RNA–Protein interactions for RNA: ENSMUST00000055949.3

Pcdhb18-201, Transcript of Protocadherin beta-18, mousemouse

APPRIS P1 BASIC

Gene Pcdhb18, Length 5,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18-201ENSMUST00000055949 Plcb2A3KGF7 1181 aa16.32■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Aebp1Q640N1 1128 aa16.31■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Gm973E9Q295 1059 aa16.31■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Apbb1Q9QXJ1 710 aa16.31■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Tmf1B9EKI3 1091 aa16.31■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Rwdd1Q9CQK7 243 aa16.3■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Pkd2O35245 966 aa16.3■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Lmod3E9QA62 571 aa16.29■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Stk26Q99JT2 416 aa16.29■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Q3TQI7 289 aaKnown RBP16.29■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Fyco1Q8VDC1 1437 aa16.28■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Fmn1Q05860 1466 aa16.27■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 Rassf8Q8CJ96 419 aa16.27■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 Rpap1Q80TE0 1409 aa16.27■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 Anapc15P60007 132 aa16.26■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 Ifit1bl1D3Z6F0 470 aa16.26■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 Q8BT18 775 aa16.25■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 Phldb1Q6PDH0 1371 aaKnown RBP16.25■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 Ap3b2Q9JME5 1082 aa16.24■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 CntlnA2AM05 1397 aa16.24■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 Kif3bQ61771 747 aa16.24■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 Rundc1Q0VDN7 615 aa16.23■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 U2surpQ6NV83 1029 aaKnown RBP16.22■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 U2af1Q9D883 239 aaKnown RBP16.22■□□□□ 0.19
Pcdhb18-201ENSMUST00000055949 Cux2P70298 1426 aa16.2■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 SafbD3YXK2 937 aaKnown RBP16.2■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Pabpn1Q8CCS6 302 aaKnown RBP16.2■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Birc3O08863 600 aa16.2■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Trak1Q6PD31 939 aa16.2■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Tpm3-rs7D3Z2H9 248 aa16.2■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Bcl11aQ9QYE3 773 aa16.2■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Kdm5dQ62240 1548 aa16.19■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 CenpjQ569L8 1344 aa16.19■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Rab11fip3Q8CHD8 1047 aa16.19■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 MecomP14404 1042 aa16.17■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Sox12Q04890 314 aa16.17■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Srcin1Q9QWI6 1250 aa16.17■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 WrnO09053 1401 aa16.16■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Zscan21Q07231 555 aa16.16■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 R3hcc1Q8BSI6 488 aa16.16■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Iffo2Q8R2V2 512 aa16.16■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Baz1bQ9Z277 1479 aa16.15■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Speer4f1Q9D5Q6 258 aa16.15■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Cabp1Q9JLK7 227 aa16.15■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Nup155Q99P88 1391 aaKnown RBP16.15■□□□□ 0.18
Pcdhb18-201ENSMUST00000055949 Golga2Q921M4 999 aa16.13■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Rock2P70336 1388 aa16.12■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Carmil1Q6EDY6 1374 aa16.12■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Utp14aQ640M1 767 aaKnown RBP16.12■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Cep162Q6ZQ06 1403 aa16.12■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Mphosph9A6H5Y1 991 aa16.11■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Dcaf11Q91VU6 549 aa16.11■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Hspa5P20029 655 aaKnown RBP16.11■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Irx3P81067 507 aa16.11■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Smc4Q8CG47 1286 aa16.11■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Ppm1fQ8CGA0 452 aa16.11■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Sart1Q9Z315 806 aaKnown RBP16.1■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Pak3Q61036 559 aa16.1■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Chmp3Q9CQ10 224 aa16.1■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Arhgap35Q91YM2 1499 aa16.1■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Mak16Q8BGS0 296 aaKnown RBP16.1■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Tmco5bQ80X59 307 aa16.09■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Plekhh2Q8C115 1491 aa16.09■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Smarce1O54941 411 aaKnown RBP16.09■□□□□ 0.17
Pcdhb18-201ENSMUST00000055949 Plin1Q8CGN5 517 aa16.07■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Armcx1Q9CX83 456 aa16.07■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Calcoco2A2A6M5 331 aa16.07■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Ddx11Q6AXC6 880 aa16.06■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Stk31Q99MW1 1018 aa16.06■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Tnnt1O88346 262 aa16.05■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Ccar1Q8CH18 1146 aaKnown RBP16.05■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Ccdc47Q9D024 483 aaKnown RBP16.05■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Dbr1Q923B1 550 aa16.05■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Chmp5Q9D7S9 219 aa16.04■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Tcerg1Q8CGF7 1100 aaKnown RBP16.04■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Atp6v1dP57746 247 aa16.03■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Znf316Q6PGE4 1016 aa16.03■□□□□ 0.16
Pcdhb18-201ENSMUST00000055949 Cgnl1Q6AW69 1298 aa16.02■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 B4galnt3Q6L8S8 986 aa16.01■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 Atad2bE9Q166 1460 aaKnown RBP16.01■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 Cabp4Q8VHC5 271 aa16.01■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 Slc4a3P16283 1227 aa16■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 UacaQ8CGB3 1411 aa15.99■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 Ciz1Q8VEH2 845 aa15.99■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 Ccnb3Q810T2 1396 aa15.99■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 EspnQ9ET47 871 aa15.99■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 LrpprcQ6PB66 1392 aaKnown RBP15.98■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 Fan1Q69ZT1 1020 aa15.97■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 Chmp7Q8R1T1 451 aa15.96■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 Supt16hQ920B9 1047 aa15.96■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 Spryd3E9Q9B3 442 aa15.96■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 Brpf1B2RRD7 1212 aa15.96■□□□□ 0.15
Pcdhb18-201ENSMUST00000055949 Soga1E1U8D0 1418 aa15.95■□□□□ 0.14
Pcdhb18-201ENSMUST00000055949 AU015836B2RUM3 263 aa15.95■□□□□ 0.14
Pcdhb18-201ENSMUST00000055949 Cplx2P84086 134 aa15.94■□□□□ 0.14
Pcdhb18-201ENSMUST00000055949 Crybg2B7ZCC2 1516 aa15.94■□□□□ 0.14
Pcdhb18-201ENSMUST00000055949 Sycp2Q9CUU3 1500 aa15.94■□□□□ 0.14
Pcdhb18-201ENSMUST00000055949 CgnP59242 1191 aa15.92■□□□□ 0.14
Pcdhb18-201ENSMUST00000055949 Ksr2Q3UVC0 959 aa15.92■□□□□ 0.14
Pcdhb18-201ENSMUST00000055949 Slc4a1apE9PX68 744 aa15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms