RNA–Protein interactions for RNA: ENSMUST00000090806.4

Rai1-202, Transcript of Retinoic acid-induced protein 1, mousemouse

TSL 1 (best) BASIC

Gene Rai1, Length 7,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-202ENSMUST00000090806 Tpm3-rs7D3Z2H9 248 aa16.44■□□□□ 0.22
Rai1-202ENSMUST00000090806 Sart3Q9JLI8 962 aaKnown RBP16.43■□□□□ 0.22
Rai1-202ENSMUST00000090806 Ipo8Q7TMY7 1010 aa16.42■□□□□ 0.22
Rai1-202ENSMUST00000090806 Stk24Q99KH8 431 aa16.42■□□□□ 0.22
Rai1-202ENSMUST00000090806 R3hcc1Q8BSI6 488 aa16.42■□□□□ 0.22
Rai1-202ENSMUST00000090806 Eif4g2Q62448 906 aaKnown RBP16.41■□□□□ 0.22
Rai1-202ENSMUST00000090806 Rrp7aQ9D1C9 280 aaKnown RBP16.41■□□□□ 0.22
Rai1-202ENSMUST00000090806 CgnP59242 1191 aa16.4■□□□□ 0.22
Rai1-202ENSMUST00000090806 Iffo2Q8R2V2 512 aa16.4■□□□□ 0.22
Rai1-202ENSMUST00000090806 Fhad1A6PWD2 1420 aa16.4■□□□□ 0.22
Rai1-202ENSMUST00000090806 Map7d2A2AG50 781 aa16.4■□□□□ 0.22
Rai1-202ENSMUST00000090806 Ddrgk1Q80WW9 315 aa16.4■□□□□ 0.22
Rai1-202ENSMUST00000090806 Smarce1O54941 411 aaKnown RBP16.39■□□□□ 0.21
Rai1-202ENSMUST00000090806 Rtf1A2AQ19 715 aaKnown RBP16.39■□□□□ 0.21
Rai1-202ENSMUST00000090806 Speer4f1Q9D5Q6 258 aa16.38■□□□□ 0.21
Rai1-202ENSMUST00000090806 Cnga1P29974 684 aa16.38■□□□□ 0.21
Rai1-202ENSMUST00000090806 4933402E13RikQ9D4D2 429 aa16.37■□□□□ 0.21
Rai1-202ENSMUST00000090806 Taok2Q6ZQ29 1240 aa16.37■□□□□ 0.21
Rai1-202ENSMUST00000090806 Becn1O88597 448 aa16.36■□□□□ 0.21
Rai1-202ENSMUST00000090806 Arhgap27A2AB59 869 aa16.35■□□□□ 0.21
Rai1-202ENSMUST00000090806 Trim30aP15533 496 aa16.35■□□□□ 0.21
Rai1-202ENSMUST00000090806 Dnai2A2AC93 623 aa16.35■□□□□ 0.21
Rai1-202ENSMUST00000090806 U2surpQ6NV83 1029 aaKnown RBP16.34■□□□□ 0.21
Rai1-202ENSMUST00000090806 Mfap1aC0HKD8 439 aaKnown RBP16.34■□□□□ 0.21
Rai1-202ENSMUST00000090806 Mfap1bC0HKD9 439 aaKnown RBP16.34■□□□□ 0.21
Rai1-202ENSMUST00000090806 VgfQ0VGU4 617 aa16.33■□□□□ 0.2
Rai1-202ENSMUST00000090806 Gpatch11Q3UFS4 262 aa16.32■□□□□ 0.2
Rai1-202ENSMUST00000090806 MecomP14404 1042 aa16.32■□□□□ 0.2
Rai1-202ENSMUST00000090806 Ccdc18Q640L5 1455 aa16.32■□□□□ 0.2
Rai1-202ENSMUST00000090806 Golga3P55937 1487 aa16.31■□□□□ 0.2
Rai1-202ENSMUST00000090806 Cspp1B2RX88 1205 aa16.31■□□□□ 0.2
Rai1-202ENSMUST00000090806 Tmf1B9EKI3 1091 aa16.31■□□□□ 0.2
Rai1-202ENSMUST00000090806 Tpm3P21107 285 aaKnown RBP16.29■□□□□ 0.2
Rai1-202ENSMUST00000090806 SlkO54988 1233 aa16.28■□□□□ 0.2
Rai1-202ENSMUST00000090806 Rsf1E9PWW9 1441 aaKnown RBP16.28■□□□□ 0.2
Rai1-202ENSMUST00000090806 Rundc1Q0VDN7 615 aa16.28■□□□□ 0.2
Rai1-202ENSMUST00000090806 Nol10Q5RJG1 687 aaKnown RBP16.28■□□□□ 0.2
Rai1-202ENSMUST00000090806 Kif15Q6P9L6 1387 aa16.27■□□□□ 0.2
Rai1-202ENSMUST00000090806 Tmco5bQ80X59 307 aa16.27■□□□□ 0.19
Rai1-202ENSMUST00000090806 Zscan21Q07231 555 aa16.27■□□□□ 0.19
Rai1-202ENSMUST00000090806 Ftsj3Q9DBE9 838 aaKnown RBP16.27■□□□□ 0.19
Rai1-202ENSMUST00000090806 Hspa5P20029 655 aaKnown RBP16.26■□□□□ 0.19
Rai1-202ENSMUST00000090806 Atp6v1dP57746 247 aa16.26■□□□□ 0.19
Rai1-202ENSMUST00000090806 Exoc6Q8R313 802 aa16.26■□□□□ 0.19
Rai1-202ENSMUST00000090806 Gtf3c3Q3TMP1 882 aa16.25■□□□□ 0.19
Rai1-202ENSMUST00000090806 Cluap1Q8R3P7 413 aa16.25■□□□□ 0.19
Rai1-202ENSMUST00000090806 Ush1cQ9ES64 910 aa16.25■□□□□ 0.19
Rai1-202ENSMUST00000090806 CrebrfQ8CDG5 640 aaKnown RBP16.24■□□□□ 0.19
Rai1-202ENSMUST00000090806 Golga2Q921M4 999 aa16.24■□□□□ 0.19
Rai1-202ENSMUST00000090806 Q3TQI7 289 aaKnown RBP16.22■□□□□ 0.19
Rai1-202ENSMUST00000090806 GorabQ8BRM2 368 aa16.22■□□□□ 0.19
Rai1-202ENSMUST00000090806 U2af1Q9D883 239 aaKnown RBP16.21■□□□□ 0.19
Rai1-202ENSMUST00000090806 Gtf2e1Q9D0D5 440 aa16.21■□□□□ 0.19
Rai1-202ENSMUST00000090806 Rsph3aQ3UFY4 516 aa16.21■□□□□ 0.18
Rai1-202ENSMUST00000090806 Noc3lQ8VI84 807 aaKnown RBP16.2■□□□□ 0.18
Rai1-202ENSMUST00000090806 Tpd52l1O54818 204 aa16.2■□□□□ 0.18
Rai1-202ENSMUST00000090806 Plin1Q8CGN5 517 aa16.19■□□□□ 0.18
Rai1-202ENSMUST00000090806 MyclP10166 368 aa16.19■□□□□ 0.18
Rai1-202ENSMUST00000090806 Ccer1Q9CQL2 403 aa16.19■□□□□ 0.18
Rai1-202ENSMUST00000090806 Znf330Q922H9 316 aa16.19■□□□□ 0.18
Rai1-202ENSMUST00000090806 Spag9Q58A65 1321 aaKnown RBP16.18■□□□□ 0.18
Rai1-202ENSMUST00000090806 Sf3a1Q8K4Z5 791 aaKnown RBP16.17■□□□□ 0.18
Rai1-202ENSMUST00000090806 Pkd2O35245 966 aa16.17■□□□□ 0.18
Rai1-202ENSMUST00000090806 Brpf1B2RRD7 1212 aa16.16■□□□□ 0.18
Rai1-202ENSMUST00000090806 Mical1Q8VDP3 1048 aa16.15■□□□□ 0.18
Rai1-202ENSMUST00000090806 Ifit1bl1D3Z6F0 470 aa16.15■□□□□ 0.18
Rai1-202ENSMUST00000090806 Ccar1Q8CH18 1146 aaKnown RBP16.15■□□□□ 0.18
Rai1-202ENSMUST00000090806 Fbxo2Q80UW2 297 aa16.15■□□□□ 0.18
Rai1-202ENSMUST00000090806 Ccdc47Q9D024 483 aaKnown RBP16.15■□□□□ 0.18
Rai1-202ENSMUST00000090806 Map4P27546 1125 aaKnown RBP16.15■□□□□ 0.18
Rai1-202ENSMUST00000090806 Ylpm1Q9R0I7 1386 aaKnown RBP16.14■□□□□ 0.17
Rai1-202ENSMUST00000090806 ChgaP26339 463 aaKnown RBP16.14■□□□□ 0.17
Rai1-202ENSMUST00000090806 Tnnt1O88346 262 aa16.14■□□□□ 0.17
Rai1-202ENSMUST00000090806 Ccdc34Q3UI66 367 aa16.13■□□□□ 0.17
Rai1-202ENSMUST00000090806 Glipr1l2Q9CQ35 332 aa16.13■□□□□ 0.17
Rai1-202ENSMUST00000090806 Tpm1P58771 284 aa16.13■□□□□ 0.17
Rai1-202ENSMUST00000090806 Isy1Q69ZQ2 285 aaKnown RBP16.13■□□□□ 0.17
Rai1-202ENSMUST00000090806 Tpm4Q6IRU2 248 aa16.13■□□□□ 0.17
Rai1-202ENSMUST00000090806 Tpm2P58774 284 aa16.12■□□□□ 0.17
Rai1-202ENSMUST00000090806 Cgnl1Q6AW69 1298 aa16.12■□□□□ 0.17
Rai1-202ENSMUST00000090806 Taf3Q5HZG4 932 aa16.12■□□□□ 0.17
Rai1-202ENSMUST00000090806 Ercc6F8VPZ5 1481 aa16.11■□□□□ 0.17
Rai1-202ENSMUST00000090806 Dcaf11Q91VU6 549 aa16.11■□□□□ 0.17
Rai1-202ENSMUST00000090806 St18Q80TY4 1045 aa16.11■□□□□ 0.17
Rai1-202ENSMUST00000090806 Ksr2Q3UVC0 959 aa16.1■□□□□ 0.17
Rai1-202ENSMUST00000090806 Stk26Q99JT2 416 aa16.1■□□□□ 0.17
Rai1-202ENSMUST00000090806 Mre11Q61216 706 aa16.1■□□□□ 0.17
Rai1-202ENSMUST00000090806 CntlnA2AM05 1397 aa16.1■□□□□ 0.17
Rai1-202ENSMUST00000090806 CrbnQ8C7D2 445 aa16.09■□□□□ 0.17
Rai1-202ENSMUST00000090806 Rock2P70336 1388 aa16.09■□□□□ 0.17
Rai1-202ENSMUST00000090806 Birc3O08863 600 aa16.09■□□□□ 0.17
Rai1-202ENSMUST00000090806 Zrsr2Q62377 462 aaKnown RBP16.09■□□□□ 0.17
Rai1-202ENSMUST00000090806 Nap1l3Q794H2 544 aa16.09■□□□□ 0.17
Rai1-202ENSMUST00000090806 Baz1aO88379 1555 aa16.08■□□□□ 0.17
Rai1-202ENSMUST00000090806 Sin3aQ60520 1274 aaKnown RBP16.07■□□□□ 0.16
Rai1-202ENSMUST00000090806 Chmp3Q9CQ10 224 aa16.07■□□□□ 0.16
Rai1-202ENSMUST00000090806 Filip1lQ6P6L0 1131 aa16.07■□□□□ 0.16
Rai1-202ENSMUST00000090806 Tomm22Q9CPQ3 142 aa16.07■□□□□ 0.16
Rai1-202ENSMUST00000090806 Casq1O09165 405 aa16.07■□□□□ 0.16
Rai1-202ENSMUST00000090806 Gabpb2P81069 414 aa16.06■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms