RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Mia2Q91ZV0 1396 aa10.1□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Fhad1A6PWD2 1420 aa10.09□□□□□ -0.79
Clrn1-202ENSMUST00000055636 NclP09405 707 aaKnown RBP10.09□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Pelp1Q9DBD5 1123 aaKnown RBP10.09□□□□□ -0.79
Clrn1-202ENSMUST00000055636 Kdm6bQ5NCY0 1641 aa10.08□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Arhgef11Q68FM7 1552 aa10.07□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Vps8Q0P5W1 1427 aa10.07□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Prex2Q3LAC4 1598 aa10.07□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Fgd6Q69ZL1 1399 aa10.07□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Abcc5Q9R1X5 1436 aa10.06□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Zcchc11B2RX14 1644 aaKnown RBP10.06□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Ccdc141E9Q8Q6 1531 aa10.06□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Dnmt1P13864 1620 aaKnown RBP10.06□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Mroh2aD3Z750 1679 aa10.06□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Tdrd9Q14BI7 1383 aa10.06□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Dennd4bQ3U1Y4 1499 aa10.06□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Anp32aO35381 247 aa10.05□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Magi1Q6RHR9 1471 aa10.05□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Gcc2Q8CHG3 1679 aa10.05□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Map3k4O08648 1597 aa10.04□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Mtus2Q3UHD3 1353 aa10.04□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Cdc42bpaQ3UU96 1719 aa10.03□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Adcy10Q8C0T9 1614 aa10.03□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Plekhh2Q8C115 1491 aa10.03□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Mphosph9A6H5Y1 991 aa10.03□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Nolc1E9Q5C9 702 aaKnown RBP10.03□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Arhgef12Q8R4H2 1543 aaKnown RBP10.03□□□□□ -0.8
Clrn1-202ENSMUST00000055636 Ncoa2Q61026 1462 aa10.01□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Ccer2J3QPU5 274 aa10.01□□□□□ -0.81
Clrn1-202ENSMUST00000055636 UacaQ8CGB3 1411 aa10.01□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Adgrb2Q8CGM1 1561 aa10□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Gm14025A2AP89 1413 aa10□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Fam163aQ8CAA5 168 aa10□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Kiaa1551Q5DTW7 1521 aa9.99□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Stra8P70278 393 aa9.99□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Calr4Q3TQS0 420 aa9.99□□□□□ -0.81
Clrn1-202ENSMUST00000055636 SphkapQ6NSW3 1687 aa9.98□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Sin3aQ60520 1274 aaKnown RBP9.98□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Arid3cA6PWV5 409 aa9.97□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Pkd2O35245 966 aa9.97□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Dhx57Q6P5D3 1388 aaKnown RBP9.97□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Abcc1O35379 1528 aa9.97□□□□□ -0.81
Clrn1-202ENSMUST00000055636 Ankrd36D3Z4K0 1415 aa9.96□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Mapkbp1Q6NS57 1503 aa9.96□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Rrp7aQ9D1C9 280 aaKnown RBP9.96□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Gm13697A2AK42 830 aa9.95□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Trak1Q6PD31 939 aa9.95□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Znf608Q56A10 1511 aa9.94□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Fancd2Q80V62 1450 aa9.94□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Trappc8E9PWG2 1437 aa9.93□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Supt16hQ920B9 1047 aa9.93□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Sart1Q9Z315 806 aaKnown RBP9.93□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Ttll5Q8CHB8 1328 aa9.92□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Ttbk1Q6PCN3 1308 aa9.92□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Kdm3bQ6ZPY7 1562 aa9.92□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Arhgap5P97393 1501 aa9.92□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Chd1P40201 1711 aa9.92□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Dhx9O70133 1380 aaKnown RBP9.92□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Rgl3Q3UYI5 709 aa9.91□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Amer1Q7TS75 1132 aa9.91□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Smg6P61406 1418 aaKnown RBP9.91□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Rrbp1Q99PL5 1605 aaKnown RBP9.91□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Ythdc2B2RR83 1445 aaKnown RBP9.91□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Usp47Q8BY87 1376 aa9.91□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Il16O54824 1322 aa9.91□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Rfx7F8VPJ6 1459 aa9.91□□□□□ -0.82
Clrn1-202ENSMUST00000055636 Slc24a1Q91WD8 1130 aa9.9□□□□□ -0.82
Clrn1-202ENSMUST00000055636 PrkcshO08795 521 aa9.9□□□□□ -0.83
Clrn1-202ENSMUST00000055636 AlkP97793 1621 aa9.9□□□□□ -0.83
Clrn1-202ENSMUST00000055636 CatipB9EKE5 520 aa9.89□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Mlh3A0A1Y7VMP7 1443 aa9.89□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Map4P27546 1125 aaKnown RBP9.89□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Naip5Q9R016 1403 aa9.89□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Nup155Q99P88 1391 aaKnown RBP9.88□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Cul7Q8VE73 1689 aa9.88□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Atp10dQ8K2X1 1416 aa9.88□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Washc2Q6PGL7 1334 aa9.87□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Rtl5Q5DTT4 599 aa9.87□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Map3k5O35099 1380 aa9.87□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Camsap2Q8C1B1 1461 aa9.87□□□□□ -0.83
Clrn1-202ENSMUST00000055636 PtprtQ99M80 1454 aa9.87□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Zbtb4Q5F293 982 aa9.86□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Grwd1Q810D6 446 aaKnown RBP9.86□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Pabpn1Q8CCS6 302 aaKnown RBP9.86□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Fam208aQ69ZR9 1610 aaKnown RBP9.86□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Supt6hQ62383 1726 aaKnown RBP9.86□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Caskin1Q6P9K8 1431 aa9.85□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Ppp4r2Q0VGB7 417 aa9.85□□□□□ -0.83
Clrn1-202ENSMUST00000055636 Wdr43Q6ZQL4 677 aaKnown RBP9.83□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Ssh2Q5SW75 1423 aa9.83□□□□□ -0.84
Clrn1-202ENSMUST00000055636 NhsB1AV60 1647 aa9.82□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Fhod3Q76LL6 1578 aa9.82□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Gapvd1Q6PAR5 1458 aa9.82□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Erich6D3Z6S9 713 aa9.82□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Eif5bQ05D44 1216 aaKnown RBP9.82□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Rprd2Q6NXI6 1469 aaKnown RBP9.82□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Pak3Q61036 559 aa9.81□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Setbp1Q9Z180 1582 aa9.81□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Pprc1Q6NZN1 1644 aa9.81□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Gm32742A0A1B0GT42 1604 aa9.8□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms