RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Kdm6bQ5NCY0 1641 aa29.7■■■□□ 2.35
Cdx1-201ENSMUST00000025521 Chic2Q9D9G3 165 aa29.67■■■□□ 2.34
Cdx1-201ENSMUST00000025521 Fam163aQ8CAA5 168 aa29.67■■■□□ 2.34
Cdx1-201ENSMUST00000025521 Hspa5P20029 655 aaKnown RBP29.63■■■□□ 2.33
Cdx1-201ENSMUST00000025521 Lamc1P02468 1607 aaKnown RBP29.63■■■□□ 2.33
Cdx1-201ENSMUST00000025521 Il16O54824 1322 aa29.63■■■□□ 2.33
Cdx1-201ENSMUST00000025521 Kdm3bQ6ZPY7 1562 aa29.62■■■□□ 2.33
Cdx1-201ENSMUST00000025521 Naip5Q9R016 1403 aa29.62■■■□□ 2.33
Cdx1-201ENSMUST00000025521 Kif21bQ9QXL1 1668 aa29.6■■■□□ 2.33
Cdx1-201ENSMUST00000025521 SphkapQ6NSW3 1687 aa29.6■■■□□ 2.33
Cdx1-201ENSMUST00000025521 Arhgef12Q8R4H2 1543 aaKnown RBP29.6■■■□□ 2.33
Cdx1-201ENSMUST00000025521 Nop58Q6DFW4 536 aaKnown RBP29.59■■■□□ 2.33
Cdx1-201ENSMUST00000025521 Mtus2Q3UHD3 1353 aa29.58■■■□□ 2.33
Cdx1-201ENSMUST00000025521 Prex2Q3LAC4 1598 aa29.57■■■□□ 2.32
Cdx1-201ENSMUST00000025521 Cabp1Q9JLK7 227 aa29.57■■■□□ 2.32
Cdx1-201ENSMUST00000025521 Mlh3A0A1Y7VMP7 1443 aa29.56■■■□□ 2.32
Cdx1-201ENSMUST00000025521 Neo1P97798 1493 aa29.56■■■□□ 2.32
Cdx1-201ENSMUST00000025521 Cdk11bP24788 784 aaKnown RBP29.55■■■□□ 2.32
Cdx1-201ENSMUST00000025521 NclP09405 707 aaKnown RBP29.54■■■□□ 2.32
Cdx1-201ENSMUST00000025521 Caskin1Q6P9K8 1431 aa29.53■■■□□ 2.32
Cdx1-201ENSMUST00000025521 Ppargc1bQ8VHJ7 1014 aa29.53■■■□□ 2.32
Cdx1-201ENSMUST00000025521 Mphosph9A6H5Y1 991 aa29.52■■■□□ 2.32
Cdx1-201ENSMUST00000025521 Fgd6Q69ZL1 1399 aa29.51■■■□□ 2.32
Cdx1-201ENSMUST00000025521 Gm13697A2AK42 830 aa29.5■■■□□ 2.31
Cdx1-201ENSMUST00000025521 Ube2uB1AUC4 352 aa29.49■■■□□ 2.31
Cdx1-201ENSMUST00000025521 Fam208aQ69ZR9 1610 aaKnown RBP29.48■■■□□ 2.31
Cdx1-201ENSMUST00000025521 Anks4bQ8K3X6 423 aa29.48■■■□□ 2.31
Cdx1-201ENSMUST00000025521 Jph4Q80WT0 628 aa29.47■■■□□ 2.31
Cdx1-201ENSMUST00000025521 Fancd2Q80V62 1450 aa29.46■■■□□ 2.31
Cdx1-201ENSMUST00000025521 AlkP97793 1621 aa29.44■■■□□ 2.3
Cdx1-201ENSMUST00000025521 Adgrb2Q8CGM1 1561 aa29.41■■■□□ 2.3
Cdx1-201ENSMUST00000025521 Rprd2Q6NXI6 1469 aaKnown RBP29.41■■■□□ 2.3
Cdx1-201ENSMUST00000025521 Kiaa1210E9Q0C6 1637 aa29.38■■■□□ 2.29
Cdx1-201ENSMUST00000025521 Fmn2Q9JL04 1578 aa29.35■■■□□ 2.29
Cdx1-201ENSMUST00000025521 AknaQ80VW7 1404 aa29.35■■■□□ 2.29
Cdx1-201ENSMUST00000025521 Pik3c2gO70167 1506 aa29.33■■■□□ 2.29
Cdx1-201ENSMUST00000025521 Rnf17Q99MV7 1640 aa29.33■■■□□ 2.29
Cdx1-201ENSMUST00000025521 Trpm2Q91YD4 1506 aa29.33■■■□□ 2.29
Cdx1-201ENSMUST00000025521 Pdcd11Q6NS46 1862 aaKnown RBP29.32■■■□□ 2.28
Cdx1-201ENSMUST00000025521 Pprc1Q6NZN1 1644 aa29.32■■■□□ 2.28
Cdx1-201ENSMUST00000025521 Wdr7Q920I9 1489 aa29.3■■■□□ 2.28
Cdx1-201ENSMUST00000025521 Gm14025A2AP89 1413 aa29.3■■■□□ 2.28
Cdx1-201ENSMUST00000025521 Chd1P40201 1711 aa29.3■■■□□ 2.28
Cdx1-201ENSMUST00000025521 Tdrd9Q14BI7 1383 aa29.29■■■□□ 2.28
Cdx1-201ENSMUST00000025521 Zfp644E9QA22 1323 aa29.28■■■□□ 2.28
Cdx1-201ENSMUST00000025521 Pkd2O35245 966 aa29.27■■■□□ 2.28
Cdx1-201ENSMUST00000025521 Usp47Q8BY87 1376 aa29.27■■■□□ 2.28
Cdx1-201ENSMUST00000025521 Gm32742A0A1B0GT42 1604 aa29.26■■■□□ 2.27
Cdx1-201ENSMUST00000025521 NhsB1AV60 1647 aa29.26■■■□□ 2.27
Cdx1-201ENSMUST00000025521 Neurl4Q5NCX5 1563 aa29.25■■■□□ 2.27
Cdx1-201ENSMUST00000025521 Supt6hQ62383 1726 aaKnown RBP29.25■■■□□ 2.27
Cdx1-201ENSMUST00000025521 Adgrl2Q8JZZ7 1487 aa29.24■■■□□ 2.27
Cdx1-201ENSMUST00000025521 Mast1Q9R1L5 1570 aa29.23■■■□□ 2.27
Cdx1-201ENSMUST00000025521 Abcc1O35379 1528 aa29.2■■■□□ 2.27
Cdx1-201ENSMUST00000025521 DroshaQ5HZJ0 1373 aaKnown RBP29.2■■■□□ 2.27
Cdx1-201ENSMUST00000025521 Cfap74Q3UY96 1578 aa29.2■■■□□ 2.26
Cdx1-201ENSMUST00000025521 Hecw1Q8K4P8 1604 aa29.17■■■□□ 2.26
Cdx1-201ENSMUST00000025521 Arhgap5P97393 1501 aa29.13■■■□□ 2.25
Cdx1-201ENSMUST00000025521 Abca8bQ8K440 1620 aa29.1■■■□□ 2.25
Cdx1-201ENSMUST00000025521 Lrrc9Q8CDN9 1456 aa29.1■■■□□ 2.25
Cdx1-201ENSMUST00000025521 Kif14L0N7N1 1674 aaKnown RBP29.1■■■□□ 2.25
Cdx1-201ENSMUST00000025521 Ttll5Q8CHB8 1328 aa29.07■■■□□ 2.24
Cdx1-201ENSMUST00000025521 Fkbp15Q6P9Q6 1216 aaKnown RBP29.07■■■□□ 2.24
Cdx1-201ENSMUST00000025521 Nup155Q99P88 1391 aaKnown RBP29.07■■■□□ 2.24
Cdx1-201ENSMUST00000025521 Mbd5B1AYB6 1498 aa29.06■■■□□ 2.24
Cdx1-201ENSMUST00000025521 Abcc3B2RX12 1523 aa29.04■■■□□ 2.24
Cdx1-201ENSMUST00000025521 Ncoa1P70365 1447 aa29.02■■■□□ 2.24
Cdx1-201ENSMUST00000025521 Dhx9O70133 1380 aaKnown RBP29■■■□□ 2.23
Cdx1-201ENSMUST00000025521 PtprgQ05909 1442 aa28.99■■■□□ 2.23
Cdx1-201ENSMUST00000025521 Trappc8E9PWG2 1437 aa28.97■■■□□ 2.23
Cdx1-201ENSMUST00000025521 Sin3aQ60520 1274 aaKnown RBP28.96■■■□□ 2.23
Cdx1-201ENSMUST00000025521 Ssh2Q5SW75 1423 aa28.96■■■□□ 2.23
Cdx1-201ENSMUST00000025521 Cdc42bpbQ7TT50 1713 aa28.95■■■□□ 2.23
Cdx1-201ENSMUST00000025521 Smg6P61406 1418 aaKnown RBP28.93■■■□□ 2.22
Cdx1-201ENSMUST00000025521 Atp10dQ8K2X1 1416 aa28.93■■■□□ 2.22
Cdx1-201ENSMUST00000025521 Trak1Q6PD31 939 aa28.93■■■□□ 2.22
Cdx1-201ENSMUST00000025521 Clstn2Q9ER65 966 aa28.92■■■□□ 2.22
Cdx1-201ENSMUST00000025521 Mapk8ip2Q9ERE9 830 aa28.92■■■□□ 2.22
Cdx1-201ENSMUST00000025521 Map4P27546 1125 aaKnown RBP28.91■■■□□ 2.22
Cdx1-201ENSMUST00000025521 Stra8P70278 393 aa28.9■■■□□ 2.22
Cdx1-201ENSMUST00000025521 Igf1rQ60751 1373 aa28.9■■■□□ 2.22
Cdx1-201ENSMUST00000025521 Asxl1P59598 1514 aa28.89■■■□□ 2.21
Cdx1-201ENSMUST00000025521 Dot1lQ6XZL8 1540 aa28.89■■■□□ 2.21
Cdx1-201ENSMUST00000025521 Mug2P28666 1451 aa28.86■■■□□ 2.21
Cdx1-201ENSMUST00000025521 Iqgap1Q9JKF1 1657 aaKnown RBP28.86■■■□□ 2.21
Cdx1-201ENSMUST00000025521 Sart1Q9Z315 806 aaKnown RBP28.85■■■□□ 2.21
Cdx1-201ENSMUST00000025521 Rock1P70335 1354 aa28.85■■■□□ 2.21
Cdx1-201ENSMUST00000025521 Kidins220E9Q9B7 1793 aa28.85■■■□□ 2.21
Cdx1-201ENSMUST00000025521 Abca17E9PX95 1733 aa28.83■■■□□ 2.21
Cdx1-201ENSMUST00000025521 Cpsf1Q9EPU4 1441 aaKnown RBP28.83■■■□□ 2.2
Cdx1-201ENSMUST00000025521 Prdm16A2A935 1275 aa28.82■■■□□ 2.2
Cdx1-201ENSMUST00000025521 Myom3A2ABU4 1439 aa28.8■■■□□ 2.2
Cdx1-201ENSMUST00000025521 Dapk1Q80YE7 1442 aa28.8■■■□□ 2.2
Cdx1-201ENSMUST00000025521 AI481877A2ALV5 1481 aa28.8■■■□□ 2.2
Cdx1-201ENSMUST00000025521 Rrp7aQ9D1C9 280 aaKnown RBP28.8■■■□□ 2.2
Cdx1-201ENSMUST00000025521 Naip6Q9JIB6 1403 aa28.79■■■□□ 2.2
Cdx1-201ENSMUST00000025521 Cwc22Q8C5N3 908 aaKnown RBP28.78■■■□□ 2.2
Cdx1-201ENSMUST00000025521 Robo2Q7TPD3 1470 aa28.78■■■□□ 2.2
Cdx1-201ENSMUST00000025521 Rgl3Q3UYI5 709 aa28.76■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Ppip5k1A2ARP1 1436 aa28.76■■■□□ 2.19
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms