RNA–Protein interactions for RNA: ENSMUST00000035661.6

Cspg4-201, Transcript of Chondroitin sulfate proteoglycan 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cspg4, Length 8,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4-201ENSMUST00000035661 Irx6Q9ER75 438 aa12.72□□□□□ -0.37
Cspg4-201ENSMUST00000035661 Fhad1A6PWD2 1420 aa12.72□□□□□ -0.37
Cspg4-201ENSMUST00000035661 Mroh2bQ7M6Y6 1581 aa12.71□□□□□ -0.37
Cspg4-201ENSMUST00000035661 Urb2E9Q7L1 1524 aaKnown RBP12.71□□□□□ -0.37
Cspg4-201ENSMUST00000035661 PogzQ8BZH4 1409 aaKnown RBP12.71□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Irx3P81067 507 aa12.7□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Ift140E9PY46 1464 aa12.7□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Soga1E1U8D0 1418 aa12.69□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Mphosph9A6H5Y1 991 aa12.69□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Bcl11aQ9QYE3 773 aa12.69□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Cabp1Q9JLK7 227 aa12.69□□□□□ -0.38
Cspg4-201ENSMUST00000035661 AU015836B2RUM3 263 aa12.69□□□□□ -0.38
Cspg4-201ENSMUST00000035661 MyclP10166 368 aa12.69□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Nup155Q99P88 1391 aaKnown RBP12.68□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Clstn1Q9EPL2 979 aa12.68□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Fgd1P52734 960 aa12.67□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Stag3O70576 1240 aa12.67□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Calcoco2A2A6M5 331 aa12.67□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Stk24Q99KH8 431 aa12.67□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Slc4a1apE9PX68 744 aa12.66□□□□□ -0.38
Cspg4-201ENSMUST00000035661 AqrQ8CFQ3 1481 aaKnown RBP12.66□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Ppm1gQ61074 542 aa12.66□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Cc2d2bA0A286YDU8 1405 aa12.65□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Hspa5P20029 655 aaKnown RBP12.65□□□□□ -0.38
Cspg4-201ENSMUST00000035661 Stard8Q8K031 1019 aa12.64□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Rtn4Q99P72 1162 aaKnown RBP12.64□□□□□ -0.39
Cspg4-201ENSMUST00000035661 TchhA0A0B4J1F9 1599 aa12.64□□□□□ -0.39
Cspg4-201ENSMUST00000035661 SynmQ70IV5 1561 aa12.64□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Rock2P70336 1388 aa12.63□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Arid3cA6PWV5 409 aa12.63□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Pabpn1Q8CCS6 302 aaKnown RBP12.63□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Ankrd36D3Z4K0 1415 aa12.63□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Trak1Q6PD31 939 aa12.63□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Vsig10D3YX43 558 aa12.63□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Aebp2Q9Z248 504 aaKnown RBP12.63□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Fam71e1A1L3C1 212 aa12.62□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Arhgef5E9Q7D5 1581 aa12.62□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Trim30dE9PWL0 497 aa12.62□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Rad21Q61550 635 aaKnown RBP12.62□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Tiam1Q60610 1591 aa12.62□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Gm7298A0A0N4SVU1 1476 aa12.62□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Rad54l2Q99NG0 1466 aa12.62□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Jph4Q80WT0 628 aa12.6□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Iqcf3Q9D498 203 aa12.6□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Ccdc141E9Q8Q6 1531 aa12.6□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Tmf1B9EKI3 1091 aa12.59□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Rundc1Q0VDN7 615 aa12.59□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Ofd1Q80Z25 1017 aa12.59□□□□□ -0.39
Cspg4-201ENSMUST00000035661 Plcb2A3KGF7 1181 aa12.58□□□□□ -0.4
Cspg4-201ENSMUST00000035661 SetQ9EQU5 289 aaKnown RBP12.58□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Chmp4bQ9D8B3 224 aaKnown RBP12.58□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Mapk8ip3Q9ESN9 1337 aa12.57□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Vps8Q0P5W1 1427 aa12.57□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Sart1Q9Z315 806 aaKnown RBP12.57□□□□□ -0.4
Cspg4-201ENSMUST00000035661 PnnO35691 725 aaKnown RBP12.56□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Gtf2e1Q9D0D5 440 aa12.56□□□□□ -0.4
Cspg4-201ENSMUST00000035661 EprsQ8CGC7 1512 aaKnown RBP12.56□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Ifit1bl1D3Z6F0 470 aa12.56□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Ggt6Q6PDE7 497 aa12.56□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Znf316Q6PGE4 1016 aa12.56□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Casc1Q6TDU8 730 aa12.55□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Naip1Q9QWK5 1403 aa12.55□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Mak16Q8BGS0 296 aaKnown RBP12.55□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Arhgap5P97393 1501 aa12.54□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Kif3bQ61771 747 aa12.54□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Fgd6Q69ZL1 1399 aa12.54□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Gm973E9Q295 1059 aa12.54□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Map7d2A2AG50 781 aa12.54□□□□□ -0.4
Cspg4-201ENSMUST00000035661 1700123L14RikQ3V2K7 440 aa12.54□□□□□ -0.4
Cspg4-201ENSMUST00000035661 MsnP26041 577 aaKnown RBP12.53□□□□□ -0.4
Cspg4-201ENSMUST00000035661 PtmsQ9D0J8 101 aaKnown RBP12.53□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Map7O88735 730 aa12.53□□□□□ -0.4
Cspg4-201ENSMUST00000035661 TnnQ80Z71 1560 aa12.53□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Usp47Q8BY87 1376 aa12.52□□□□□ -0.4
Cspg4-201ENSMUST00000035661 Arap1Q4LDD4 1452 aa12.51□□□□□ -0.41
Cspg4-201ENSMUST00000035661 NudcO35685 332 aaKnown RBP12.51□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Spag9Q58A65 1321 aaKnown RBP12.51□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Mbd3Q9Z2D8 285 aaKnown RBP12.51□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Arhgap31A6X8Z5 1425 aa12.5□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Nsd2Q8BVE8 1365 aa12.5□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Prdm16A2A935 1275 aa12.49□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Fam135aQ6NS59 1506 aa12.49□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Pcf11G3X9Z4 1553 aa12.49□□□□□ -0.41
Cspg4-201ENSMUST00000035661 CadpsQ80TJ1 1355 aa12.49□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Prm3Q62100 101 aa12.49□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Plb1Q3TTY0 1478 aa12.48□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Tdrd9Q14BI7 1383 aa12.47□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Srcin1Q9QWI6 1250 aa12.47□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Psme1P97371 249 aa12.47□□□□□ -0.41
Cspg4-201ENSMUST00000035661 4933402E13RikQ9D4D2 429 aa12.47□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Gm14025A2AP89 1413 aa12.47□□□□□ -0.41
Cspg4-201ENSMUST00000035661 Pbrm1Q8BSQ9 1634 aaKnown RBP12.46□□□□□ -0.41
Cspg4-201ENSMUST00000035661 PtprkP35822 1457 aa12.46□□□□□ -0.42
Cspg4-201ENSMUST00000035661 Rrp12Q6P5B0 1295 aaKnown RBP12.46□□□□□ -0.42
Cspg4-201ENSMUST00000035661 Q8BT18 775 aa12.46□□□□□ -0.42
Cspg4-201ENSMUST00000035661 Grin2aP35436 1464 aa12.45□□□□□ -0.42
Cspg4-201ENSMUST00000035661 Noc3lQ8VI84 807 aaKnown RBP12.45□□□□□ -0.42
Cspg4-201ENSMUST00000035661 Trim26Q99PN3 545 aa12.44□□□□□ -0.42
Cspg4-201ENSMUST00000035661 Fam163aQ8CAA5 168 aa12.44□□□□□ -0.42
Cspg4-201ENSMUST00000035661 NgefQ8CHT1 710 aa12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 61.4 ms