RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Apbb1Q9QXJ1 710 aa8.27□□□□□ -1.09
Scn1a-201ENSMUST00000077489 AU015836B2RUM3 263 aa8.26□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Ipo9Q91YE6 1041 aa8.26□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Gtf2e1Q9D0D5 440 aa8.26□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Sycp2Q9CUU3 1500 aa8.26□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Plekhh2Q8C115 1491 aa8.26□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Rundc1Q0VDN7 615 aa8.25□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Rtf1A2AQ19 715 aaKnown RBP8.25□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Pkd2O35245 966 aa8.25□□□□□ -1.09
Scn1a-201ENSMUST00000077489 UacaQ8CGB3 1411 aa8.25□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Mak16Q8BGS0 296 aaKnown RBP8.24□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Irx6Q9ER75 438 aa8.24□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Dnai1Q8C0M8 701 aa8.23□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Carmil1Q6EDY6 1374 aa8.23□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Aebp1Q640N1 1128 aa8.23□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Rpap1Q80TE0 1409 aa8.23□□□□□ -1.09
Scn1a-201ENSMUST00000077489 R3hcc1Q8BSI6 488 aa8.23□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Zscan21Q07231 555 aa8.22□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Ipo8Q7TMY7 1010 aa8.22□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Tnnt2P50752 301 aa8.22□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Sh3bp5Q9Z131 463 aa8.22□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Mphosph9A6H5Y1 991 aa8.21□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Dbr1Q923B1 550 aa8.21□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Ccdc88bQ4QRL3 1481 aa8.21□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Cald1E9QA15 768 aaKnown RBP8.21□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Hspa5P20029 655 aaKnown RBP8.21□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Dnai2A2AC93 623 aa8.21□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Speer4f1Q9D5Q6 258 aa8.21□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Cgnl1Q6AW69 1298 aa8.21□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Nup155Q99P88 1391 aaKnown RBP8.21□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Cux1P53564 1515 aa8.21□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Supt16hQ920B9 1047 aa8.2□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Atp6v1dP57746 247 aa8.2□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Spag9Q58A65 1321 aaKnown RBP8.19□□□□□ -1.1
Scn1a-201ENSMUST00000077489 B4galnt3Q6L8S8 986 aa8.19□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Rrp12Q6P5B0 1295 aaKnown RBP8.19□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Golga2Q921M4 999 aa8.19□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Dnttip2Q8R2M2 758 aaKnown RBP8.19□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Tpm3-rs7D3Z2H9 248 aa8.19□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Ccar1Q8CH18 1146 aaKnown RBP8.19□□□□□ -1.1
Scn1a-201ENSMUST00000077489 CenpjQ569L8 1344 aa8.19□□□□□ -1.1
Scn1a-201ENSMUST00000077489 MsnP26041 577 aaKnown RBP8.19□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Armcx1Q9CX83 456 aa8.19□□□□□ -1.1
Scn1a-201ENSMUST00000077489 RdxP26043 583 aaKnown RBP8.19□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Smarca2Q6DIC0 1577 aa8.18□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Rab11fip3Q8CHD8 1047 aa8.18□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Exoc6Q8R313 802 aa8.18□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Ifit1bl1D3Z6F0 470 aa8.18□□□□□ -1.1
Scn1a-201ENSMUST00000077489 CftrP26361 1476 aa8.18□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Chmp5Q9D7S9 219 aa8.18□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Cttnbp2B9EJA2 1648 aa8.18□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Erich6bQ9D4S6 220 aa8.17□□□□□ -1.1
Scn1a-201ENSMUST00000077489 NgefQ8CHT1 710 aa8.17□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Ncoa2Q61026 1462 aa8.17□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Lemd3Q9WU40 921 aa8.17□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Nol10Q5RJG1 687 aaKnown RBP8.16□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Cnga1P29974 684 aa8.16□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Ylpm1Q9R0I7 1386 aaKnown RBP8.16□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Smarca4Q3TKT4 1613 aaKnown RBP8.16□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Cspp1B2RX88 1205 aa8.16□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Rapgef2Q8CHG7 1496 aa8.16□□□□□ -1.1
Scn1a-201ENSMUST00000077489 Ddrgk1Q80WW9 315 aa8.15□□□□□ -1.1
Scn1a-201ENSMUST00000077489 AknaQ80VW7 1404 aa8.15□□□□□ -1.11
Scn1a-201ENSMUST00000077489 1700019A02RikA0A087WPV9 146 aa8.15□□□□□ -1.11
Scn1a-201ENSMUST00000077489 SetQ9EQU5 289 aaKnown RBP8.14□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Rassf8Q8CJ96 419 aa8.14□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Ankrd36D3Z4K0 1415 aa8.14□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Phldb1Q6PDH0 1371 aaKnown RBP8.14□□□□□ -1.11
Scn1a-201ENSMUST00000077489 U2af1Q9D883 239 aaKnown RBP8.14□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Ccdc47Q9D024 483 aaKnown RBP8.14□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Glipr1l2Q9CQ35 332 aa8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Cux2P70298 1426 aa8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Q8BT18 775 aa8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 WrnO09053 1401 aa8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Polr1aO35134 1717 aaKnown RBP8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Anapc15P60007 132 aa8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Synj1Q8CHC4 1574 aa8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Q3TQI7 289 aaKnown RBP8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Iffo2Q8R2V2 512 aa8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 BccipQ9CWI3 316 aa8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Pcmtd1P59913 357 aa8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Trak1Q6PD31 939 aa8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Ppp1r18Q8BQ30 594 aa8.13□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Psme1P97371 249 aa8.12□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Atad2bE9Q166 1460 aaKnown RBP8.12□□□□□ -1.11
Scn1a-201ENSMUST00000077489 HdgfP51859 237 aaKnown RBP8.12□□□□□ -1.11
Scn1a-201ENSMUST00000077489 U2surpQ6NV83 1029 aaKnown RBP8.12□□□□□ -1.11
Scn1a-201ENSMUST00000077489 MyclP10166 368 aa8.12□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Dcaf11Q91VU6 549 aa8.11□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Smg6P61406 1418 aaKnown RBP8.11□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Cabp1Q9JLK7 227 aa8.11□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Srcin1Q9QWI6 1250 aa8.11□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Ccnb3Q810T2 1396 aa8.11□□□□□ -1.11
Scn1a-201ENSMUST00000077489 MecomP14404 1042 aa8.11□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Rsph3aQ3UFY4 516 aa8.11□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Mfap1aC0HKD8 439 aaKnown RBP8.11□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Mfap1bC0HKD9 439 aaKnown RBP8.11□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Rtn4Q99P72 1162 aaKnown RBP8.11□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Ciz1Q8VEH2 845 aa8.1□□□□□ -1.11
Scn1a-201ENSMUST00000077489 Becn1O88597 448 aa8.1□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms