RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 Inpp5dQ9ES52 1191 aa6.63□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Arid4bA2CG63 1314 aaKnown RBP6.63□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Baz1aO88379 1555 aa6.63□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Ttll13A4Q9F6 804 aa6.63□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Fgd1P52734 960 aa6.63□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Golga2Q921M4 999 aa6.63□□□□□ -1.35
Ush2a-201ENSMUST00000060479 PtmaP26350 111 aa6.62□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Stag3O70576 1240 aa6.62□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Prkrip1Q9CWV6 186 aaKnown RBP6.62□□□□□ -1.35
Ush2a-201ENSMUST00000060479 KnstrnQ9D9Z1 312 aaKnown RBP6.62□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Ak7Q9D2H2 614 aa6.62□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Plcd4Q8K3R3 807 aa6.61□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Chmp4bQ9D8B3 224 aaKnown RBP6.61□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Rpgrip1lQ8CG73 1264 aa6.61□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Exosc9Q9JHI7 438 aaKnown RBP6.61□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Baz1bQ9Z277 1479 aa6.61□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Zfp444Q3TDV8 331 aaKnown RBP6.61□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Cecr2E9Q2Z1 1453 aa6.61□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Kcnh8P59111 1102 aa6.61□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Mapk8ip3Q9ESN9 1337 aa6.61□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Plekhg5Q66T02 1073 aa6.61□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Rapgef2Q8CHG7 1496 aa6.6□□□□□ -1.35
Ush2a-201ENSMUST00000060479 U2af1Q9D883 239 aaKnown RBP6.6□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Crybg2B7ZCC2 1516 aa6.6□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Gm6268A2A3U9 297 aa6.6□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Sart3Q9JLI8 962 aaKnown RBP6.6□□□□□ -1.35
Ush2a-201ENSMUST00000060479 CftrP26361 1476 aa6.6□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Nup155Q99P88 1391 aaKnown RBP6.6□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Dcaf11Q91VU6 549 aa6.59□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Rrp12Q6P5B0 1295 aaKnown RBP6.59□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Slc4a1apE9PX68 744 aa6.59□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Srcin1Q9QWI6 1250 aa6.59□□□□□ -1.35
Ush2a-201ENSMUST00000060479 Eif2s2Q99L45 331 aaKnown RBP6.58□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Kif27Q7M6Z4 1394 aa6.58□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Ccnb3Q810T2 1396 aa6.58□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Mfap1aC0HKD8 439 aaKnown RBP6.58□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Mfap1bC0HKD9 439 aaKnown RBP6.58□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Ksr2Q3UVC0 959 aa6.58□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Pdcl3Q8BVF2 240 aa6.58□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Cluap1Q8R3P7 413 aa6.58□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Iqcf3Q9D498 203 aa6.58□□□□□ -1.36
Ush2a-201ENSMUST00000060479 4933402E13RikQ9D4D2 429 aa6.57□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Ccdc18Q640L5 1455 aa6.57□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Fam184bQ0KK56 942 aa6.56□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Ccar1Q8CH18 1146 aaKnown RBP6.56□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Zscan10Q3URR7 782 aa6.56□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Carmil1Q6EDY6 1374 aa6.55□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Usp47Q8BY87 1376 aa6.55□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Trim58Q5NCC9 485 aa6.55□□□□□ -1.36
Ush2a-201ENSMUST00000060479 HnrnpuQ8VEK3 800 aaKnown RBP6.55□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Liat1Q810M6 228 aa6.55□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Stard8Q8K031 1019 aa6.55□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Fyco1Q8VDC1 1437 aa6.55□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Tmco5bQ80X59 307 aa6.55□□□□□ -1.36
Ush2a-201ENSMUST00000060479 L3mbtl2P59178 703 aa6.55□□□□□ -1.36
Ush2a-201ENSMUST00000060479 AampJ3QN89 436 aa6.54□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Q7TT23 1179 aa6.54□□□□□ -1.36
Ush2a-201ENSMUST00000060479 1700019A02RikA0A087WPV9 146 aa6.54□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Znf330Q922H9 316 aa6.54□□□□□ -1.36
Ush2a-201ENSMUST00000060479 PtmsQ9D0J8 101 aaKnown RBP6.54□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Ccdc30Q8BVF4 654 aa6.53□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Rock2P70336 1388 aa6.53□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Fmn1Q05860 1466 aa6.53□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Pank1Q8K4K6 548 aa6.53□□□□□ -1.36
Ush2a-201ENSMUST00000060479 GorabQ8BRM2 368 aa6.53□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Erich6bQ9D4S6 220 aa6.53□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Zfp644E9QA22 1323 aa6.53□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Stk26Q99JT2 416 aa6.53□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Dhx29Q6PGC1 1365 aaKnown RBP6.53□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Ralbp1Q62172 648 aa6.53□□□□□ -1.36
Ush2a-201ENSMUST00000060479 Sart1Q9Z315 806 aaKnown RBP6.52□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Tsen2Q6P7W5 460 aa6.52□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Dapk1Q80YE7 1442 aa6.52□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Fhad1A6PWD2 1420 aa6.51□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Ccdc183A2AJB1 534 aa6.51□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Ddrgk1Q80WW9 315 aa6.51□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Usp40Q8BWR4 1235 aa6.51□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Rfx1P48377 963 aa6.51□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Rabep1O35551 862 aa6.5□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Irx6Q9ER75 438 aa6.5□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Ttll5Q8CHB8 1328 aa6.5□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Ipo4Q8VI75 1082 aa6.5□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Rsph3aQ3UFY4 516 aa6.5□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Fan1Q69ZT1 1020 aa6.5□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Atl3Q91YH5 541 aa6.5□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Rpap1Q80TE0 1409 aa6.5□□□□□ -1.37
Ush2a-201ENSMUST00000060479 SlkO54988 1233 aa6.5□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Casc1Q6TDU8 730 aa6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Arhgap35Q91YM2 1499 aa6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 U2surpQ6NV83 1029 aaKnown RBP6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 VgfQ0VGU4 617 aa6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Zfp777B9EKF4 885 aa6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Plppr3Q7TPB0 716 aa6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Rrp9Q91WM3 475 aaKnown RBP6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 LrpprcQ6PB66 1392 aaKnown RBP6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 GsdmaQ9EST1 446 aa6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Ppp2r1aQ76MZ3 589 aa6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Naip1Q9QWK5 1403 aa6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 BccipQ9CWI3 316 aa6.49□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Pde4cQ3UEI1 686 aa6.49□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms