.48□□□□□ -0.09
Chd3-202ENSMUST00000108661 HnrnpuQ8VEK3 800 aaKnown RBP14.47□□□□□ -0.09
Chd3-202ENSMUST00000108661 Urb2E9Q7L1 1524 aaKnown RBP14.47□□□□□ -0.09
Chd3-202ENSMUST00000108661 Srcin1Q9QWI6 1250 aa14.47□□□□□ -0.09
Chd3-202ENSMUST00000108661 Cttnbp2B9EJA2 1648 aa14.46□□□□□ -0.09
Chd3-202ENSMUST00000108661 Ccdc88bQ4QRL3 1481 aa14.46□□□□□ -0.1
Chd3-202ENSMUST00000108661 Dbr1Q923B1 550 aa14.45□□□□□ -0.1
Chd3-202ENSMUST00000108661 Pibf1E9Q6K3 756 aa14.45□□□□□ -0.1
Chd3-202ENSMUST00000108661 Anapc15P60007 132 aa14.45□□□□□ -0.1
Chd3-202ENSMUST00000108661 Tmco5bQ80X59 307 aa14.44□□□□□ -0.1
Chd3-202ENSMUST00000108661 Plcb2A3KGF7 1181 aa14.44□□□□□ -0.1
Chd3-202ENSMUST00000108661 Evi5lH3BKQ3 813 aa14.44□□□□□ -0.1
Chd3-202ENSMUST00000108661 MccE9PWI3 1003 aa14.44□□□□□ -0.1
Chd3-202ENSMUST00000108661 Tomm22Q9CPQ3 142 aa14.43□□□□□ -0.1
Chd3-202ENSMUST00000108661 Gm21190A0A0G2JGJ6 266 aa14.43□□□□□ -0.1
Chd3-202ENSMUST00000108661 Stard8Q8K031 1019 aa14.43□□□□□ -0.1
Chd3-202ENSMUST00000108661 Ccnb3Q810T2 1396 aa14.43□□□□□ -0.1
Chd3-202ENSMUST00000108661 Fam71e1A1L3C1 212 aa14.43□□□□□ -0.1
Chd3-202ENSMUST00000108661 Zpr1Q62384 459 aa14.42□□□□□ -0.1
Chd3-202ENSMUST00000108661 Speer4f1Q9D5Q6 258 aa14.42□□□□□ -0.1
Chd3-202ENSMUST00000108661 Crybg2B7ZCC2 1516 aa14.42□□□□□ -0.1
Chd3-202ENSMUST00000108661 Kcnn1Q9EQR3 537 aa14.42□□□□□ -0.1
Chd3-202ENSMUST00000108661 Cc2d2bA0A286YDU8 1405 aa14.41□□□□□ -0.1
Chd3-202ENSMUST00000108661 Chmp7Q8R1T1 451 aa14.41□□□□□ -0.1
Chd3-202ENSMUST00000108661 Pde3bQ61409 1100 aa14.4□□□□□ -0.1
Chd3-202ENSMUST00000108661 Mink1Q9JM52 1308 aa14.4□□□□□ -0.1
Chd3-202ENSMUST00000108661 Ddx54Q8K4L0 874 aaKnown RBP14.4□□□□□ -0.1
Chd3-202ENSMUST00000108661 Sugp2Q8CH09 1067 aa14.4□□□□□ -0.1
Chd3-202ENSMUST00000108661 Stk31Q99MW1 1018 aa14.38□□□□□ -0.11
Chd3-202ENSMUST00000108661 Dmrt2Q8BG36 561 aa14.38□□□□□ -0.11
Chd3-202ENSMUST00000108661 Golga2Q921M4 999 aa14.38□□□□□ -0.11
Chd3-202ENSMUST00000108661 MecomP14404 1042 aa14.37□□□□□ -0.11
Chd3-202ENSMUST00000108661 Smarca2Q6DIC0 1577 aa14.37□□□□□ -0.11
Chd3-202ENSMUST00000108661 Rab11fip3Q8CHD8 1047 aa14.37□□□□□ -0.11
Chd3-202ENSMUST00000108661 KnstrnQ9D9Z1 312 aaKnown RBP14.36□□□□□ -0.11
Chd3-202ENSMUST00000108661 Ccar1Q8CH18 1146 aaKnown RBP14.36□□□□□ -0.11
Chd3-202ENSMUST00000108661 Rwdd1Q9CQK7 243 aa14.34□□□□□ -0.11
Chd3-202ENSMUST00000108661 Usp40Q8BWR4 1235 aa14.34□□□□□ -0.11
Chd3-202ENSMUST00000108661 Vps53Q8CCB4 832 aa14.34□□□□□ -0.11
Chd3-202ENSMUST00000108661 ErbinQ80TH2 1402 aa14.33□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms