RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Kdm6bQ5NCY0 1641 aa29,7■■■□□ 2,35
Cdx1-201ENSMUST00000025521 Chic2Q9D9G3 165 aa29,67■■■□□ 2,34
Cdx1-201ENSMUST00000025521 Fam163aQ8CAA5 168 aa29,67■■■□□ 2,34
Cdx1-201ENSMUST00000025521 Hspa5P20029 655 aaKnown RBP29,63■■■□□ 2,33
Cdx1-201ENSMUST00000025521 Lamc1P02468 1607 aaKnown RBP29,63■■■□□ 2,33
Cdx1-201ENSMUST00000025521 Il16O54824 1322 aa29,63■■■□□ 2,33
Cdx1-201ENSMUST00000025521 Kdm3bQ6ZPY7 1562 aa29,62■■■□□ 2,33
Cdx1-201ENSMUST00000025521 Naip5Q9R016 1403 aa29,62■■■□□ 2,33
Cdx1-201ENSMUST00000025521 Kif21bQ9QXL1 1668 aa29,6■■■□□ 2,33
Cdx1-201ENSMUST00000025521 SphkapQ6NSW3 1687 aa29,6■■■□□ 2,33
Cdx1-201ENSMUST00000025521 Arhgef12Q8R4H2 1543 aaKnown RBP29,6■■■□□ 2,33
Cdx1-201ENSMUST00000025521 Nop58Q6DFW4 536 aaKnown RBP29,59■■■□□ 2,33
Cdx1-201ENSMUST00000025521 Mtus2Q3UHD3 1353 aa29,58■■■□□ 2,33
Cdx1-201ENSMUST00000025521 Prex2Q3LAC4 1598 aa29,57■■■□□ 2,32
Cdx1-201ENSMUST00000025521 Cabp1Q9JLK7 227 aa29,57■■■□□ 2,32
Cdx1-201ENSMUST00000025521 Mlh3A0A1Y7VMP7 1443 aa29,56■■■□□ 2,32
Cdx1-201ENSMUST00000025521 Neo1P97798 1493 aa29,56■■■□□ 2,32
Cdx1-201ENSMUST00000025521 Cdk11bP24788 784 aaKnown RBP29,55■■■□□ 2,32
Cdx1-201ENSMUST00000025521 NclP09405 707 aaKnown RBP29,54■■■□□ 2,32
Cdx1-201ENSMUST00000025521 Caskin1Q6P9K8 1431 aa29,53■■■□□ 2,32
Cdx1-201ENSMUST00000025521 Ppargc1bQ8VHJ7 1014 aa29,53■■■□□ 2,32
Cdx1-201ENSMUST00000025521 Mphosph9A6H5Y1 991 aa29,52■■■□□ 2,32
Cdx1-201ENSMUST00000025521 Fgd6Q69ZL1 1399 aa29,51■■■□□ 2,32
Cdx1-201ENSMUST00000025521 Gm13697A2AK42 830 aa29,5■■■□□ 2,31
Cdx1-201ENSMUST00000025521 Ube2uB1AUC4 352 aa29,49■■■□□ 2,31
Cdx1-201ENSMUST00000025521 Fam208aQ69ZR9 1610 aaKnown RBP29,48■■■□□ 2,31
Cdx1-201ENSMUST00000025521 Anks4bQ8K3X6 423 aa29,48■■■□□ 2,31
Cdx1-201ENSMUST00000025521 Jph4Q80WT0 628 aa29,47■■■□□ 2,31
Cdx1-201ENSMUST00000025521 Fancd2Q80V62 1450 aa29,46■■■□□ 2,31
Cdx1-201ENSMUST00000025521 AlkP97793 1621 aa29,44■■■□□ 2,3
Cdx1-201ENSMUST00000025521 Adgrb2Q8CGM1 1561 aa29,41■■■□□ 2,3
Cdx1-201ENSMUST00000025521 Rprd2Q6NXI6 1469 aaKnown RBP29,41■■■□□ 2,3
Cdx1-201ENSMUST00000025521 Kiaa1210E9Q0C6 1637 aa29,38■■■□□ 2,29
Cdx1-201ENSMUST00000025521 Fmn2Q9JL04 1578 aa29,35■■■□□ 2,29
Cdx1-201ENSMUST00000025521 AknaQ80VW7 1404 aa29,35■■■□□ 2,29
Cdx1-201ENSMUST00000025521 Pik3c2gO70167 1506 aa29,33■■■□□ 2,29
Cdx1-201ENSMUST00000025521 Rnf17Q99MV7 1640 aa29,33■■■□□ 2,29
Cdx1-201ENSMUST00000025521 Trpm2Q91YD4 1506 aa29,33■■■□□ 2,29
Cdx1-201ENSMUST00000025521 Pdcd11Q6NS46 1862 aaKnown RBP29,32■■■□□ 2,28
Cdx1-201ENSMUST00000025521 Pprc1Q6NZN1 1644 aa29,32■■■□□ 2,28
Cdx1-201ENSMUST00000025521 Wdr7Q920I9 1489 aa29,3■■■□□ 2,28
Cdx1-201ENSMUST00000025521 Gm14025A2AP89 1413 aa29,3■■■□□ 2,28
Cdx1-201ENSMUST00000025521 Chd1P40201 1711 aa29,3■■■□□ 2,28
Cdx1-201ENSMUST00000025521 Tdrd9Q14BI7 1383 aa29,29■■■□□ 2,28
Cdx1-201ENSMUST00000025521 Zfp644E9QA22 1323 aa29,28■■■□□ 2,28
Cdx1-201ENSMUST00000025521 Pkd2O35245 966 aa29,27■■■□□ 2,28
Cdx1-201ENSMUST00000025521 Usp47Q8BY87 1376 aa29,27■■■□□ 2,28
Cdx1-201ENSMUST00000025521 Gm32742A0A1B0GT42 1604 aa29,26■■■□□ 2,27
Cdx1-201ENSMUST00000025521 NhsB1AV60 1647 aa29,26■■■□□ 2,27
Cdx1-201ENSMUST00000025521 Neurl4Q5NCX5 1563 aa29,25■■■□□ 2,27
Cdx1-201ENSMUST00000025521 Supt6hQ62383 1726 aaKnown RBP29,25■■■□□ 2,27
Cdx1-201ENSMUST00000025521 Adgrl2Q8JZZ7 1487 aa29,24■■■□□ 2,27
Cdx1-201ENSMUST00000025521 Mast1Q9R1L5 1570 aa29,23■■■□□ 2,27
Cdx1-201ENSMUST00000025521 Abcc1O35379 1528 aa29,2■■■□□ 2,27
Cdx1-201ENSMUST00000025521 DroshaQ5HZJ0 1373 aaKnown RBP29,2■■■□□ 2,27
Cdx1-201ENSMUST00000025521 Cfap74Q3UY96 1578 aa29,2■■■□□ 2,26
Cdx1-201ENSMUST00000025521 Hecw1Q8K4P8 1604 aa29,17■■■□□ 2,26
Cdx1-201ENSMUST00000025521 Arhgap5P97393 1501 aa29,13■■■□□ 2,25
Cdx1-201ENSMUST00000025521 Abca8bQ8K440 1620 aa29,1■■■□□ 2,25
Cdx1-201ENSMUST00000025521 Lrrc9Q8CDN9 1456 aa29,1■■■□□ 2,25
Cdx1-201ENSMUST00000025521 Kif14L0N7N1 1674 aaKnown RBP29,1■■■□□ 2,25
Cdx1-201ENSMUST00000025521 Ttll5Q8CHB8 1328 aa29,07■■■□□ 2,24
Cdx1-201ENSMUST00000025521 Fkbp15Q6P9Q6 1216 aaKnown RBP29,07■■■□□ 2,24
Cdx1-201ENSMUST00000025521 Nup155Q99P88 1391 aaKnown RBP29,07■■■□□ 2,24
Cdx1-201ENSMUST00000025521 Mbd5B1AYB6 1498 aa29,06■■■□□ 2,24
Cdx1-201ENSMUST00000025521 Abcc3B2RX12 1523 aa29,04■■■□□ 2,24
Cdx1-201ENSMUST00000025521 Ncoa1P70365 1447 aa29,02■■■□□ 2,24
Cdx1-201ENSMUST00000025521 Dhx9O70133 1380 aaKnown RBP29■■■□□ 2,23
Cdx1-201ENSMUST00000025521 PtprgQ05909 1442 aa28,99■■■□□ 2,23
Cdx1-201ENSMUST00000025521 Trappc8E9PWG2 1437 aa28,97■■■□□ 2,23
Cdx1-201ENSMUST00000025521 Sin3aQ60520 1274 aaKnown RBP28,96■■■□□ 2,23
Cdx1-201ENSMUST00000025521 Ssh2Q5SW75 1423 aa28,96■■■□□ 2,23
Cdx1-201ENSMUST00000025521 Cdc42bpbQ7TT50 1713 aa28,95■■■□□ 2,23
Cdx1-201ENSMUST00000025521 Smg6P61406 1418 aaKnown RBP28,93■■■□□ 2,22
Cdx1-201ENSMUST00000025521 Atp10dQ8K2X1 1416 aa28,93■■■□□ 2,22
Cdx1-201ENSMUST00000025521 Trak1Q6PD31 939 aa28,93■■■□□ 2,22
Cdx1-201ENSMUST00000025521 Clstn2Q9ER65 966 aa28,92■■■□□ 2,22
Cdx1-201ENSMUST00000025521 Mapk8ip2Q9ERE9 830 aa28,92■■■□□ 2,22
Cdx1-201ENSMUST00000025521 Map4P27546 1125 aaKnown RBP28,91■■■□□ 2,22
Cdx1-201ENSMUST00000025521 Stra8P70278 393 aa28,9■■■□□ 2,22
Cdx1-201ENSMUST00000025521 Igf1rQ60751 1373 aa28,9■■■□□ 2,22
Cdx1-201ENSMUST00000025521 Asxl1P59598 1514 aa28,89■■■□□ 2,21
Cdx1-201ENSMUST00000025521 Dot1lQ6XZL8 1540 aa28,89■■■□□ 2,21
Cdx1-201ENSMUST00000025521 Mug2P28666 1451 aa28,86■■■□□ 2,21
Cdx1-201ENSMUST00000025521 Iqgap1Q9JKF1 1657 aaKnown RBP28,86■■■□□ 2,21
Cdx1-201ENSMUST00000025521 Sart1Q9Z315 806 aaKnown RBP28,85■■■□□ 2,21
Cdx1-201ENSMUST00000025521 Rock1P70335 1354 aa28,85■■■□□ 2,21
Cdx1-201ENSMUST00000025521 Kidins220E9Q9B7 1793 aa28,85■■■□□ 2,21
Cdx1-201ENSMUST00000025521 Abca17E9PX95 1733 aa28,83■■■□□ 2,21
Cdx1-201ENSMUST00000025521 Cpsf1Q9EPU4 1441 aaKnown RBP28,83■■■□□ 2,2
Cdx1-201ENSMUST00000025521 Prdm16A2A935 1275 aa28,82■■■□□ 2,2
Cdx1-201ENSMUST00000025521 Myom3A2ABU4 1439 aa28,8■■■□□ 2,2
Cdx1-201ENSMUST00000025521 Dapk1Q80YE7 1442 aa28,8■■■□□ 2,2
Cdx1-201ENSMUST00000025521 AI481877A2ALV5 1481 aa28,8■■■□□ 2,2
Cdx1-201ENSMUST00000025521 Rrp7aQ9D1C9 280 aaKnown RBP28,8■■■□□ 2,2
Cdx1-201ENSMUST00000025521 Naip6Q9JIB6 1403 aa28,79■■■□□ 2,2
Cdx1-201ENSMUST00000025521 Cwc22Q8C5N3 908 aaKnown RBP28,78■■■□□ 2,2
Cdx1-201ENSMUST00000025521 Robo2Q7TPD3 1470 aa28,78■■■□□ 2,2
Cdx1-201ENSMUST00000025521 Rgl3Q3UYI5 709 aa28,76■■■□□ 2,19
Cdx1-201ENSMUST00000025521 Ppip5k1A2ARP1 1436 aa28,76■■■□□ 2,19
Retrieved 100 of 22,080 RNA–protein pairs in 37,6 ms