RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Slx4Q6P1D7 1565 aa14.32□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Zbtb4Q5F293 982 aa14.32□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Neo1P97798 1493 aa14.32□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Pbrm1Q8BSQ9 1634 aaKnown RBP14.32□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Atp1b4Q99ME6 356 aa14.31□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Trak1Q6PD31 939 aa14.31□□□□□ -0.12
Ldb3-205ENSMUST00000090040 WizO88286 1684 aaKnown RBP14.31□□□□□ -0.12
Ldb3-205ENSMUST00000090040 4930567H17RikQ3V0K5 233 aa14.3□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Ppp1r18Q8BQ30 594 aa14.3□□□□□ -0.12
Ldb3-205ENSMUST00000090040 NexmifQ5DTT1 1515 aa14.3□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Mroh3A0A1D5RM54 893 aa14.29□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Cwc22Q8C5N3 908 aaKnown RBP14.29□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Magi1Q6RHR9 1471 aa14.28□□□□□ -0.12
Ldb3-205ENSMUST00000090040 PxdnQ3UQ28 1475 aa14.28□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Grwd1Q810D6 446 aaKnown RBP14.26□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Card11Q8CIS0 1159 aa14.25□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Gm1043A0A140LJC2 1431 aa14.25□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Il16O54824 1322 aa14.23□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Arhgap5P97393 1501 aa14.23□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Lrriq1Q0P5X1 1673 aa14.23□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Peg3Q3URU2 1571 aa14.23□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Naip2Q9QUK4 1447 aa14.22□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Gm13695A2AK44 830 aa14.22□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Shroom2A2ALU4 1481 aa14.22□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Igf1rQ60751 1373 aa14.22□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Rusc2Q80U22 1514 aa14.21□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Plppr3Q7TPB0 716 aa14.21□□□□□ -0.13
Ldb3-205ENSMUST00000090040 Prdm16A2A935 1275 aa14.21□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Safb2Q80YR5 991 aaKnown RBP14.2□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Spag9Q58A65 1321 aaKnown RBP14.2□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Kif3bQ61771 747 aa14.19□□□□□ -0.14
Ldb3-205ENSMUST00000090040 A2mQ6GQT1 1474 aa14.19□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Rapgef6Q5NCJ1 1609 aa14.19□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Mlh3A0A1Y7VMP7 1443 aa14.18□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Usp47Q8BY87 1376 aa14.18□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Abca5Q8K448 1642 aa14.18□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Srpk2O54781 681 aaKnown RBP14.17□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Caskin1Q6P9K8 1431 aa14.17□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Adamts12Q811B3 1600 aa14.17□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Lmo7E9PYF4 1699 aaKnown RBP14.16□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Kdm2aP59997 1161 aa14.16□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Eif5bQ05D44 1216 aaKnown RBP14.16□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Ncoa3O09000 1398 aa14.16□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Stk24Q99KH8 431 aa14.16□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Rtl5Q5DTT4 599 aa14.16□□□□□ -0.14
Ldb3-205ENSMUST00000090040 BC005561E9Q5E2 1589 aa14.16□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Rfx7F8VPJ6 1459 aa14.15□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Abcc5Q9R1X5 1436 aa14.15□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Gm20521D3Z5F7 333 aa14.15□□□□□ -0.14
Ldb3-205ENSMUST00000090040 Fancd2Q80V62 1450 aa14.14□□□□□ -0.15
Ldb3-205ENSMUST00000090040 Rundc1Q0VDN7 615 aa14.13□□□□□ -0.15
Ldb3-205ENSMUST00000090040 Rsph4aQ8BYM7 716 aa14.13□□□□□ -0.15
Ldb3-205ENSMUST00000090040 Nlrp6Q91WS2 869 aa14.13□□□□□ -0.15
Ldb3-205ENSMUST00000090040 3425401B19RikD3Z1D3 1412 aa14.12□□□□□ -0.15
Ldb3-205ENSMUST00000090040 Mrs2Q5NCE8 434 aa14.12□□□□□ -0.15
Ldb3-205ENSMUST00000090040 NeflP08551 543 aa14.11□□□□□ -0.15
Ldb3-205ENSMUST00000090040 IqubQ8CDK3 788 aa14.11□□□□□ -0.15
Ldb3-205ENSMUST00000090040 Zfp644E9QA22 1323 aa14.1□□□□□ -0.15
Ldb3-205ENSMUST00000090040 Ifit1bl1D3Z6F0 470 aa14.09□□□□□ -0.15
Ldb3-205ENSMUST00000090040 Anks4bQ8K3X6 423 aa14.09□□□□□ -0.15
Ldb3-205ENSMUST00000090040 Nsd2Q8BVE8 1365 aa14.09□□□□□ -0.15
Ldb3-205ENSMUST00000090040 Eif4g3Q80XI3 1579 aaKnown RBP14.08□□□□□ -0.16
Ldb3-205ENSMUST00000090040 Lmtk2Q3TYD6 1471 aa14.08□□□□□ -0.16
Ldb3-205ENSMUST00000090040 P3h3Q8CG70 732 aa14.07□□□□□ -0.16
Ldb3-205ENSMUST00000090040 Atp10dQ8K2X1 1416 aa14.07□□□□□ -0.16
Ldb3-205ENSMUST00000090040 Abcc1O35379 1528 aa14.06□□□□□ -0.16
Ldb3-205ENSMUST00000090040 Sin3aQ60520 1274 aaKnown RBP14.05□□□□□ -0.16
Ldb3-205ENSMUST00000090040 Arhgef12Q8R4H2 1543 aaKnown RBP14.05□□□□□ -0.16
Ldb3-205ENSMUST00000090040 Pde4cQ3UEI1 686 aa14.05□□□□□ -0.16
Ldb3-205ENSMUST00000090040 Prdm10Q3UTQ7 1184 aa14.04□□□□□ -0.16
Ldb3-205ENSMUST00000090040 Ythdc2B2RR83 1445 aaKnown RBP14.04□□□□□ -0.16
Ldb3-205ENSMUST00000090040 Map3k5O35099 1380 aa14.04□□□□□ -0.16
Ldb3-205ENSMUST00000090040 Ttll5Q8CHB8 1328 aa14.03□□□□□ -0.16
Ldb3-205ENSMUST00000090040 Abca16E9PWJ7 1678 aa14.02□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Rock2P70336 1388 aa14.02□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Prex2Q3LAC4 1598 aa14.01□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Cd109Q8R422 1442 aa14.01□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Rrbp1Q99PL5 1605 aaKnown RBP14□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Map3k4O08648 1597 aa13.99□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Stag3O70576 1240 aa13.99□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Stard8Q8K031 1019 aa13.98□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Gtf2e1Q9D0D5 440 aa13.98□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Dapk1Q80YE7 1442 aa13.97□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Arid4bA2CG63 1314 aaKnown RBP13.97□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Gapvd1Q6PAR5 1458 aa13.96□□□□□ -0.17
Ldb3-205ENSMUST00000090040 Arhgef11Q68FM7 1552 aa13.96□□□□□ -0.18
Ldb3-205ENSMUST00000090040 ErbinQ80TH2 1402 aa13.95□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Gcc2Q8CHG3 1679 aa13.95□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Srcin1Q9QWI6 1250 aa13.95□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Adcy10Q8C0T9 1614 aa13.94□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Mapkbp1Q6NS57 1503 aa13.94□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Dhx9O70133 1380 aaKnown RBP13.94□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Exosc9Q9JHI7 438 aaKnown RBP13.93□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Abcc2Q8VI47 1543 aa13.93□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Wdr7Q920I9 1489 aa13.93□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Cfap74Q3UY96 1578 aa13.92□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Upf2A2AT37 1269 aaKnown RBP13.92□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Myom3A2ABU4 1439 aa13.92□□□□□ -0.18
Ldb3-205ENSMUST00000090040 4933416C03RikQ3V063 378 aa13.92□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Arhgef40Q3UPH7 1517 aa13.91□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms