RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Fam50aQ9WV03 339 aaKnown RBP13.27□□□□□ -0.29
Copb1-201ENSMUST00000033012 NrkQ9R0G8 1455 aa13.27□□□□□ -0.29
Copb1-201ENSMUST00000033012 Phf14Q9D4H9 881 aa13.26□□□□□ -0.29
Copb1-201ENSMUST00000033012 Dnai1Q8C0M8 701 aa13.26□□□□□ -0.29
Copb1-201ENSMUST00000033012 3425401B19RikD3Z1D3 1412 aa13.25□□□□□ -0.29
Copb1-201ENSMUST00000033012 Disp1Q3TDN0 1521 aa13.24□□□□□ -0.29
Copb1-201ENSMUST00000033012 Ttll13A4Q9F6 804 aa13.24□□□□□ -0.29
Copb1-201ENSMUST00000033012 Zbtb4Q5F293 982 aa13.23□□□□□ -0.29
Copb1-201ENSMUST00000033012 Slx4Q6P1D7 1565 aa13.23□□□□□ -0.29
Copb1-201ENSMUST00000033012 Armcx1Q9CX83 456 aa13.23□□□□□ -0.29
Copb1-201ENSMUST00000033012 AqrQ8CFQ3 1481 aaKnown RBP13.23□□□□□ -0.29
Copb1-201ENSMUST00000033012 BlmO88700 1416 aa13.23□□□□□ -0.29
Copb1-201ENSMUST00000033012 4933402E13RikQ9D4D2 429 aa13.22□□□□□ -0.29
Copb1-201ENSMUST00000033012 Erbb3Q61526 1339 aa13.22□□□□□ -0.29
Copb1-201ENSMUST00000033012 Map3k1P53349 1493 aa13.22□□□□□ -0.29
Copb1-201ENSMUST00000033012 Fhod3Q76LL6 1578 aa13.2□□□□□ -0.3
Copb1-201ENSMUST00000033012 Ppm1gQ61074 542 aa13.19□□□□□ -0.3
Copb1-201ENSMUST00000033012 Dhx57Q6P5D3 1388 aaKnown RBP13.18□□□□□ -0.3
Copb1-201ENSMUST00000033012 Tex2Q6ZPJ0 1128 aaKnown RBP13.17□□□□□ -0.3
Copb1-201ENSMUST00000033012 Chrna2Q91X60 512 aa13.17□□□□□ -0.3
Copb1-201ENSMUST00000033012 Rbm10Q99KG3 930 aaKnown RBP13.17□□□□□ -0.3
Copb1-201ENSMUST00000033012 Naip2Q9QUK4 1447 aa13.17□□□□□ -0.3
Copb1-201ENSMUST00000033012 Pcf11G3X9Z4 1553 aa13.17□□□□□ -0.3
Copb1-201ENSMUST00000033012 NudcO35685 332 aaKnown RBP13.16□□□□□ -0.3
Copb1-201ENSMUST00000033012 Abca5Q8K448 1642 aa13.15□□□□□ -0.3
Copb1-201ENSMUST00000033012 Cul9Q80TT8 1865 aa13.15□□□□□ -0.3
Copb1-201ENSMUST00000033012 Ankrd26Q811D2 1581 aa13.15□□□□□ -0.3
Copb1-201ENSMUST00000033012 PtprkP35822 1457 aa13.15□□□□□ -0.3
Copb1-201ENSMUST00000033012 Dusp27Q148W8 1138 aa13.15□□□□□ -0.31
Copb1-201ENSMUST00000033012 Nom1Q3UFM5 854 aaKnown RBP13.15□□□□□ -0.31
Copb1-201ENSMUST00000033012 Peg3Q3URU2 1571 aa13.14□□□□□ -0.31
Copb1-201ENSMUST00000033012 TnnQ80Z71 1560 aa13.13□□□□□ -0.31
Copb1-201ENSMUST00000033012 Anp32bQ9EST5 272 aaKnown RBP13.13□□□□□ -0.31
Copb1-201ENSMUST00000033012 Dennd4bQ3U1Y4 1499 aa13.12□□□□□ -0.31
Copb1-201ENSMUST00000033012 Zfp91Q62511 572 aa13.12□□□□□ -0.31
Copb1-201ENSMUST00000033012 Paxip1Q6NZQ4 1056 aa13.11□□□□□ -0.31
Copb1-201ENSMUST00000033012 Zmym3Q9JLM4 1370 aa13.11□□□□□ -0.31
Copb1-201ENSMUST00000033012 Lmo7E9PYF4 1699 aaKnown RBP13.11□□□□□ -0.31
Copb1-201ENSMUST00000033012 SynmQ70IV5 1561 aa13.1□□□□□ -0.31
Copb1-201ENSMUST00000033012 Plppr3Q7TPB0 716 aa13.1□□□□□ -0.31
Copb1-201ENSMUST00000033012 Htatsf1Q8BGC0 757 aa13.1□□□□□ -0.31
Copb1-201ENSMUST00000033012 EspnQ9ET47 871 aa13.1□□□□□ -0.31
Copb1-201ENSMUST00000033012 Setbp1Q9Z180 1582 aa13.09□□□□□ -0.31
Copb1-201ENSMUST00000033012 Arhgef12Q8R4H2 1543 aaKnown RBP13.09□□□□□ -0.31
Copb1-201ENSMUST00000033012 Kdm2bQ6P1G2 1309 aa13.08□□□□□ -0.32
Copb1-201ENSMUST00000033012 Rrp12Q6P5B0 1295 aaKnown RBP13.08□□□□□ -0.32
Copb1-201ENSMUST00000033012 BicraF8VPZ9 1578 aa13.07□□□□□ -0.32
Copb1-201ENSMUST00000033012 Plekhg5Q66T02 1073 aa13.07□□□□□ -0.32
Copb1-201ENSMUST00000033012 Mbd3Q9Z2D8 285 aaKnown RBP13.07□□□□□ -0.32
Copb1-201ENSMUST00000033012 Rock2P70336 1388 aa13.07□□□□□ -0.32
Copb1-201ENSMUST00000033012 PogkQ80TC5 607 aa13.07□□□□□ -0.32
Copb1-201ENSMUST00000033012 Kif21bQ9QXL1 1668 aa13.06□□□□□ -0.32
Copb1-201ENSMUST00000033012 B4galnt3Q6L8S8 986 aa13.06□□□□□ -0.32
Copb1-201ENSMUST00000033012 Ak9G3UYQ4 1894 aa13.06□□□□□ -0.32
Copb1-201ENSMUST00000033012 Myom3A2ABU4 1439 aa13.06□□□□□ -0.32
Copb1-201ENSMUST00000033012 Tmc1Q8R4P5 757 aa13.06□□□□□ -0.32
Copb1-201ENSMUST00000033012 Zbtb7cQ8VCZ7 619 aa13.05□□□□□ -0.32
Copb1-201ENSMUST00000033012 Tpm2P58774 284 aa13.04□□□□□ -0.32
Copb1-201ENSMUST00000033012 Clcn1Q64347 994 aa13.04□□□□□ -0.32
Copb1-201ENSMUST00000033012 Shroom4Q1W617 1475 aa13.04□□□□□ -0.32
Copb1-201ENSMUST00000033012 Ppp1r9bQ6R891 817 aaKnown RBP13.04□□□□□ -0.32
Copb1-201ENSMUST00000033012 TimelessQ9R1X4 1197 aa13.03□□□□□ -0.32
Copb1-201ENSMUST00000033012 Vgll3P85442 326 aa13.02□□□□□ -0.32
Copb1-201ENSMUST00000033012 Zfp444Q3TDV8 331 aaKnown RBP13.02□□□□□ -0.32
Copb1-201ENSMUST00000033012 Eif2s2Q99L45 331 aaKnown RBP13.02□□□□□ -0.32
Copb1-201ENSMUST00000033012 Irf5P56477 497 aa13.01□□□□□ -0.33
Copb1-201ENSMUST00000033012 A2mQ6GQT1 1474 aa13.01□□□□□ -0.33
Copb1-201ENSMUST00000033012 Gm7298A0A0N4SVU1 1476 aa13□□□□□ -0.33
Copb1-201ENSMUST00000033012 Stard8Q8K031 1019 aa13□□□□□ -0.33
Copb1-201ENSMUST00000033012 Rprd2Q6NXI6 1469 aaKnown RBP13□□□□□ -0.33
Copb1-201ENSMUST00000033012 Mtus2Q3UHD3 1353 aa12.99□□□□□ -0.33
Copb1-201ENSMUST00000033012 Ttc41Q692V3 1318 aa12.99□□□□□ -0.33
Copb1-201ENSMUST00000033012 Chmp5Q9D7S9 219 aa12.99□□□□□ -0.33
Copb1-201ENSMUST00000033012 Unc13aQ4KUS2 1712 aa12.98□□□□□ -0.33
Copb1-201ENSMUST00000033012 Cux1P53564 1515 aa12.98□□□□□ -0.33
Copb1-201ENSMUST00000033012 Ipo8Q7TMY7 1010 aa12.98□□□□□ -0.33
Copb1-201ENSMUST00000033012 Fam43aQ8BUP8 424 aa12.98□□□□□ -0.33
Copb1-201ENSMUST00000033012 Antxr1Q9CZ52 562 aa12.97□□□□□ -0.33
Copb1-201ENSMUST00000033012 Cwc22Q8C5N3 908 aaKnown RBP12.96□□□□□ -0.33
Copb1-201ENSMUST00000033012 Usp47Q8BY87 1376 aa12.96□□□□□ -0.34
Copb1-201ENSMUST00000033012 Mroh2bQ7M6Y6 1581 aa12.96□□□□□ -0.34
Copb1-201ENSMUST00000033012 Smc5Q8CG46 1101 aaKnown RBP12.95□□□□□ -0.34
Copb1-201ENSMUST00000033012 Dbr1Q923B1 550 aa12.95□□□□□ -0.34
Copb1-201ENSMUST00000033012 Il4rP16382 810 aa12.95□□□□□ -0.34
Copb1-201ENSMUST00000033012 Ddrgk1Q80WW9 315 aa12.95□□□□□ -0.34
Copb1-201ENSMUST00000033012 Hsp90ab1P11499 724 aaKnown RBP12.94□□□□□ -0.34
Copb1-201ENSMUST00000033012 Mak16Q8BGS0 296 aaKnown RBP12.94□□□□□ -0.34
Copb1-201ENSMUST00000033012 Lmod2Q3UHZ5 550 aa12.94□□□□□ -0.34
Copb1-201ENSMUST00000033012 Ak7Q9D2H2 614 aa12.94□□□□□ -0.34
Copb1-201ENSMUST00000033012 Mphosph9A6H5Y1 991 aa12.93□□□□□ -0.34
Copb1-201ENSMUST00000033012 Lekr1B2RVN1 116 aa12.93□□□□□ -0.34
Copb1-201ENSMUST00000033012 Dhx30Q99PU8 1217 aaKnown RBP12.93□□□□□ -0.34
Copb1-201ENSMUST00000033012 Mapk8ip3Q9ESN9 1337 aa12.93□□□□□ -0.34
Copb1-201ENSMUST00000033012 Spryd3E9Q9B3 442 aa12.92□□□□□ -0.34
Copb1-201ENSMUST00000033012 Mcm4P49717 862 aa12.92□□□□□ -0.34
Copb1-201ENSMUST00000033012 Ripk4Q9ERK0 786 aa12.91□□□□□ -0.34
Copb1-201ENSMUST00000033012 IbspQ61711 324 aa12.91□□□□□ -0.34
Copb1-201ENSMUST00000033012 Naip6Q9JIB6 1403 aa12.91□□□□□ -0.34
Copb1-201ENSMUST00000033012 Mbd5B1AYB6 1498 aa12.9□□□□□ -0.34
Copb1-201ENSMUST00000033012 Isy1Q69ZQ2 285 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms