RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Stk26Q99JT2 416 aa27.53■■■□□ 2
Smarcc1-201ENSMUST00000088716 Arid3cA6PWV5 409 aa27.51■■□□□ 1.99
Smarcc1-201ENSMUST00000088716 Sh3bp5Q9Z131 463 aa27.51■■□□□ 1.99
Smarcc1-201ENSMUST00000088716 Ccdc88bQ4QRL3 1481 aa27.51■■□□□ 1.99
Smarcc1-201ENSMUST00000088716 Trak1Q6PD31 939 aa27.49■■□□□ 1.99
Smarcc1-201ENSMUST00000088716 U2surpQ6NV83 1029 aaKnown RBP27.49■■□□□ 1.99
Smarcc1-201ENSMUST00000088716 Lemd3Q9WU40 921 aa27.46■■□□□ 1.99
Smarcc1-201ENSMUST00000088716 Mphosph9A6H5Y1 991 aa27.46■■□□□ 1.99
Smarcc1-201ENSMUST00000088716 Spryd3E9Q9B3 442 aa27.45■■□□□ 1.99
Smarcc1-201ENSMUST00000088716 Exoc6Q8R313 802 aa27.45■■□□□ 1.99
Smarcc1-201ENSMUST00000088716 Arhgap35Q91YM2 1499 aa27.45■■□□□ 1.98
Smarcc1-201ENSMUST00000088716 Slc4a3P16283 1227 aa27.45■■□□□ 1.98
Smarcc1-201ENSMUST00000088716 SafbD3YXK2 937 aaKnown RBP27.44■■□□□ 1.98
Smarcc1-201ENSMUST00000088716 Eif4g2Q62448 906 aaKnown RBP27.44■■□□□ 1.98
Smarcc1-201ENSMUST00000088716 Cabp1Q9JLK7 227 aa27.44■■□□□ 1.98
Smarcc1-201ENSMUST00000088716 Plin1Q8CGN5 517 aa27.42■■□□□ 1.98
Smarcc1-201ENSMUST00000088716 Sart3Q9JLI8 962 aaKnown RBP27.42■■□□□ 1.98
Smarcc1-201ENSMUST00000088716 Tcerg1Q8CGF7 1100 aaKnown RBP27.41■■□□□ 1.98
Smarcc1-201ENSMUST00000088716 U2af1Q9D883 239 aaKnown RBP27.41■■□□□ 1.98
Smarcc1-201ENSMUST00000088716 Sin3aQ60520 1274 aaKnown RBP27.4■■□□□ 1.98
Smarcc1-201ENSMUST00000088716 Zscan21Q07231 555 aa27.4■■□□□ 1.98
Smarcc1-201ENSMUST00000088716 Adam1bQ8R534 806 aa27.39■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 CntlnA2AM05 1397 aa27.38■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 Supt16hQ920B9 1047 aa27.37■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 Chmp5Q9D7S9 219 aa27.37■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 Psme1P97371 249 aa27.36■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 Rassf8Q8CJ96 419 aa27.36■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 Mak16Q8BGS0 296 aaKnown RBP27.35■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 Dcaf11Q91VU6 549 aa27.34■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 Golga2Q921M4 999 aa27.34■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 Rock2P70336 1388 aa27.33■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 Baz1bQ9Z277 1479 aa27.33■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 Birc3O08863 600 aa27.33■■□□□ 1.97
Smarcc1-201ENSMUST00000088716 Tmco5bQ80X59 307 aa27.32■■□□□ 1.96
Smarcc1-201ENSMUST00000088716 Dhx57Q6P5D3 1388 aaKnown RBP27.31■■□□□ 1.96
Smarcc1-201ENSMUST00000088716 EspnQ9ET47 871 aa27.3■■□□□ 1.96
Smarcc1-201ENSMUST00000088716 Q3TQI7 289 aaKnown RBP27.3■■□□□ 1.96
Smarcc1-201ENSMUST00000088716 Ecm2Q5FW85 670 aa27.29■■□□□ 1.96
Smarcc1-201ENSMUST00000088716 Pde3bQ61409 1100 aa27.29■■□□□ 1.96
Smarcc1-201ENSMUST00000088716 Nup155Q99P88 1391 aaKnown RBP27.28■■□□□ 1.96
Smarcc1-201ENSMUST00000088716 PtmsQ9D0J8 101 aaKnown RBP27.28■■□□□ 1.96
Smarcc1-201ENSMUST00000088716 Txndc2Q6P902 515 aa27.27■■□□□ 1.96
Smarcc1-201ENSMUST00000088716 Anapc15P60007 132 aa27.26■■□□□ 1.96
Smarcc1-201ENSMUST00000088716 Ggt6Q6PDE7 497 aa27.25■■□□□ 1.95
Smarcc1-201ENSMUST00000088716 Tnnt1O88346 262 aa27.24■■□□□ 1.95
Smarcc1-201ENSMUST00000088716 Nol10Q5RJG1 687 aaKnown RBP27.24■■□□□ 1.95
Smarcc1-201ENSMUST00000088716 Sox12Q04890 314 aa27.23■■□□□ 1.95
Smarcc1-201ENSMUST00000088716 Dnai1Q8C0M8 701 aa27.23■■□□□ 1.95
Smarcc1-201ENSMUST00000088716 Kif3bQ61771 747 aa27.22■■□□□ 1.95
Smarcc1-201ENSMUST00000088716 Srcin1Q9QWI6 1250 aa27.22■■□□□ 1.95
Smarcc1-201ENSMUST00000088716 Spag9Q58A65 1321 aaKnown RBP27.22■■□□□ 1.95
Smarcc1-201ENSMUST00000088716 Cux2P70298 1426 aa27.21■■□□□ 1.95
Smarcc1-201ENSMUST00000088716 Plekhh2Q8C115 1491 aa27.21■■□□□ 1.95
Smarcc1-201ENSMUST00000088716 Gm973E9Q295 1059 aa27.2■■□□□ 1.95
Smarcc1-201ENSMUST00000088716 Pcmtd1P59913 357 aa27.19■■□□□ 1.94
Smarcc1-201ENSMUST00000088716 Cluap1Q8R3P7 413 aa27.19■■□□□ 1.94
Smarcc1-201ENSMUST00000088716 Znf330Q922H9 316 aa27.18■■□□□ 1.94
Smarcc1-201ENSMUST00000088716 Erich6bQ9D4S6 220 aa27.18■■□□□ 1.94
Smarcc1-201ENSMUST00000088716 Znf316Q6PGE4 1016 aa27.18■■□□□ 1.94
Smarcc1-201ENSMUST00000088716 Iffo2Q8R2V2 512 aa27.15■■□□□ 1.94
Smarcc1-201ENSMUST00000088716 HdgfP51859 237 aaKnown RBP27.14■■□□□ 1.94
Smarcc1-201ENSMUST00000088716 Dnttip2Q8R2M2 758 aaKnown RBP27.13■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 MecomP14404 1042 aa27.12■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 CrbnQ8C7D2 445 aa27.12■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Ipo8Q7TMY7 1010 aa27.11■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Carmil1Q6EDY6 1374 aa27.11■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Mfap1aC0HKD8 439 aaKnown RBP27.1■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Mfap1bC0HKD9 439 aaKnown RBP27.1■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Q8BT18 775 aa27.1■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Rsph4aQ8BYM7 716 aa27.1■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Irx3P81067 507 aa27.1■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Ccar1Q8CH18 1146 aaKnown RBP27.09■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Stard8Q8K031 1019 aa27.09■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Ksr2Q3UVC0 959 aa27.08■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 CenpjQ569L8 1344 aa27.08■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Slc4a1apE9PX68 744 aa27.08■■□□□ 1.93
Smarcc1-201ENSMUST00000088716 Sycp2Q9CUU3 1500 aa27.05■■□□□ 1.92
Smarcc1-201ENSMUST00000088716 CgnP59242 1191 aa27.05■■□□□ 1.92
Smarcc1-201ENSMUST00000088716 MlecQ6ZQI3 291 aaKnown RBP27.05■■□□□ 1.92
Smarcc1-201ENSMUST00000088716 AU015836B2RUM3 263 aa27.04■■□□□ 1.92
Smarcc1-201ENSMUST00000088716 Ipo9Q91YE6 1041 aa27.04■■□□□ 1.92
Smarcc1-201ENSMUST00000088716 Fan1Q69ZT1 1020 aa27.03■■□□□ 1.92
Smarcc1-201ENSMUST00000088716 Senp3Q9EP97 568 aaKnown RBP27.03■■□□□ 1.92
Smarcc1-201ENSMUST00000088716 Dnai2A2AC93 623 aa27.03■■□□□ 1.92
Smarcc1-201ENSMUST00000088716 CftrP26361 1476 aa27.02■■□□□ 1.92
Smarcc1-201ENSMUST00000088716 Sart1Q9Z315 806 aaKnown RBP27.02■■□□□ 1.92
Smarcc1-201ENSMUST00000088716 Ccnb3Q810T2 1396 aa27.02■■□□□ 1.92
Smarcc1-201ENSMUST00000088716 R3hcc1Q8BSI6 488 aa27.01■■□□□ 1.91
Smarcc1-201ENSMUST00000088716 Smarce1O54941 411 aaKnown RBP26.99■■□□□ 1.91
Smarcc1-201ENSMUST00000088716 Pibf1E9Q6K3 756 aa26.99■■□□□ 1.91
Smarcc1-201ENSMUST00000088716 Tpm3-rs7D3Z2H9 248 aa26.97■■□□□ 1.91
Smarcc1-201ENSMUST00000088716 GorabQ8BRM2 368 aa26.97■■□□□ 1.91
Smarcc1-201ENSMUST00000088716 Chmp3Q9CQ10 224 aa26.97■■□□□ 1.91
Smarcc1-201ENSMUST00000088716 Phldb1Q6PDH0 1371 aaKnown RBP26.97■■□□□ 1.91
Smarcc1-201ENSMUST00000088716 Brpf1B2RRD7 1212 aa26.97■■□□□ 1.91
Smarcc1-201ENSMUST00000088716 Utp14aQ640M1 767 aaKnown RBP26.96■■□□□ 1.91
Smarcc1-201ENSMUST00000088716 UacaQ8CGB3 1411 aa26.96■■□□□ 1.91
Smarcc1-201ENSMUST00000088716 Rapgef2Q8CHG7 1496 aa26.95■■□□□ 1.9
Smarcc1-201ENSMUST00000088716 Ap3b2Q9JME5 1082 aa26.93■■□□□ 1.9
Smarcc1-201ENSMUST00000088716 Calcoco2A2A6M5 331 aa26.93■■□□□ 1.9
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms