RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 PtprkP35822 1457 aa15.7■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Map3k1P53349 1493 aa15.7■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Ppp4r2Q0VGB7 417 aa15.7■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Mroh2bQ7M6Y6 1581 aa15.69■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Rtl5Q5DTT4 599 aa15.69■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Crocc2F6XLV1 1638 aa15.69■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Sin3aQ60520 1274 aaKnown RBP15.69■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Gtf2e1Q9D0D5 440 aa15.69■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Plb1Q3TTY0 1478 aa15.68■□□□□ 0.1
Pcif1-201ENSMUST00000041643 ArxO35085 564 aa15.68■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Tdrd9Q14BI7 1383 aa15.67■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Fhad1A6PWD2 1420 aa15.67■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Ift140E9PY46 1464 aa15.66■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Psme1P97371 249 aa15.66■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Irx6Q9ER75 438 aa15.65■□□□□ 0.1
Pcif1-201ENSMUST00000041643 Arid4bA2CG63 1314 aaKnown RBP15.64■□□□□ 0.09
Pcif1-201ENSMUST00000041643 MlecQ6ZQI3 291 aaKnown RBP15.64■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Mapk8ip3Q9ESN9 1337 aa15.64■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Neurod2Q62414 383 aa15.64■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Fgd1P52734 960 aa15.63■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Spag9Q58A65 1321 aaKnown RBP15.63■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Txndc2Q6P902 515 aa15.62■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Naip1Q9QWK5 1403 aa15.61■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Arap1Q4LDD4 1452 aa15.61■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Rock2P70336 1388 aa15.61■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Arhgap31A6X8Z5 1425 aa15.61■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Fgd6Q69ZL1 1399 aa15.61■□□□□ 0.09
Pcif1-201ENSMUST00000041643 EprsQ8CGC7 1512 aaKnown RBP15.6■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Usp47Q8BY87 1376 aa15.6■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Wwc2Q6NXJ0 1187 aa15.6■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Tmf1B9EKI3 1091 aa15.59■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Arhgef5E9Q7D5 1581 aa15.59■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Rsph4aQ8BYM7 716 aa15.58■□□□□ 0.09
Pcif1-201ENSMUST00000041643 Wdr43Q6ZQL4 677 aaKnown RBP15.58■□□□□ 0.08
Pcif1-201ENSMUST00000041643 Apbb1Q9QXJ1 710 aa15.56■□□□□ 0.08
Pcif1-201ENSMUST00000041643 Ccdc141E9Q8Q6 1531 aa15.56■□□□□ 0.08
Pcif1-201ENSMUST00000041643 Arhgap5P97393 1501 aa15.56■□□□□ 0.08
Pcif1-201ENSMUST00000041643 Dnajc5bQ9CQ94 199 aa15.56■□□□□ 0.08
Pcif1-201ENSMUST00000041643 SynmQ70IV5 1561 aa15.55■□□□□ 0.08
Pcif1-201ENSMUST00000041643 TchhA0A0B4J1F9 1599 aa15.54■□□□□ 0.08
Pcif1-201ENSMUST00000041643 Myt1Q8CFC2 1127 aa15.53■□□□□ 0.08
Pcif1-201ENSMUST00000041643 Srcin1Q9QWI6 1250 aa15.53■□□□□ 0.08
Pcif1-201ENSMUST00000041643 Fan1Q69ZT1 1020 aa15.53■□□□□ 0.08
Pcif1-201ENSMUST00000041643 AqrQ8CFQ3 1481 aaKnown RBP15.52■□□□□ 0.08
Pcif1-201ENSMUST00000041643 Exoc6Q8R313 802 aa15.51■□□□□ 0.07
Pcif1-201ENSMUST00000041643 Tiam1Q60610 1591 aa15.51■□□□□ 0.07
Pcif1-201ENSMUST00000041643 Aplp2Q06335 707 aa15.51■□□□□ 0.07
Pcif1-201ENSMUST00000041643 Iqcf3Q9D498 203 aa15.51■□□□□ 0.07
Pcif1-201ENSMUST00000041643 Gm14025A2AP89 1413 aa15.5■□□□□ 0.07
Pcif1-201ENSMUST00000041643 CadpsQ80TJ1 1355 aa15.5■□□□□ 0.07
Pcif1-201ENSMUST00000041643 Vps8Q0P5W1 1427 aa15.49■□□□□ 0.07
Pcif1-201ENSMUST00000041643 Dcaf11Q91VU6 549 aa15.48■□□□□ 0.07
Pcif1-201ENSMUST00000041643 Gm6268A2A3U9 297 aa15.47■□□□□ 0.07
Pcif1-201ENSMUST00000041643 Sox12Q04890 314 aa15.47■□□□□ 0.07
Pcif1-201ENSMUST00000041643 Znf316Q6PGE4 1016 aa15.47■□□□□ 0.07
Pcif1-201ENSMUST00000041643 DaxxO35613 739 aa15.46■□□□□ 0.07
Pcif1-201ENSMUST00000041643 Grin2aP35436 1464 aa15.46■□□□□ 0.07
Pcif1-201ENSMUST00000041643 Zfp777B9EKF4 885 aa15.45■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Pcf11G3X9Z4 1553 aa15.45■□□□□ 0.06
Pcif1-201ENSMUST00000041643 CenpjQ569L8 1344 aa15.45■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Ankrd36D3Z4K0 1415 aa15.44■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Zfp644E9QA22 1323 aa15.44■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Stard8Q8K031 1019 aa15.44■□□□□ 0.06
Pcif1-201ENSMUST00000041643 1700019A02RikA0A087WPV9 146 aa15.43■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Slc4a1apE9PX68 744 aa15.43■□□□□ 0.06
Pcif1-201ENSMUST00000041643 NudcO35685 332 aaKnown RBP15.43■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Prdm16A2A935 1275 aa15.42■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Ncapd3Q6ZQK0 1506 aa15.42■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Utp14aQ640M1 767 aaKnown RBP15.42■□□□□ 0.06
Pcif1-201ENSMUST00000041643 ErbinQ80TH2 1402 aa15.42■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Birc3O08863 600 aa15.42■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Map3k5O35099 1380 aa15.42■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Ecm2Q5FW85 670 aa15.41■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Neo1P97798 1493 aa15.41■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Shq1Q7TMX5 569 aa15.41■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Pde4cQ3UEI1 686 aa15.4■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Nsd2Q8BVE8 1365 aa15.4■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Plin1Q8CGN5 517 aa15.4■□□□□ 0.06
Pcif1-201ENSMUST00000041643 Usp40Q8BWR4 1235 aa15.39■□□□□ 0.05
Pcif1-201ENSMUST00000041643 Speer4f1Q9D5Q6 258 aa15.39■□□□□ 0.05
Pcif1-201ENSMUST00000041643 Zscan21Q07231 555 aa15.38■□□□□ 0.05
Pcif1-201ENSMUST00000041643 U2af1Q9D883 239 aaKnown RBP15.38■□□□□ 0.05
Pcif1-201ENSMUST00000041643 Dapk1Q80YE7 1442 aa15.38■□□□□ 0.05
Pcif1-201ENSMUST00000041643 Fam163aQ8CAA5 168 aa15.37■□□□□ 0.05
Pcif1-201ENSMUST00000041643 NexmifQ5DTT1 1515 aa15.37■□□□□ 0.05
Pcif1-201ENSMUST00000041643 Pank3Q8R2W9 370 aa15.36■□□□□ 0.05
Pcif1-201ENSMUST00000041643 Fam135aQ6NS59 1506 aa15.35■□□□□ 0.05
Pcif1-201ENSMUST00000041643 Trim30dE9PWL0 497 aa15.35■□□□□ 0.05
Pcif1-201ENSMUST00000041643 Rtf1A2AQ19 715 aaKnown RBP15.34■□□□□ 0.05
Pcif1-201ENSMUST00000041643 Golga2Q921M4 999 aa15.34■□□□□ 0.05
Pcif1-201ENSMUST00000041643 Mug1P28665 1476 aa15.34■□□□□ 0.05
Pcif1-201ENSMUST00000041643 Ankrd26Q811D2 1581 aa15.33■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Cd109Q8R422 1442 aa15.33■□□□□ 0.04
Pcif1-201ENSMUST00000041643 TnnQ80Z71 1560 aa15.33■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Magi1Q6RHR9 1471 aa15.32■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Mak16Q8BGS0 296 aaKnown RBP15.32■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Armcx1Q9CX83 456 aa15.32■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Rwdd1Q9CQK7 243 aa15.32■□□□□ 0.04
Pcif1-201ENSMUST00000041643 U2surpQ6NV83 1029 aaKnown RBP15.32■□□□□ 0.04
Pcif1-201ENSMUST00000041643 Hsp90ab1P11499 724 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms