RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 Ankrd36D3Z4K0 1415 aa20.48■□□□□ 0.87
Sptbn4-204ENSMUST00000108364 Map4P27546 1125 aaKnown RBP20.48■□□□□ 0.87
Sptbn4-204ENSMUST00000108364 Ythdc1E9Q5K9 736 aaKnown RBP20.46■□□□□ 0.87
Sptbn4-204ENSMUST00000108364 Speer4f1Q9D5Q6 258 aa20.46■□□□□ 0.87
Sptbn4-204ENSMUST00000108364 Dnttip2Q8R2M2 758 aaKnown RBP20.45■□□□□ 0.86
Sptbn4-204ENSMUST00000108364 Fhad1A6PWD2 1420 aa20.45■□□□□ 0.86
Sptbn4-204ENSMUST00000108364 Rpap1Q80TE0 1409 aa20.45■□□□□ 0.86
Sptbn4-204ENSMUST00000108364 Pds5bQ4VA53 1446 aaKnown RBP20.44■□□□□ 0.86
Sptbn4-204ENSMUST00000108364 Arap1Q4LDD4 1452 aa20.44■□□□□ 0.86
Sptbn4-204ENSMUST00000108364 Gm20521D3Z5F7 333 aa20.43■□□□□ 0.86
Sptbn4-204ENSMUST00000108364 Washc2Q6PGL7 1334 aa20.41■□□□□ 0.86
Sptbn4-204ENSMUST00000108364 Slc4a2P13808 1237 aaKnown RBP20.41■□□□□ 0.86
Sptbn4-204ENSMUST00000108364 UacaQ8CGB3 1411 aa20.4■□□□□ 0.86
Sptbn4-204ENSMUST00000108364 CrbnQ8C7D2 445 aa20.4■□□□□ 0.86
Sptbn4-204ENSMUST00000108364 Lmod3E9QA62 571 aa20.39■□□□□ 0.85
Sptbn4-204ENSMUST00000108364 Srpk2O54781 681 aaKnown RBP20.39■□□□□ 0.85
Sptbn4-204ENSMUST00000108364 Ipo8Q7TMY7 1010 aa20.38■□□□□ 0.85
Sptbn4-204ENSMUST00000108364 Naip1Q9QWK5 1403 aa20.38■□□□□ 0.85
Sptbn4-204ENSMUST00000108364 PtmaP26350 111 aa20.37■□□□□ 0.85
Sptbn4-204ENSMUST00000108364 Ifit1bl1D3Z6F0 470 aa20.37■□□□□ 0.85
Sptbn4-204ENSMUST00000108364 Tmf1B9EKI3 1091 aa20.35■□□□□ 0.85
Sptbn4-204ENSMUST00000108364 Fgd1P52734 960 aa20.33■□□□□ 0.85
Sptbn4-204ENSMUST00000108364 Vps8Q0P5W1 1427 aa20.32■□□□□ 0.84
Sptbn4-204ENSMUST00000108364 Map7O88735 730 aa20.32■□□□□ 0.84
Sptbn4-204ENSMUST00000108364 Cnga1P29974 684 aa20.32■□□□□ 0.84
Sptbn4-204ENSMUST00000108364 Sart3Q9JLI8 962 aaKnown RBP20.32■□□□□ 0.84
Sptbn4-204ENSMUST00000108364 Mapk8ip3Q9ESN9 1337 aa20.32■□□□□ 0.84
Sptbn4-204ENSMUST00000108364 Plekhh2Q8C115 1491 aa20.31■□□□□ 0.84
Sptbn4-204ENSMUST00000108364 Cux2P70298 1426 aa20.3■□□□□ 0.84
Sptbn4-204ENSMUST00000108364 Arhgef5E9Q7D5 1581 aa20.29■□□□□ 0.84
Sptbn4-204ENSMUST00000108364 Gm6268A2A3U9 297 aa20.27■□□□□ 0.84
Sptbn4-204ENSMUST00000108364 PnisrA2AJT4 805 aaKnown RBP20.27■□□□□ 0.84
Sptbn4-204ENSMUST00000108364 Plcd4Q8K3R3 807 aa20.26■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Stk24Q99KH8 431 aa20.26■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Dapk1Q80YE7 1442 aa20.26■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Atad2bE9Q166 1460 aaKnown RBP20.26■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Shroom4Q1W617 1475 aa20.26■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Nup155Q99P88 1391 aaKnown RBP20.26■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Rock2P70336 1388 aa20.25■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 NudcO35685 332 aaKnown RBP20.23■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Mre11Q61216 706 aa20.23■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Golga2Q921M4 999 aa20.23■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Top2bQ64511 1612 aa20.23■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Pank3Q8R2W9 370 aa20.23■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 IqubQ8CDK3 788 aa20.23■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Cluap1Q8R3P7 413 aa20.22■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Kcnh8P59111 1102 aa20.22■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Exosc9Q9JHI7 438 aaKnown RBP20.22■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Rpgrip1lQ8CG73 1264 aa20.21■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Slc4a1apE9PX68 744 aa20.21■□□□□ 0.83
Sptbn4-204ENSMUST00000108364 Dcaf11Q91VU6 549 aa20.2■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Prkrip1Q9CWV6 186 aaKnown RBP20.19■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Mfap1aC0HKD8 439 aaKnown RBP20.19■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Mfap1bC0HKD9 439 aaKnown RBP20.19■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Inpp5dQ9ES52 1191 aa20.19■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Iqgap2Q3UQ44 1575 aa20.18■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Esx1O88933 382 aa20.18■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 KnstrnQ9D9Z1 312 aaKnown RBP20.18■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Zfp644E9QA22 1323 aa20.18■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Dhx29Q6PGC1 1365 aaKnown RBP20.18■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Ttll13A4Q9F6 804 aa20.17■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Stag3O70576 1240 aa20.17■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 PtprkP35822 1457 aa20.17■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Tiam1Q60610 1591 aa20.17■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Eif2s2Q99L45 331 aaKnown RBP20.17■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Srcin1Q9QWI6 1250 aa20.16■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Rock1P70335 1354 aa20.16■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 LrpprcQ6PB66 1392 aaKnown RBP20.15■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Gtf2e1Q9D0D5 440 aa20.14■□□□□ 0.82
Sptbn4-204ENSMUST00000108364 Erich6bQ9D4S6 220 aa20.14■□□□□ 0.81
Sptbn4-204ENSMUST00000108364 Iqcf3Q9D498 203 aa20.12■□□□□ 0.81
Sptbn4-204ENSMUST00000108364 Taok2Q6ZQ29 1240 aa20.12■□□□□ 0.81
Sptbn4-204ENSMUST00000108364 Ak7Q9D2H2 614 aa20.12■□□□□ 0.81
Sptbn4-204ENSMUST00000108364 Cux1P53564 1515 aa20.11■□□□□ 0.81
Sptbn4-204ENSMUST00000108364 U2af1Q9D883 239 aaKnown RBP20.09■□□□□ 0.81
Sptbn4-204ENSMUST00000108364 Pknox2Q8BG99 474 aa20.09■□□□□ 0.81
Sptbn4-204ENSMUST00000108364 Zfp444Q3TDV8 331 aaKnown RBP20.08■□□□□ 0.81
Sptbn4-204ENSMUST00000108364 Map3k1P53349 1493 aa20.08■□□□□ 0.81
Sptbn4-204ENSMUST00000108364 Znf330Q922H9 316 aa20.08■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 Chmp4bQ9D8B3 224 aaKnown RBP20.08■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 SlkO54988 1233 aa20.07■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 Ksr2Q3UVC0 959 aa20.07■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 Q7TT23 1179 aa20.07■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 NrkQ9R0G8 1455 aa20.06■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 Ecm2Q5FW85 670 aa20.06■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 Zscan10Q3URR7 782 aa20.05■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 Rrp12Q6P5B0 1295 aaKnown RBP20.04■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 L3mbtl2P59178 703 aa20.03■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 Tmco5bQ80X59 307 aa20.03■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 CatipB9EKE5 520 aa20.03■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 1700019A02RikA0A087WPV9 146 aa20.02■□□□□ 0.8
Sptbn4-204ENSMUST00000108364 GorabQ8BRM2 368 aa20.01■□□□□ 0.79
Sptbn4-204ENSMUST00000108364 4933402E13RikQ9D4D2 429 aa20.01■□□□□ 0.79
Sptbn4-204ENSMUST00000108364 Ift140E9PY46 1464 aa20.01■□□□□ 0.79
Sptbn4-204ENSMUST00000108364 Dhx57Q6P5D3 1388 aaKnown RBP20■□□□□ 0.79
Sptbn4-204ENSMUST00000108364 Casc1Q6TDU8 730 aa19.99■□□□□ 0.79
Sptbn4-204ENSMUST00000108364 Mroh2bQ7M6Y6 1581 aa19.99■□□□□ 0.79
Sptbn4-204ENSMUST00000108364 Efcab5A0JP43 1406 aa19.99■□□□□ 0.79
Sptbn4-204ENSMUST00000108364 TchhA0A0B4J1F9 1599 aa19.99■□□□□ 0.79
Sptbn4-204ENSMUST00000108364 Phldb1Q6PDH0 1371 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms