RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Stk26Q99JT2 416 aa27,53■■■□□ 2
Smarcc1-201ENSMUST00000088716 Arid3cA6PWV5 409 aa27,51■■□□□ 1,99
Smarcc1-201ENSMUST00000088716 Sh3bp5Q9Z131 463 aa27,51■■□□□ 1,99
Smarcc1-201ENSMUST00000088716 Ccdc88bQ4QRL3 1481 aa27,51■■□□□ 1,99
Smarcc1-201ENSMUST00000088716 Trak1Q6PD31 939 aa27,49■■□□□ 1,99
Smarcc1-201ENSMUST00000088716 U2surpQ6NV83 1029 aaKnown RBP27,49■■□□□ 1,99
Smarcc1-201ENSMUST00000088716 Lemd3Q9WU40 921 aa27,46■■□□□ 1,99
Smarcc1-201ENSMUST00000088716 Mphosph9A6H5Y1 991 aa27,46■■□□□ 1,99
Smarcc1-201ENSMUST00000088716 Spryd3E9Q9B3 442 aa27,45■■□□□ 1,99
Smarcc1-201ENSMUST00000088716 Exoc6Q8R313 802 aa27,45■■□□□ 1,99
Smarcc1-201ENSMUST00000088716 Arhgap35Q91YM2 1499 aa27,45■■□□□ 1,98
Smarcc1-201ENSMUST00000088716 Slc4a3P16283 1227 aa27,45■■□□□ 1,98
Smarcc1-201ENSMUST00000088716 SafbD3YXK2 937 aaKnown RBP27,44■■□□□ 1,98
Smarcc1-201ENSMUST00000088716 Eif4g2Q62448 906 aaKnown RBP27,44■■□□□ 1,98
Smarcc1-201ENSMUST00000088716 Cabp1Q9JLK7 227 aa27,44■■□□□ 1,98
Smarcc1-201ENSMUST00000088716 Plin1Q8CGN5 517 aa27,42■■□□□ 1,98
Smarcc1-201ENSMUST00000088716 Sart3Q9JLI8 962 aaKnown RBP27,42■■□□□ 1,98
Smarcc1-201ENSMUST00000088716 Tcerg1Q8CGF7 1100 aaKnown RBP27,41■■□□□ 1,98
Smarcc1-201ENSMUST00000088716 U2af1Q9D883 239 aaKnown RBP27,41■■□□□ 1,98
Smarcc1-201ENSMUST00000088716 Sin3aQ60520 1274 aaKnown RBP27,4■■□□□ 1,98
Smarcc1-201ENSMUST00000088716 Zscan21Q07231 555 aa27,4■■□□□ 1,98
Smarcc1-201ENSMUST00000088716 Adam1bQ8R534 806 aa27,39■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 CntlnA2AM05 1397 aa27,38■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 Supt16hQ920B9 1047 aa27,37■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 Chmp5Q9D7S9 219 aa27,37■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 Psme1P97371 249 aa27,36■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 Rassf8Q8CJ96 419 aa27,36■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 Mak16Q8BGS0 296 aaKnown RBP27,35■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 Dcaf11Q91VU6 549 aa27,34■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 Golga2Q921M4 999 aa27,34■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 Rock2P70336 1388 aa27,33■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 Baz1bQ9Z277 1479 aa27,33■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 Birc3O08863 600 aa27,33■■□□□ 1,97
Smarcc1-201ENSMUST00000088716 Tmco5bQ80X59 307 aa27,32■■□□□ 1,96
Smarcc1-201ENSMUST00000088716 Dhx57Q6P5D3 1388 aaKnown RBP27,31■■□□□ 1,96
Smarcc1-201ENSMUST00000088716 EspnQ9ET47 871 aa27,3■■□□□ 1,96
Smarcc1-201ENSMUST00000088716 Q3TQI7 289 aaKnown RBP27,3■■□□□ 1,96
Smarcc1-201ENSMUST00000088716 Ecm2Q5FW85 670 aa27,29■■□□□ 1,96
Smarcc1-201ENSMUST00000088716 Pde3bQ61409 1100 aa27,29■■□□□ 1,96
Smarcc1-201ENSMUST00000088716 Nup155Q99P88 1391 aaKnown RBP27,28■■□□□ 1,96
Smarcc1-201ENSMUST00000088716 PtmsQ9D0J8 101 aaKnown RBP27,28■■□□□ 1,96
Smarcc1-201ENSMUST00000088716 Txndc2Q6P902 515 aa27,27■■□□□ 1,96
Smarcc1-201ENSMUST00000088716 Anapc15P60007 132 aa27,26■■□□□ 1,96
Smarcc1-201ENSMUST00000088716 Ggt6Q6PDE7 497 aa27,25■■□□□ 1,95
Smarcc1-201ENSMUST00000088716 Tnnt1O88346 262 aa27,24■■□□□ 1,95
Smarcc1-201ENSMUST00000088716 Nol10Q5RJG1 687 aaKnown RBP27,24■■□□□ 1,95
Smarcc1-201ENSMUST00000088716 Sox12Q04890 314 aa27,23■■□□□ 1,95
Smarcc1-201ENSMUST00000088716 Dnai1Q8C0M8 701 aa27,23■■□□□ 1,95
Smarcc1-201ENSMUST00000088716 Kif3bQ61771 747 aa27,22■■□□□ 1,95
Smarcc1-201ENSMUST00000088716 Srcin1Q9QWI6 1250 aa27,22■■□□□ 1,95
Smarcc1-201ENSMUST00000088716 Spag9Q58A65 1321 aaKnown RBP27,22■■□□□ 1,95
Smarcc1-201ENSMUST00000088716 Cux2P70298 1426 aa27,21■■□□□ 1,95
Smarcc1-201ENSMUST00000088716 Plekhh2Q8C115 1491 aa27,21■■□□□ 1,95
Smarcc1-201ENSMUST00000088716 Gm973E9Q295 1059 aa27,2■■□□□ 1,95
Smarcc1-201ENSMUST00000088716 Pcmtd1P59913 357 aa27,19■■□□□ 1,94
Smarcc1-201ENSMUST00000088716 Cluap1Q8R3P7 413 aa27,19■■□□□ 1,94
Smarcc1-201ENSMUST00000088716 Znf330Q922H9 316 aa27,18■■□□□ 1,94
Smarcc1-201ENSMUST00000088716 Erich6bQ9D4S6 220 aa27,18■■□□□ 1,94
Smarcc1-201ENSMUST00000088716 Znf316Q6PGE4 1016 aa27,18■■□□□ 1,94
Smarcc1-201ENSMUST00000088716 Iffo2Q8R2V2 512 aa27,15■■□□□ 1,94
Smarcc1-201ENSMUST00000088716 HdgfP51859 237 aaKnown RBP27,14■■□□□ 1,94
Smarcc1-201ENSMUST00000088716 Dnttip2Q8R2M2 758 aaKnown RBP27,13■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 MecomP14404 1042 aa27,12■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 CrbnQ8C7D2 445 aa27,12■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Ipo8Q7TMY7 1010 aa27,11■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Carmil1Q6EDY6 1374 aa27,11■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Mfap1aC0HKD8 439 aaKnown RBP27,1■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Mfap1bC0HKD9 439 aaKnown RBP27,1■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Q8BT18 775 aa27,1■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Rsph4aQ8BYM7 716 aa27,1■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Irx3P81067 507 aa27,1■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Ccar1Q8CH18 1146 aaKnown RBP27,09■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Stard8Q8K031 1019 aa27,09■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Ksr2Q3UVC0 959 aa27,08■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 CenpjQ569L8 1344 aa27,08■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Slc4a1apE9PX68 744 aa27,08■■□□□ 1,93
Smarcc1-201ENSMUST00000088716 Sycp2Q9CUU3 1500 aa27,05■■□□□ 1,92
Smarcc1-201ENSMUST00000088716 CgnP59242 1191 aa27,05■■□□□ 1,92
Smarcc1-201ENSMUST00000088716 MlecQ6ZQI3 291 aaKnown RBP27,05■■□□□ 1,92
Smarcc1-201ENSMUST00000088716 AU015836B2RUM3 263 aa27,04■■□□□ 1,92
Smarcc1-201ENSMUST00000088716 Ipo9Q91YE6 1041 aa27,04■■□□□ 1,92
Smarcc1-201ENSMUST00000088716 Fan1Q69ZT1 1020 aa27,03■■□□□ 1,92
Smarcc1-201ENSMUST00000088716 Senp3Q9EP97 568 aaKnown RBP27,03■■□□□ 1,92
Smarcc1-201ENSMUST00000088716 Dnai2A2AC93 623 aa27,03■■□□□ 1,92
Smarcc1-201ENSMUST00000088716 CftrP26361 1476 aa27,02■■□□□ 1,92
Smarcc1-201ENSMUST00000088716 Sart1Q9Z315 806 aaKnown RBP27,02■■□□□ 1,92
Smarcc1-201ENSMUST00000088716 Ccnb3Q810T2 1396 aa27,02■■□□□ 1,92
Smarcc1-201ENSMUST00000088716 R3hcc1Q8BSI6 488 aa27,01■■□□□ 1,91
Smarcc1-201ENSMUST00000088716 Smarce1O54941 411 aaKnown RBP26,99■■□□□ 1,91
Smarcc1-201ENSMUST00000088716 Pibf1E9Q6K3 756 aa26,99■■□□□ 1,91
Smarcc1-201ENSMUST00000088716 Tpm3-rs7D3Z2H9 248 aa26,97■■□□□ 1,91
Smarcc1-201ENSMUST00000088716 GorabQ8BRM2 368 aa26,97■■□□□ 1,91
Smarcc1-201ENSMUST00000088716 Chmp3Q9CQ10 224 aa26,97■■□□□ 1,91
Smarcc1-201ENSMUST00000088716 Phldb1Q6PDH0 1371 aaKnown RBP26,97■■□□□ 1,91
Smarcc1-201ENSMUST00000088716 Brpf1B2RRD7 1212 aa26,97■■□□□ 1,91
Smarcc1-201ENSMUST00000088716 Utp14aQ640M1 767 aaKnown RBP26,96■■□□□ 1,91
Smarcc1-201ENSMUST00000088716 UacaQ8CGB3 1411 aa26,96■■□□□ 1,91
Smarcc1-201ENSMUST00000088716 Rapgef2Q8CHG7 1496 aa26,95■■□□□ 1,9
Smarcc1-201ENSMUST00000088716 Ap3b2Q9JME5 1082 aa26,93■■□□□ 1,9
Smarcc1-201ENSMUST00000088716 Calcoco2A2A6M5 331 aa26,93■■□□□ 1,9
Retrieved 100 of 22,080 RNA–protein pairs in 15,3 ms