RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Adgrl3Q80TS3 1537 aa11.88□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Trpm2Q91YD4 1506 aa11.87□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Ccnb3Q810T2 1396 aa11.87□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Abcc1O35379 1528 aa11.87□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Kdm3bQ6ZPY7 1562 aa11.86□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Rnf17Q99MV7 1640 aa11.86□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Mast1Q9R1L5 1570 aa11.85□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Ncoa2Q61026 1462 aa11.85□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 AI481877A2ALV5 1481 aa11.84□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 AglF8VPN4 1532 aa11.84□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 Gm32742A0A1B0GT42 1604 aa11.84□□□□□ -0.51
Ccdc60-201ENSMUST00000050178 WrnO09053 1401 aa11.83□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Hecw1Q8K4P8 1604 aa11.83□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Zeb1Q64318 1117 aa11.83□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Magi1Q6RHR9 1471 aa11.82□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Abcc5Q9R1X5 1436 aa11.82□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Caskin1Q6P9K8 1431 aa11.81□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Mlh3A0A1Y7VMP7 1443 aa11.81□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Fmn2Q9JL04 1578 aa11.8□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Ccer2J3QPU5 274 aa11.8□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Il16O54824 1322 aa11.8□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Prex2Q3LAC4 1598 aa11.79□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 PtprtQ99M80 1454 aa11.79□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 AlkP97793 1621 aa11.79□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Ap3b1Q9Z1T1 1105 aa11.79□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Gapvd1Q6PAR5 1458 aa11.79□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 TonslQ6NZL6 1363 aa11.79□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Fam163aQ8CAA5 168 aa11.79□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Abca8bQ8K440 1620 aa11.78□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Dhx57Q6P5D3 1388 aaKnown RBP11.78□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Naip5Q9R016 1403 aa11.78□□□□□ -0.52
Ccdc60-201ENSMUST00000050178 Arhgap31A6X8Z5 1425 aa11.77□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Fancd2Q80V62 1450 aa11.76□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Sall2Q9QX96 1004 aa11.76□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Supt6hQ62383 1726 aaKnown RBP11.74□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Ak9G3UYQ4 1894 aa11.74□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Aebp2Q9Z248 504 aaKnown RBP11.73□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Abcc3B2RX12 1523 aa11.73□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Abca17E9PX95 1733 aa11.73□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Cfap74Q3UY96 1578 aa11.73□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Adgrl2Q8JZZ7 1487 aa11.73□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 ClspnQ80YR7 1315 aa11.73□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Plekhh2Q8C115 1491 aa11.72□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Adgrb2Q8CGM1 1561 aa11.72□□□□□ -0.53
Ccdc60-201ENSMUST00000050178 Mbd5B1AYB6 1498 aa11.71□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 DroshaQ5HZJ0 1373 aaKnown RBP11.71□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Rprd2Q6NXI6 1469 aaKnown RBP11.7□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Pik3c2gO70167 1506 aa11.69□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Cdc42bpbQ7TT50 1713 aa11.69□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Pabpn1Q8CCS6 302 aaKnown RBP11.68□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Robo2Q7TPD3 1470 aa11.67□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Las1lA2BE28 776 aaKnown RBP11.67□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Trpm1Q2TV84 1622 aa11.67□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Kidins220E9Q9B7 1793 aa11.67□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Kif14L0N7N1 1674 aaKnown RBP11.67□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Iqgap1Q9JKF1 1657 aaKnown RBP11.67□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Zmym4A2A791 1549 aaKnown RBP11.66□□□□□ -0.54
Ccdc60-201ENSMUST00000050178 Lrrc9Q8CDN9 1456 aa11.65□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Alpk3Q924C5 1678 aa11.64□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Lmod2Q3UHZ5 550 aa11.64□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Igf1rQ60751 1373 aa11.63□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Zfyve16Q80U44 1528 aa11.63□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Znf608Q56A10 1511 aa11.63□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Asxl1P59598 1514 aa11.62□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Arhgap27A2AB59 869 aa11.62□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Jph4Q80WT0 628 aa11.61□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Gm14025A2AP89 1413 aa11.61□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 PtprgQ05909 1442 aa11.61□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Abca9Q8K449 1623 aa11.6□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Xrn1P97789 1719 aaKnown RBP11.59□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Dot1lQ6XZL8 1540 aa11.59□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Tubgcp6G5E8P0 1769 aa11.59□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Tmem131lQ3U3D7 1597 aa11.59□□□□□ -0.55
Ccdc60-201ENSMUST00000050178 Prdm2A2A7B5 1709 aaKnown RBP11.58□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Kdm5aQ3UXZ9 1690 aa11.57□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Tdrd9Q14BI7 1383 aa11.56□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 ShprhQ7TPQ3 1674 aa11.56□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Myo5cE9Q1F5 1742 aa11.56□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Mtus2Q3UHD3 1353 aa11.55□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Setd1aE9PYH6 1716 aa11.55□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Gm13697A2AK42 830 aa11.55□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Ppip5k1A2ARP1 1436 aa11.55□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Mphosph9A6H5Y1 991 aa11.55□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Kdm5cP41230 1554 aa11.54□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Fndc1E9Q043 1732 aa11.54□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Cabp1Q9JLK7 227 aa11.54□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Ythdc2B2RR83 1445 aaKnown RBP11.54□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Talpid3E9PV87 1520 aa11.54□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Hecw2Q6I6G8 1578 aa11.53□□□□□ -0.56
Ccdc60-201ENSMUST00000050178 Hspa5P20029 655 aaKnown RBP11.51□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Ncoa1P70365 1447 aa11.51□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Ssh2Q5SW75 1423 aa11.51□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Cpsf1Q9EPU4 1441 aaKnown RBP11.51□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Cdk11bP24788 784 aaKnown RBP11.51□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Eid3Q3V124 375 aa11.51□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Topbp1Q6ZQF0 1515 aa11.5□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Cul9Q80TT8 1865 aa11.5□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Fam50aQ9WV03 339 aaKnown RBP11.5□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Arhgap5P97393 1501 aa11.5□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Rock1P70335 1354 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms