RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Neurod2Q62414 383 aa13.46□□□□□ -0.25
Rtn3-204ENSMUST00000088171 Map4P27546 1125 aaKnown RBP13.46□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Hsp90ab1P11499 724 aaKnown RBP13.45□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Fgd6Q69ZL1 1399 aa13.45□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Calr4Q3TQS0 420 aa13.45□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Ecm2Q5FW85 670 aa13.44□□□□□ -0.26
Rtn3-204ENSMUST00000088171 HnrnpuQ8VEK3 800 aaKnown RBP13.44□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Q3TQI7 289 aaKnown RBP13.44□□□□□ -0.26
Rtn3-204ENSMUST00000088171 CftrP26361 1476 aa13.43□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Cecr2E9Q2Z1 1453 aa13.43□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Map7O88735 730 aa13.43□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Gtf2e1Q9D0D5 440 aa13.43□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Ppp4r2Q0VGB7 417 aa13.42□□□□□ -0.26
Rtn3-204ENSMUST00000088171 MccE9PWI3 1003 aa13.41□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Spag9Q58A65 1321 aaKnown RBP13.41□□□□□ -0.26
Rtn3-204ENSMUST00000088171 ScribQ80U72 1612 aa13.41□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Ofd1Q80Z25 1017 aa13.4□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Ncoa2Q61026 1462 aa13.4□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Birc3O08863 600 aa13.4□□□□□ -0.26
Rtn3-204ENSMUST00000088171 Trim44Q9QXA7 346 aa13.4□□□□□ -0.26
Rtn3-204ENSMUST00000088171 CadpsQ80TJ1 1355 aa13.39□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Wwc2Q6NXJ0 1187 aa13.39□□□□□ -0.27
Rtn3-204ENSMUST00000088171 U2surpQ6NV83 1029 aaKnown RBP13.39□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Chrna2Q91X60 512 aa13.39□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Carmil1Q6EDY6 1374 aa13.39□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Chmp3Q9CQ10 224 aa13.38□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Kif3bQ61771 747 aa13.38□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Plin1Q8CGN5 517 aa13.37□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Ift140E9PY46 1464 aa13.37□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Sf3b2Q3UJB0 878 aaKnown RBP13.37□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Cc2d2bA0A286YDU8 1405 aa13.37□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Wdr43Q6ZQL4 677 aaKnown RBP13.37□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Apbb1Q9QXJ1 710 aa13.37□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Casc1Q6TDU8 730 aa13.36□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Lmod3E9QA62 571 aa13.35□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Znf316Q6PGE4 1016 aa13.35□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Jph4Q80WT0 628 aa13.34□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Tnnt1O88346 262 aa13.34□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Cttnbp2B9EJA2 1648 aa13.34□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Fhad1A6PWD2 1420 aa13.34□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Urb2E9Q7L1 1524 aaKnown RBP13.34□□□□□ -0.27
Rtn3-204ENSMUST00000088171 Mia2Q91ZV0 1396 aa13.32□□□□□ -0.28
Rtn3-204ENSMUST00000088171 KnstrnQ9D9Z1 312 aaKnown RBP13.32□□□□□ -0.28
Rtn3-204ENSMUST00000088171 CanxP35564 591 aaKnown RBP13.32□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Utp14aQ640M1 767 aaKnown RBP13.31□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Isy1Q69ZQ2 285 aaKnown RBP13.31□□□□□ -0.28
Rtn3-204ENSMUST00000088171 MecomP14404 1042 aa13.31□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Tpm3-rs7D3Z2H9 248 aa13.3□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Pip4k2bQ80XI4 416 aa13.29□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Vps53Q8CCB4 832 aa13.29□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Iffo2Q8R2V2 512 aa13.29□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Ifit1bl1D3Z6F0 470 aa13.29□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Gm973E9Q295 1059 aa13.28□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Smc4Q8CG47 1286 aa13.28□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Tomm22Q9CPQ3 142 aa13.28□□□□□ -0.28
Rtn3-204ENSMUST00000088171 U2af1Q9D883 239 aaKnown RBP13.28□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Noc3lQ8VI84 807 aaKnown RBP13.28□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Efcab5A0JP43 1406 aa13.28□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Plcb2A3KGF7 1181 aa13.28□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Ccar1Q8CH18 1146 aaKnown RBP13.28□□□□□ -0.28
Rtn3-204ENSMUST00000088171 Ddx11Q6AXC6 880 aa13.27□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Cabp4Q8VHC5 271 aa13.26□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Atf3Q60765 181 aa13.26□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Sirt1Q923E4 737 aa13.25□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Igf1rQ60751 1373 aa13.25□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Egfem1Q8C088 590 aa13.25□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Htatsf1Q8BGC0 757 aa13.24□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Stard8Q8K031 1019 aa13.24□□□□□ -0.29
Rtn3-204ENSMUST00000088171 CntlnA2AM05 1397 aa13.23□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Slc4a1apE9PX68 744 aa13.23□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Aebp1Q640N1 1128 aa13.23□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Tmco5bQ80X59 307 aa13.22□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Tmf1B9EKI3 1091 aa13.22□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Chmp7Q8R1T1 451 aa13.22□□□□□ -0.29
Rtn3-204ENSMUST00000088171 CenpjQ569L8 1344 aa13.22□□□□□ -0.29
Rtn3-204ENSMUST00000088171 Fyb1O35601 819 aa13.21□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Rab11fip3Q8CHD8 1047 aa13.2□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Kcnn1Q9EQR3 537 aa13.2□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Trak1Q6PD31 939 aa13.2□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Fyco1Q8VDC1 1437 aa13.19□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Polr1aO35134 1717 aaKnown RBP13.19□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Pkd2O35245 966 aa13.19□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Sall2Q9QX96 1004 aa13.19□□□□□ -0.3
Rtn3-204ENSMUST00000088171 PtmsQ9D0J8 101 aaKnown RBP13.19□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Gm14025A2AP89 1413 aa13.19□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Dhx16G3X8X0 1044 aaKnown RBP13.19□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Sart1Q9Z315 806 aaKnown RBP13.19□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Adam1bQ8R534 806 aa13.18□□□□□ -0.3
Rtn3-204ENSMUST00000088171 R3hcc1Q8BSI6 488 aa13.18□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Ppm1gQ61074 542 aa13.18□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Armcx1Q9CX83 456 aa13.17□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Ccdc47Q9D024 483 aaKnown RBP13.17□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Aebp2Q9Z248 504 aaKnown RBP13.17□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Eva1cP58659 440 aa13.17□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Stk31Q99MW1 1018 aa13.17□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Rwdd1Q9CQK7 243 aa13.17□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Srcin1Q9QWI6 1250 aa13.17□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Kri1Q8VDQ9 704 aaKnown RBP13.16□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Bcl11aQ9QYE3 773 aa13.16□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Dcaf11Q91VU6 549 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms