RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Map7O88735 730 aa20.28■□□□□ 0.84
Clcn3-203ENSMUST00000093490 Lmod3E9QA62 571 aa20.28■□□□□ 0.84
Clcn3-203ENSMUST00000093490 Stard8Q8K031 1019 aa20.28■□□□□ 0.84
Clcn3-203ENSMUST00000093490 WrnO09053 1401 aa20.27■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Irx6Q9ER75 438 aa20.26■□□□□ 0.83
Clcn3-203ENSMUST00000093490 UacaQ8CGB3 1411 aa20.26■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Plcb2A3KGF7 1181 aa20.25■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Mphosph9A6H5Y1 991 aa20.25■□□□□ 0.83
Clcn3-203ENSMUST00000093490 HdgfP51859 237 aaKnown RBP20.25■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Trak1Q6PD31 939 aa20.25■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Kif3bQ61771 747 aa20.24■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Eif4g2Q62448 906 aaKnown RBP20.24■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Ifit1bl1D3Z6F0 470 aa20.23■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Rundc1Q0VDN7 615 aa20.22■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Hspa5P20029 655 aaKnown RBP20.22■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Txndc2Q6P902 515 aa20.22■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Rapgef2Q8CHG7 1496 aa20.21■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Tmf1B9EKI3 1091 aa20.21■□□□□ 0.83
Clcn3-203ENSMUST00000093490 Soga1E1U8D0 1418 aa20.21■□□□□ 0.83
Clcn3-203ENSMUST00000093490 MlecQ6ZQI3 291 aaKnown RBP20.2■□□□□ 0.82
Clcn3-203ENSMUST00000093490 Sart1Q9Z315 806 aaKnown RBP20.19■□□□□ 0.82
Clcn3-203ENSMUST00000093490 Polr1aO35134 1717 aaKnown RBP20.18■□□□□ 0.82
Clcn3-203ENSMUST00000093490 Efcab5A0JP43 1406 aa20.17■□□□□ 0.82
Clcn3-203ENSMUST00000093490 Ccnb3Q810T2 1396 aa20.17■□□□□ 0.82
Clcn3-203ENSMUST00000093490 Tcerg1Q8CGF7 1100 aaKnown RBP20.16■□□□□ 0.82
Clcn3-203ENSMUST00000093490 Apbb1Q9QXJ1 710 aa20.16■□□□□ 0.82
Clcn3-203ENSMUST00000093490 Irx3P81067 507 aa20.16■□□□□ 0.82
Clcn3-203ENSMUST00000093490 Cnga1P29974 684 aa20.16■□□□□ 0.82
Clcn3-203ENSMUST00000093490 Znf326O88291 580 aa20.15■□□□□ 0.82
Clcn3-203ENSMUST00000093490 Bcl11aQ9QYE3 773 aa20.14■□□□□ 0.82
Clcn3-203ENSMUST00000093490 Neurod2Q62414 383 aa20.14■□□□□ 0.81
Clcn3-203ENSMUST00000093490 Rtf1A2AQ19 715 aaKnown RBP20.14■□□□□ 0.81
Clcn3-203ENSMUST00000093490 Stk26Q99JT2 416 aa20.13■□□□□ 0.81
Clcn3-203ENSMUST00000093490 Jph4Q80WT0 628 aa20.13■□□□□ 0.81
Clcn3-203ENSMUST00000093490 Gm6268A2A3U9 297 aa20.12■□□□□ 0.81
Clcn3-203ENSMUST00000093490 Adam1bQ8R534 806 aa20.12■□□□□ 0.81
Clcn3-203ENSMUST00000093490 SafbD3YXK2 937 aaKnown RBP20.11■□□□□ 0.81
Clcn3-203ENSMUST00000093490 Rwdd1Q9CQK7 243 aa20.11■□□□□ 0.81
Clcn3-203ENSMUST00000093490 Rock2P70336 1388 aa20.11■□□□□ 0.81
Clcn3-203ENSMUST00000093490 Ggt6Q6PDE7 497 aa20.1■□□□□ 0.81
Clcn3-203ENSMUST00000093490 KnstrnQ9D9Z1 312 aaKnown RBP20.09■□□□□ 0.81
Clcn3-203ENSMUST00000093490 CenpjQ569L8 1344 aa20.08■□□□□ 0.81
Clcn3-203ENSMUST00000093490 Dbr1Q923B1 550 aa20.07■□□□□ 0.8
Clcn3-203ENSMUST00000093490 Cux1P53564 1515 aa20.07■□□□□ 0.8
Clcn3-203ENSMUST00000093490 HnrnpuQ8VEK3 800 aaKnown RBP20.06■□□□□ 0.8
Clcn3-203ENSMUST00000093490 Srcin1Q9QWI6 1250 aa20.05■□□□□ 0.8
Clcn3-203ENSMUST00000093490 Shroom4Q1W617 1475 aa20.03■□□□□ 0.8
Clcn3-203ENSMUST00000093490 Ipo9Q91YE6 1041 aa20.03■□□□□ 0.8
Clcn3-203ENSMUST00000093490 AU015836B2RUM3 263 aa20.03■□□□□ 0.8
Clcn3-203ENSMUST00000093490 B4galnt3Q6L8S8 986 aa20.03■□□□□ 0.8
Clcn3-203ENSMUST00000093490 Cc2d2bA0A286YDU8 1405 aa20.02■□□□□ 0.8
Clcn3-203ENSMUST00000093490 Casc1Q6TDU8 730 aa20.02■□□□□ 0.8
Clcn3-203ENSMUST00000093490 Supt16hQ920B9 1047 aa20.02■□□□□ 0.8
Clcn3-203ENSMUST00000093490 Spag9Q58A65 1321 aaKnown RBP20.02■□□□□ 0.79
Clcn3-203ENSMUST00000093490 Wwc2Q6NXJ0 1187 aa20.01■□□□□ 0.79
Clcn3-203ENSMUST00000093490 1700019A02RikA0A087WPV9 146 aa20■□□□□ 0.79
Clcn3-203ENSMUST00000093490 Urb2E9Q7L1 1524 aaKnown RBP20■□□□□ 0.79
Clcn3-203ENSMUST00000093490 PtmsQ9D0J8 101 aaKnown RBP19.99■□□□□ 0.79
Clcn3-203ENSMUST00000093490 Pde3bQ61409 1100 aa19.98■□□□□ 0.79
Clcn3-203ENSMUST00000093490 EspnQ9ET47 871 aa19.98■□□□□ 0.79
Clcn3-203ENSMUST00000093490 Mrc2Q64449 1479 aa19.98■□□□□ 0.79
Clcn3-203ENSMUST00000093490 MccE9PWI3 1003 aa19.97■□□□□ 0.79
Clcn3-203ENSMUST00000093490 Dnai1Q8C0M8 701 aa19.97■□□□□ 0.79
Clcn3-203ENSMUST00000093490 Sart3Q9JLI8 962 aaKnown RBP19.96■□□□□ 0.79
Clcn3-203ENSMUST00000093490 Ap3b2Q9JME5 1082 aa19.96■□□□□ 0.79
Clcn3-203ENSMUST00000093490 Top2aQ01320 1528 aaKnown RBP19.96■□□□□ 0.79
Clcn3-203ENSMUST00000093490 Zscan21Q07231 555 aa19.95■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Armcx1Q9CX83 456 aa19.94■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Nsd2Q8BVE8 1365 aa19.94■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Exoc6Q8R313 802 aa19.94■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Rtn4Q99P72 1162 aaKnown RBP19.93■□□□□ 0.78
Clcn3-203ENSMUST00000093490 U2af1Q9D883 239 aaKnown RBP19.93■□□□□ 0.78
Clcn3-203ENSMUST00000093490 NrkQ9R0G8 1455 aa19.93■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Utp14aQ640M1 767 aaKnown RBP19.93■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Dcaf11Q91VU6 549 aa19.93■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Prdm16A2A935 1275 aa19.92■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Birc3O08863 600 aa19.91■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Chmp5Q9D7S9 219 aa19.91■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Dnttip2Q8R2M2 758 aaKnown RBP19.91■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Fgd6Q69ZL1 1399 aa19.9■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Mak16Q8BGS0 296 aaKnown RBP19.9■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Slc4a3P16283 1227 aa19.9■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Sox12Q04890 314 aa19.9■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Pes1Q9EQ61 584 aaKnown RBP19.9■□□□□ 0.78
Clcn3-203ENSMUST00000093490 Golga2Q921M4 999 aa19.89■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Duox2A2AQ99 1517 aa19.89■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Speer4f1Q9D5Q6 258 aa19.88■□□□□ 0.77
Clcn3-203ENSMUST00000093490 PnnO35691 725 aaKnown RBP19.88■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Hsp90b1P08113 802 aaKnown RBP19.88■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Nol10Q5RJG1 687 aaKnown RBP19.87■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Fan1Q69ZT1 1020 aa19.87■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Rab11fip3Q8CHD8 1047 aa19.87■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Spryd3E9Q9B3 442 aa19.86■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Q3TQI7 289 aaKnown RBP19.86■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Tdrd9Q14BI7 1383 aa19.85■□□□□ 0.77
Clcn3-203ENSMUST00000093490 U2surpQ6NV83 1029 aaKnown RBP19.85■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Ipo8Q7TMY7 1010 aa19.85■□□□□ 0.77
Clcn3-203ENSMUST00000093490 ErbinQ80TH2 1402 aa19.84■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Ift140E9PY46 1464 aa19.84■□□□□ 0.77
Clcn3-203ENSMUST00000093490 Usp47Q8BY87 1376 aa19.83■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms